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Aliases & Descriptions for ZAP70
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases EC 2.7.10.2 3 FLJ17670 2 FLJ17679 2 SRK 2 , 3 , 5 STD 1 , 2 , 5 TZK 2 ZAP-70 1 , 2
Descriptions 70 kDa zeta-associated protein 3 Syk-related tyrosine kinase 2 , 3 zeta-chain (TCR) associated protein kinase (70 kD) 1 , 2 zeta-chain (TCR) associated protein kinase 70kDa 2 zeta-chain associated protein kinase 70kDa 2 zeta-chain associated protein kinase, 70kD 2
Search outside databases for aliases for ZAP70 genePrevious GC identifers: GC02P096211 GC02P096782 GC02P097934 GC02P097951
Summaries for ZAP70 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for ZAP70 : This gene encodes an enzyme belonging to the protein tyrosine kinase family, and it plays a role inT-cell development and lymphocyte activation. This enzyme, which is phosphorylated on tyrosineresidues upon T-cell antigen receptor (TCR) stimulation, functions in the initial step ofTCR-mediated signal transduction in combination with the Src family kinases, Lck and Fyn. Thisenzyme is also essential for thymocyte development. Mutations in this gene cause selective T-celldefect, a severe combined immunodeficiency disease characterized by a selective absence ofCD8-positive T-cells. Two transcript variants that encode different isoforms have been found forthis gene. [provided by RefSeq] UniProtKB/Swiss-Prot: ZAP70_HUMAN, P43403 Function : Plays a role in T-cell development and lymphocyte activation. Essential for TCR-mediatedIL-2 production. Isoform 1 induces TCR-mediated signal transduction, isoform 2 does not
Gene Wiki entry for ZAP70 (ZAP-70)
Genomic Location for ZAP70
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the ZAP70 gene Entrez Gene cytogenetic band: 2q12 Ensembl cytogenetic band: 2q11.2 HGNC cytogenetic band: 2q11-q13 ZAP70 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02P097788:
(about GC identifiers )
Start:
97,696,463 bp from pter
End:
97,722,755 bp from pter
Size:
26,293 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000002.10 NT_022171.14 Proteins for ZAP70
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: ZAP70_HUMAN, P43403 (See
protein sequence )Recommended Name: Tyrosine-protein kinase ZAP-70 Size : 619 amino acids; 69872 Da
Subunit : Interacts with SLA2 when it is phosphorylated. Interacts with CD3Z and with phosphorylatedNFAM1. Interacts with CBLB (By similarity). Interacts with CBL and SLA when it is phosphorylated.The association with SLA (or SLA2) and CBL probably leads to its destruction. Interacts with SHB.Interacts with DEF6 (By similarity). Interacts with FCRL3
Subcellular location : Cytoplasm (By similarity). Note=After antigen stimulation, isoform 1concentrates at the immunological synapse and isoform 2 remains cytoplasmic (By similarity)
PDB structures from and Proteopedia : 1M61 (3D)
 1U59 (3D)
 2OQ1 (3D)
 2OZO (3D)
 
Secondary accessions : A6NFP4 Q6PIA4 Q8IXD6 Q9UBS6Alternative splicing : 3 isoforms : P43403-1 P43403-2 P43403-3
Post-translational modifications:
Phosphorylated on tyrosine residues upon T-cell antigen receptor (TCR) stimulation. Tyr-319phosphorylation is essential for full activity1
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001070.2 NP_997402.1 ENSEMBL proteins: ENSP00000264972 ENSP00000374169 Human Recombinant Proteins Invitrogen human recombinant proteins for ZAP70 Millipore Purified and/or Recombinant ZAP70 Protein Sigma-Aldrich Proteins for ZAP70 R&D Systems Recombinant & Natural Proteins for ZAP70 Enzo Life Sciences proteins for ZAP70 Recombinant Proteins from Abcam (ZAP70 ) Human Recombinant Proteins from Abnova (ZAP70 )
Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 5 Gene Ontology (GO) cellular component terms (links to tree view) :
About this table Antibodies for ZAP70: Invitrogen Antibodies for ZAP70 Millipore Mono- and Polyclonal Antibodies for the study of ZAP70 Sigma-Aldrich Antibody Arrays and Antibodies for ZAP70 R&D Systems Antibodies for ZAP70 Cell Signaling Technology (CST) Antibodies for ZAP70   (Zap-70) Antibodies from Abcam (ZAP70 ), each with their Abpromise SM Monoclonal and Polyclonal Antibodies from Abnova (ZAP70 ) Novus Biologicals Antibodies for ZAP70
Assays for ZAP70:
Protein
Domains/ Families for ZAP70(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P43403 ProtoNet protein and cluster: P43403
2 Blocks protein families : IPB000980 SH2 domain signature IPB008266 Tyrosine protein kinase UniProtKB/Swiss-Prot: ZAP70_HUMAN, P43403 Domain : The SH2 domain binds to the phosphorylated tyrosine-based activation motif (TAM) of CD3ZSimilarity : Belongs to the protein kinase superfamily. Tyr protein kinase family. SYK/ZAP-70subfamily Similarity : Contains 1 protein kinase domainSimilarity : Contains 2 SH2 domains
Gene Function for ZAP70
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (ZAP70 ) Millipore RNAi Products for the Analysis of ZAP70 Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (ZAP70 )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_207519 Applied Biosystems Silencer ® siRNAs for ZAP70 Sigma-Aldrich siRNA and siRNA Panels for ZAP70 Sigma-Aldrich shRNA Panels and shRNA for ZAP70 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001079                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001079                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001079  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001079 UniProtKB/Swiss-Prot: ZAP70_HUMAN, P43403 Function : Plays a role in T-cell development and lymphocyte activation. Essential for TCR-mediatedIL-2 production. Isoform 1 induces TCR-mediated signal transduction, isoform 2 does not Catalytic activity : ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphateEnzyme Number (IUBMB): EC 2.7.10.2
Genatlas biochemistry entry for ZAP70 :CD3 zeta associated tyrosine kinase,SYK (non SRC) family,expressed in T and NK cells,involved insignal transduction
6 MGI mutant phenotypes (inferred from 9 alleles ) (MGI details for Zap70) :5 Gene Ontology (GO) molecular function terms (links to tree view) :
About this table
Pathways & Interactions for ZAP70
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/9 Sigma-Aldrich "Your Favorite Gene" Pathways for ZAP70 (Your Favorite Gene powered by Ingenuity) (see all 9
) Gene Network CentralTM Interacting Genes and Proteins Network for ZAP70 5/122 Interacting proteins for ZAP70 (ENSP00000264972 3 P43403 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 122
)About this table 5/6 Gene Ontology (GO) biological process terms (links to tree view) (see all 6
):
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Drugs & Compounds for ZAP70 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for ZAP70 10/22 Novoseek chemical compound relationships for ZAP70 gene (see all 22
)
Compound
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
tyrosine
84.90
480
11744042 (8), 8530437 (5), 7760813 (5), 7642520 (5) (see all 99 )
phosphotyrosine
64.67
8
8196616 (1), 12356870 (1), 7822334 (1), 8520027 (1) (see all 7 )
piceatannol
51.75
3
17250586 (1), 9723676 (1)
calcium
32.72
19
10748099 (1), 19018007 (1), 8096851 (1), 11588032 (1) (see all 18 )
phosphatidylinositol
31.33
7
15100278 (2), 8096851 (1), 9195899 (1), 11418612 (1) (see all 6 )
phenylalanine
22.07
6
10779765 (1), 10318843 (1), 11046020 (1), 15100278 (1) (see all 6 )
purine
14.91
2
19373658 (1), 17051411 (1)
threonine
9.40
4
16369048 (1), 10725390 (1)
sodium
2.95
1
11566569 (1)
oxygen
0.82
1
11744042 (1)
About this table
Transcripts for ZAP70(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
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OriGene , Expression Assays from Applied Biosystems )About This Section
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Inhib. RNA: Invitrogen RNAi Products for gene knock-down (ZAP70 ) Millipore RNAi Products for the Analysis of ZAP70 Gene knock-down Abnova Chimera RNAi Products for Gene knock-down (ZAP70 )
               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_207519 Sigma-Aldrich siRNA and siRNA Panels for ZAP70 Sigma-Aldrich shRNA Panels and shRNA for ZAP70 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001079 NM_207519
REFSEQ mRNAs for ZAP70 gene (2 alternative transcripts): NM_001079.3 NM_207519.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001079 NM_207519
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001079                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001079                                  untagged cDNA clones in CMV expression vector (see all 3 ): NM_001079  
Additional cDNA sequence: AB083211.1 AK303341.1 AK310637.1 BC039039.1 BC053878.1 L05148.1
8 DOTS entries : DT.302578 DT.100019754 DT.100019752 DT.95142057 DT.100019753 DT.100750057 DT.100727964 DT.97782684
24/54 AceView cDNA sequences (see all 54
):NM_207519 BC039039 BQ054223 BE254072 L05148 AI473901 AJ346204 BX092836 BM916976 AB083211 BQ051966 AI382267 AL832287 AA353108 NM_001079 BC053878 BM917637 T28969 AW448979 BQ436251 AI817942 BX436681 BQ053003 BI826450
highest scoring ESTs for ZAP70 :L05148 AA353108 AB083211 AI382267 AI473901 AI817942 AJ346204 AJ573211 AJ713075 AL832287
Unigene Cluster for ZAP70: Zeta-chain (TCR) associated protein kinase 70kDa Hs.234569 [show with all ESTs ] Unigene Representative Sequence: BC053878 GeneLoc Exon Structure 5/9 Alternative Splicing Database (ASD) splice patterns (SP) for ZAP70 (see all 9
) ExUns: 1 ^ 2a · 2b ^ 3a · 3b ^ 4 ^ 5 ^ 6 ^ 7 ^ 8a · 8b ^ 9 ^ 10 ^ 11 ^ 12a · 12b · 12c ^ 13a · 13b ^ 14 ^ 15a · 15b ^ 16a · 16b · 16c ^ 17a · SP1 :   -         -   -     -             -       -               -     SP2 :                 -             -       -               -     SP3 :                                                 -     SP4 :                 -             -   -                       SP5 :                                   -               -    
About this scheme ECgene alternative splicing isoforms for ZAP70 2 Ensembl transcripts including schematic representations : ENST00000264972
ENST00000389518
Expression for ZAP70
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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ZAP70 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for ZAP70 1 / 2 / 3
4 probe-sets matching ZAP70 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: CGAGCCTGTTSOURCE GeneReport for Unigene cluster: Hs.234569 Expression variation in blood from EXPOLDB for ZAP70
UniProtKB/Swiss-Prot: ZAP70_HUMAN, P43403 Tissue specificity : Expressed in T- and natural killer cells
Orthologs for ZAP70
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for ZAP70 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for ZAP70 ENSEMBL Gene Tree for ZAP70 Paralogs for ZAP70 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for ZAP70 gene SYK 2 TNK2 2
SNPs/Variants for ZAP70 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for ZAP70 (up to first 250kb)
Disorders & Mutations for ZAP70
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 176947 UniProtKB/Swiss-Prot: ZAP70_HUMAN, P43403
Defects in ZAP70 are the cause of selective T-cell defect (STD) [MIM:176947]. STD is anautosomal recessive form of severe combined immunodeficiency characterized by a selective absenceof CD8-type T-cells
10/42 Novoseek disease relationships for ZAP70 gene (see all 42
)
Disease
Score
Articles
PubMed IDs for Articles with Shared Sentences (# sentences)
leukemia lymphocytic chronic
90.83
82
15972449 (2), 16418492 (2), 16321853 (2), 17948236 (2) (see all 62 )
lymphocytic leukemia chronic b-cell
87.67
40
18223290 (4), 15759031 (2), 17476690 (2), 16906587 (2) (see all 28 )
leukaemia lymphocytic
76.05
31
16932341 (2), 17456058 (2), 19144411 (2), 17625948 (2) (see all 21 )
severe combined immunodeficiency
57.75
10
8202712 (2), 9801260 (1), 12149205 (1), 8920891 (1) (see all 9 )
lymphoma small lymphocytic
52.03
5
15133473 (1), 16280661 (1), 16426914 (1), 18348159 (1) (see all 5 )
lymphocytosis
49.21
1
18689273 (1)
leukemia b-cell
48.49
3
14523469 (1), 12393534 (1), 17051411 (1)
trisomy
47.92
5
16434371 (1), 18223290 (1), 18689273 (1), 17143256 (1) (see all 5 )
leukemia t-cell
43.13
7
17178387 (2), 7524094 (1), 16369048 (1), 18687687 (1)
leukemia prolymphocytic
40.14
2
15133473 (1), 16642047 (1)
About this table Genatlas disease: ZAP70 immunodeficiency,severe,combined with selective absence of peripheral CD8+ cells,and presence ofCD4+ T cells,not responding to TCR mediated stimuli in vitro Human Gene Mutation Database : ZAP70 Tumor Gene Database : ZAP70
Medical News for ZAP70 (Possibly Related Articles in
Doctor's Guide )
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Publications for ZAP70 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/573 PubMed articles for ZAP70 gene (see all 573
): ZAP-70: a 70 kd protein-tyrosine kinase that associates with the TCR zeta chain. (PubMed id 1423621) 1, 2, 3, 4 Chan A.C....Weiss A. (1992) Identification of a novel isoform of ZAP-70, truncated ZAP kinase. (PubMed id 14985102) 1, 3, 4 Kuroyama H.... Hirokawa K. (2004) ZAP-70 binding specificity to T cell receptor tyrosine-based activation motifs: the tandem SH2 domains of ZAP-70 bind distinct tyrosine-based activation motifs with varying affinity. (PubMed id 7528772) 1, 3, 4 Isakov N....Samelson L.E. (1995) Proteomics analysis of protein kinases by target class-selective prefractionation and tandem mass spectrometry. (PubMed id 17192257) 3, 4 Wissing J.... Daub H. (2007) Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry. (PubMed id 16094384) 3, 4 Tao W.A.... Aebersold R. (2005) Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455) 3, 4 Rush J.... Comb M.J. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 3, 4 Gerhard D.S....Malek J. (2004) Robust phosphoproteomic profiling of tyrosine phosphorylation sites from human T cells using immobilized metal affinity chromatography and tandem mass spectrometry. (PubMed id 15144186) 3, 4 Brill L.M....Peters E.C. (2004) Profiling of tyrosine phosphorylation pathways in human cells using mass spectrometry. (PubMed id 12522270) 3, 4 Salomon A.R.... Peters E.C. (2003) Crystal structure and NMR studies of the apo SH2 domains of ZAP-70: two bikes rather than a tandem. (PubMed id 12450381) 3, 4 Folmer R.H.... Xue Y. (2002)
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Genome Databases showing ZAP70
(According to
Entrez Gene ,
HGNC ,
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Other Databases showing ZAP70
(According to HUGE )
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--
Specialized Databases showing ZAP70 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for ZAP70 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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Products for ZAP70:
Antibodies & Assays for ZAP70   (Zap-70)
Search Tocris compounds for ZAP70
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009