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YWHAEP7 Gene(Pseudogene)

Tyrosine 3-Monooxygenase/Tryptophan 5-Monooxygenase Activation Protein Epsilon Pseudogene 7

GCID:
GC17M037828
GIFtS:
15

Aliases for YWHAEP7 Gene

Aliases for YWHAEP7 Gene

  • Tyrosine 3-Monooxygenase/Tryptophan 5-Monooxygenase Activation Protein Epsilon Pseudogene 7 2 3 5

External Ids for YWHAEP7 Gene

Previous GeneCards Identifiers for YWHAEP7 Gene

  • GC17M036189

Summaries for YWHAEP7 Gene

GeneCards Summary for YWHAEP7 Gene

YWHAEP7 (Tyrosine 3-Monooxygenase/Tryptophan 5-Monooxygenase Activation Protein Epsilon Pseudogene 7) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for YWHAEP7 Gene

Genomics for YWHAEP7 Gene

Regulatory Elements for YWHAEP7 Gene

Enhancers for YWHAEP7 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH17G037849 1.5 FANTOM5 Ensembl ENCODE 0.3 +35.3 35335 0.4 HDGF PKNOX1 ATF1 INSM2 KLF17 RAD21 ZEB1 ZNF366 FOS RELB PIR34199 YWHAEP7
GH17G037853 0.4 dbSUPER 0.3 +30.7 30744 1.8 PRDM1 TBC1D3 PIR34199 YWHAEP7
GH17G037856 0.4 dbSUPER 0.3 +27.8 27820 1.4 CEBPB CEBPG PIR34199 YWHAEP7
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around YWHAEP7 on UCSC Golden Path with GeneCards custom track

Genomic Location for YWHAEP7 Gene

Chromosome:
17
Start:
37,828,305 bp from pter
End:
37,884,743 bp from pter
Size:
56,439 bases
Orientation:
Minus strand

Genomic View for YWHAEP7 Gene

Genes around YWHAEP7 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YWHAEP7 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YWHAEP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YWHAEP7 Gene

Proteins for YWHAEP7 Gene

Post-translational modifications for YWHAEP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for YWHAEP7 Gene

Domains & Families for YWHAEP7 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for YWHAEP7 Gene

Function for YWHAEP7 Gene

Phenotypes for YWHAEP7 Gene

GenomeRNAi human phenotypes for YWHAEP7:
genes like me logo Genes that share phenotypes with YWHAEP7: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for YWHAEP7 Gene

Localization for YWHAEP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for YWHAEP7 Gene

Pathways & Interactions for YWHAEP7 Gene

SuperPathways for YWHAEP7 Gene

No Data Available

Interacting Proteins for YWHAEP7 Gene

Gene Ontology (GO) - Biological Process for YWHAEP7 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for YWHAEP7 Gene

Drugs & Compounds for YWHAEP7 Gene

No Compound Related Data Available

Transcripts for YWHAEP7 Gene

mRNA/cDNA for YWHAEP7 Gene

(1) REFSEQ mRNAs :
(16) Selected AceView cDNA sequences:
(3) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for YWHAEP7 Gene

No ASD Table

Relevant External Links for YWHAEP7 Gene

GeneLoc Exon Structure for
YWHAEP7
ECgene alternative splicing isoforms for
YWHAEP7

Expression for YWHAEP7 Gene

mRNA differential expression in normal tissues according to GTEx for YWHAEP7 Gene

This gene is overexpressed in Kidney - Cortex (x16.4), Testis (x11.3), Cervix - Endocervix (x9.1), and Pituitary (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of YWHAEP7 Gene:

YWHAEP7

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for YWHAEP7 Gene

Orthologs for YWHAEP7 Gene

Evolution for YWHAEP7 Gene

ENSEMBL:
Gene Tree for YWHAEP7 (if available)
TreeFam:
Gene Tree for YWHAEP7 (if available)

No data available for Orthologs for YWHAEP7 Gene

Paralogs for YWHAEP7 Gene

No data available for Paralogs for YWHAEP7 Gene

Variants for YWHAEP7 Gene

Sequence variations from dbSNP and Humsavar for YWHAEP7 Gene

SNP ID Clin Chr 17 pos Sequence Context AA Info Type
rs1000015922 -- 37,873,309(+) AAAAA(A/G)TTTTT intron-variant
rs1000129093 -- 37,850,708(+) TTGAT(C/T)CATTT intron-variant
rs1000202886 -- 37,858,424(+) TGGGC(C/T)GGGCG intron-variant
rs1000382301 -- 37,862,949(+) GGTGA(C/T)GGACT intron-variant
rs1000426135 -- 37,842,783(+) TCAAC(C/T)AGAAA downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for YWHAEP7 Gene

Variant ID Type Subtype PubMed ID
dgv911e212 CNV gain 25503493
esv2758688 CNV gain+loss 17122850
esv3582628 CNV loss 25503493
esv3582629 CNV loss 25503493
esv3640507 CNV gain 21293372
esv3640512 CNV loss 21293372
nsv428341 CNV gain+loss 18775914
nsv574956 CNV gain 21841781
nsv574957 CNV gain 21841781
nsv574958 CNV loss 21841781
nsv833432 CNV gain+loss 17160897
nsv9544 CNV gain 18304495
nsv9545 CNV gain 18304495
nsv960477 CNV duplication 23825009

Relevant External Links for YWHAEP7 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
YWHAEP7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for YWHAEP7 Gene

Disorders for YWHAEP7 Gene

Relevant External Links for YWHAEP7

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
YWHAEP7

No disorders were found for YWHAEP7 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for YWHAEP7 Gene

Publications for YWHAEP7 Gene

  1. LncRNAs expression in preeclampsia placenta reveals the potential role of LncRNAs contributing to preeclampsia pathogenesis. (PMID: 24312300) He X. … Liu H. (PLoS ONE 2013) 2 3 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 64
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for YWHAEP7 Gene

Sources for YWHAEP7 Gene

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