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Aliases for YTHDF3-AS1 Gene

Subcategory (RNA class) for YTHDF3-AS1 Gene


Quality Score for this RNA gene is


Aliases for YTHDF3-AS1 Gene

  • YTHDF3 Antisense RNA 1 (Head To Head) 2 3 5

External Ids for YTHDF3-AS1 Gene

ORGUL Members for YTHDF3-AS1 Gene

Previous GeneCards Identifiers for YTHDF3-AS1 Gene

  • GC08M064080

Summaries for YTHDF3-AS1 Gene

GeneCards Summary for YTHDF3-AS1 Gene

YTHDF3-AS1 (YTHDF3 Antisense RNA 1 (Head To Head)) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for YTHDF3-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for YTHDF3-AS1 Gene

Genomics for YTHDF3-AS1 Gene

Regulatory Elements for YTHDF3-AS1 Gene

Enhancers for YTHDF3-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H063166 1.4 FANTOM5 ENCODE 6.6 +0.0 19 4 HDGF PKNOX1 MLX ARNT ARID4B SIN3A FEZF1 DMAP1 ZBTB7B YY1 YTHDF3 YTHDF3-AS1 GC08P063153 GC08P063154 PIR39522 GC08P063158 GC08P063157 GC08P063156 GC08P063155
GH08H063218 1.1 Ensembl ENCODE 4.7 -51.9 -51887 3.5 PKNOX1 SIN3A BRCA1 ZEB1 RFX5 ZNF366 ZSCAN5C RCOR1 FOS DEK YTHDF3-AS1 ENSG00000261542 RN7SL135P
GH08H063222 0.8 Ensembl ENCODE 4.7 -54.0 -53959 0.4 CTCF ZNF654 SMC3 ZNF143 ZNF384 RAD21 YTHDF3-AS1 ENSG00000261542 RN7SL135P
GH08H063191 0.5 Ensembl 4.2 -23.8 -23759 1.2 POLR2A IKZF1 RUNX3 IKZF2 YTHDF3-AS1 ENSG00000261542 YTHDF3
GH08H063316 0.2 ENCODE 5.7 -149.1 -149122 2.3 YTHDF3-AS1 LOC105375873 IFITM8P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around YTHDF3-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for YTHDF3-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Locations for YTHDF3-AS1 Gene

Genomic Locations for YTHDF3-AS1 Gene
718 bases
Minus strand

Genomic View for YTHDF3-AS1 Gene

Genes around YTHDF3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YTHDF3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YTHDF3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YTHDF3-AS1 Gene

Proteins for YTHDF3-AS1 Gene

Post-translational modifications for YTHDF3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for YTHDF3-AS1 Gene

Domains & Families for YTHDF3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for YTHDF3-AS1 Gene

Function for YTHDF3-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for YTHDF3-AS1 Gene

Localization for YTHDF3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for YTHDF3-AS1 Gene

Pathways & Interactions for YTHDF3-AS1 Gene

SuperPathways for YTHDF3-AS1 Gene

No Data Available

Interacting Proteins for YTHDF3-AS1 Gene

Gene Ontology (GO) - Biological Process for YTHDF3-AS1 Gene


No data available for Pathways by source and SIGNOR curated interactions for YTHDF3-AS1 Gene

Drugs & Compounds for YTHDF3-AS1 Gene

No Compound Related Data Available

Transcripts for YTHDF3-AS1 Gene

mRNA/cDNA for YTHDF3-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for YTHDF3-AS1 Gene

No ASD Table

Relevant External Links for YTHDF3-AS1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for YTHDF3-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for YTHDF3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for YTHDF3-AS1 Gene

This gene is overexpressed in Testis (x4.1).
genes like me logo Genes that share expression patterns with YTHDF3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for YTHDF3-AS1 Gene

Orthologs for YTHDF3-AS1 Gene

Evolution for YTHDF3-AS1 Gene

Gene Tree for YTHDF3-AS1 (if available)
Gene Tree for YTHDF3-AS1 (if available)

No data available for Orthologs for YTHDF3-AS1 Gene

Paralogs for YTHDF3-AS1 Gene

No data available for Paralogs for YTHDF3-AS1 Gene

Variants for YTHDF3-AS1 Gene

Sequence variations from dbSNP and Humsavar for YTHDF3-AS1 Gene

SNP ID Clin Chr 08 pos Sequence Context AA Info Type
rs1001090929 -- 63,168,918(+) GAGGC(C/T)CCAGG intron-variant, upstream-variant-2KB
rs1001122030 -- 63,168,672(+) CGAGA(C/G)GGGGA nc-transcript-variant, upstream-variant-2KB, utr-variant-5-prime
rs1002091568 -- 63,169,860(+) ATTCT(A/G)TTGAA intron-variant, upstream-variant-2KB
rs1002883763 -- 63,169,023(+) GCGCA(A/G)GTTGC intron-variant, upstream-variant-2KB, utr-variant-5-prime
rs1004001362 -- 63,167,523(+) TTAAA(A/C)ATGCC intron-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for YTHDF3-AS1 Gene

Variant ID Type Subtype PubMed ID
nsv611448 CNV loss 21841781

Relevant External Links for YTHDF3-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for YTHDF3-AS1 Gene

Disorders for YTHDF3-AS1 Gene

Relevant External Links for YTHDF3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for YTHDF3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for YTHDF3-AS1 Gene

Publications for YTHDF3-AS1 Gene

No publications were found for YTHDF3-AS1 Gene.

Products for YTHDF3-AS1 Gene

Sources for YTHDF3-AS1 Gene

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