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Aliases for YRDCP3 Gene

Subcategory (RNA class) for YRDCP3 Gene


Aliases for YRDCP3 Gene

  • YrdC N(6)-Threonylcarbamoyltransferase Domain Containing Pseudogene 3 2 3 5
  • YrdC Domain Containing (E. Coli) Pseudogene 3 2

External Ids for YRDCP3 Gene

ORGUL Members for YRDCP3 Gene

Previous GeneCards Identifiers for YRDCP3 Gene

  • GC00U933478
  • GC21P042236

Summaries for YRDCP3 Gene

GeneCards Summary for YRDCP3 Gene

YRDCP3 (YrdC N(6)-Threonylcarbamoyltransferase Domain Containing Pseudogene 3) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for YRDCP3 Gene

Genomics for YRDCP3 Gene

Regulatory Elements for YRDCP3 Gene

Enhancers for YRDCP3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH21F040886 0.5 ENCODE 0.3 +23.0 23040 1.3 CTCF PKNOX1 YBX1 ZIC2 RAD21 ZNF155 ZNF791 GLIS2 ZNF366 POLR2A PRDM15 YRDCP3 LINC00323
GH21F040936 1.1 ENCODE 0.2 +73.5 73488 2.5 CTCF KLF1 ZNF2 RAD21 GATA3 PATZ1 SMC3 ZNF600 CREM ZNF654 YRDCP3 LINC00323
GH21F040967 0.7 ENCODE 0.1 +104.0 103956 0.2 SMARCA4 YRDCP3 LINC00323
GH21F040976 0.4 ENCODE 0.1 +112.8 112833 1.0 GATA3 PKNOX1 HMBOX1 YRDCP3 LINC00323
GH21F041125 0.2 Ensembl 0.1 +261.1 261107 0.2 ZNF335 GLIS2 PHF8 FOXK2 TRIM22 ID3 LINC00323 BACE2 YRDCP3
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around YRDCP3 on UCSC Golden Path with GeneCards custom track

Genomic Location for YRDCP3 Gene

40,863,994 bp from pter
40,864,473 bp from pter
480 bases
Plus strand

Genomic View for YRDCP3 Gene

Genes around YRDCP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YRDCP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YRDCP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YRDCP3 Gene

Proteins for YRDCP3 Gene

Post-translational modifications for YRDCP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for YRDCP3 Gene

Domains & Families for YRDCP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for YRDCP3 Gene

Function for YRDCP3 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for YRDCP3 Gene

Localization for YRDCP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for YRDCP3 Gene

Pathways & Interactions for YRDCP3 Gene

SuperPathways for YRDCP3 Gene

No Data Available

Interacting Proteins for YRDCP3 Gene

Gene Ontology (GO) - Biological Process for YRDCP3 Gene


No data available for Pathways by source and SIGNOR curated interactions for YRDCP3 Gene

Transcripts for YRDCP3 Gene

mRNA/cDNA for YRDCP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for YRDCP3 Gene

No ASD Table

Relevant External Links for YRDCP3 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for YRDCP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for YRDCP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of YRDCP3 Gene:

genes like me logo Genes that share expression patterns with YRDCP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for YRDCP3 Gene

Orthologs for YRDCP3 Gene

Evolution for YRDCP3 Gene

Gene Tree for YRDCP3 (if available)
Gene Tree for YRDCP3 (if available)

No data available for Orthologs for YRDCP3 Gene

Paralogs for YRDCP3 Gene

No data available for Paralogs for YRDCP3 Gene

Variants for YRDCP3 Gene

Relevant External Links for YRDCP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for YRDCP3 Gene

Disorders for YRDCP3 Gene

No disorders were found for YRDCP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for YRDCP3 Gene

Publications for YRDCP3 Gene

  1. The DNA sequence of human chromosome 21. (PMID: 10830953) Hattori M. … Yaspo M.-L. (Nature 2000) 3 64

Products for YRDCP3 Gene

Sources for YRDCP3 Gene

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