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Aliases & Descriptions for YPEL5
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases CGI-127 1 , 2 OTTHUMP00000123521 2 OTTHUMP00000123522 2
Descriptions yippee protein 2 yippee-like 5 2 yippee-like 5 (Drosophila) 2
Search outside databases for aliases for YPEL5 genePrevious GC identifers: GC02P030345 GC02P030281
Summaries for YPEL5 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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Genomic Location for YPEL5
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the YPEL5 gene Entrez Gene cytogenetic band: 2p23.1 Ensembl cytogenetic band: 2p23.1 HGNC cytogenetic band: 2p23 YPEL5 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02P030223:
(about GC identifiers )
Start:
30,223,311 bp from pter
End:
30,236,903 bp from pter
Size:
13,593 bases
Orientation:
plus strand
RefSeq DNA sequence: NC_000002.10 NT_022184.14 Proteins for YPEL5
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: YPEL5_HUMAN, P62699 (See
protein sequence )Recommended Name: Protein yippee-like 5 Size : 121 amino acids; 13842 Da
Secondary accessions : Q65Z97 Q8R174 Q9D6M1 Q9UMX7 Q9Y3C9
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (4 alternative transcripts):
NP_001120871.1 NP_001120872.1 NP_001120873.1 NP_057145.1 ENSEMBL proteins: ENSP00000261353 ENSP00000385278 ENSP00000368834 ENSP00000383974 ENSP00000384140 ENSP00000368835 Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: YPEL5 Antibodies for YPEL5: Assays for YPEL5:
Protein
Domains/ Families for YPEL5(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry P62699 ProtoNet protein and cluster: P62699
1 Blocks protein family : IPB004910 Yippee-like protein UniProtKB/Swiss-Prot: YPEL5_HUMAN, P62699 Similarity : Belongs to the yippee family
Gene Function for YPEL5
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_016061 Applied Biosystems Silencer ® siRNAs for YPEL5 Sigma-Aldrich siRNA for YPEL5 Sigma-Aldrich shRNA for YPEL5 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_001127399                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_001127399                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_001127399  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001127401 Pathways & Interactions for YPEL5
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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Drugs & Compounds for YPEL5 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for YPEL5
Transcripts for YPEL5(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
Sigma-Aldrich ,
OriGene ,
Tagged/untagged cDNA clones from
OriGene , Expression Assays from Applied Biosystems )About This Section
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 4 ): NM_016061 Sigma-Aldrich siRNA for YPEL5 Sigma-Aldrich shRNA for YPEL5 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001127399 NM_001127400 NM_001127401 NM_016061
REFSEQ mRNAs for YPEL5 gene (4 alternative transcripts): NM_001127399.1 NM_001127400.1 NM_001127401.1 NM_016061.2
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001127399 NM_001127400 NM_001127401 NM_016061
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 4 ): NM_001127399                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 4 ): NM_001127399                                  untagged cDNA clones in CMV expression vector (see all 4 ): NM_001127399  
Additional cDNA sequence: AB098739.1 AF135161.1 AF151885.1 AF172940.1 AK025730.1 AK307099.1 AK311404.1 BC000836.1 BC047237.1 CR590716.1 CR612144.1 CR612194.1 CR615384.1 CR617186.1 CR617677.1 CR620890.1 CR622707.1 CR623255.1
24 DOTS entries : DT.319786 DT.100885434 DT.92448299 DT.100885436 DT.97767180 DT.92448297 DT.91664542 DT.92448301 DT.92448298 DT.120985340 DT.92448305 DT.95227142 DT.95369308 DT.120985374 DT.100885435 DT.120985324 DT.100885442 DT.120985371 DT.95369312 DT.101977220 DT.91817422 DT.92448302 DT.100885446 DT.91934924
24/522 AceView cDNA sequences (see all 522
):BM850701 BM856482 AA883267 BE675523 AA447847 AV682350 CR615384 BM664463 AI149536 AI458367 AA745603 CR617186 H24217 CR612144 AA152318 AV714538 AA621431 AI367687 BF589710 AI150177 AA682763 CR622707 AW074691 AA364531
highest scoring ESTs for YPEL5 :AA151651 AA027857 AA033645 AA055324 AA083837 AA115539 AA133758 AA152318 AA152423 AA165032
Unigene Cluster for YPEL5: Yippee-like 5 (Drosophila) Hs.515890 [show with all ESTs ] Unigene Representative Sequence: NM_001127401 GeneLoc Exon Structure 5/11 Alternative Splicing Database (ASD) splice patterns (SP) for YPEL5 (see all 11
) ExUns: 1a · 1b · 1c · 1d ^ 2a · 2b ^ 3a · 3b · 3c ^ 4a · 4b ^ 5a · 5b ^ 6a · 6b · 6c · 6d · 6e · 6f · 6g · 6h · 6i SP1 :         -   -         -     -                       SP2 :         -   -     -   -   -   -   -                       SP3 :         -   -   -   -   -   -     -                       SP4 :         -   -         -   -   -                       SP5 :         -   -       -   -   -   -                      
About this scheme ECgene alternative splicing isoforms for YPEL5 6 Ensembl transcripts including schematic representations : ENST00000261353
ENST00000402708
ENST00000379519
ENST00000402003
ENST00000408026
ENST00000379520
Expression for YPEL5
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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YPEL5 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for YPEL5 1 / 2 / 3
5 probe-sets matching YPEL5 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: TAACTTAAGCSOURCE GeneReport for Unigene cluster: Hs.515890
Orthologs for YPEL5
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for YPEL5 gene from 5/13 species (see all 13
)
About this table Species with no ortholog for YPEL5 ENSEMBL Gene Tree for YPEL5 Paralogs for YPEL5 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for YPEL5 gene YPEL1 2 YPEL3 2 YPEL2 2 YPEL4 2
SNPs/Variants for YPEL5 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for YPEL5 (up to first 250kb)
Disorders & Mutations for YPEL5
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 609726
Medical News for YPEL5 (Possibly Related Articles in
Doctor's Guide )
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Publications for YPEL5 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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6 PubMed articles for YPEL5 gene :
Search for YPEL5
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
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Genome Databases showing YPEL5
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing YPEL5
(According to HUGE )
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Specialized Databases showing YPEL5 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for YPEL5 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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