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Aliases for YPEL1 Gene

Aliases for YPEL1 Gene

  • Yippee Like 1 2 3 5
  • Yippee (Drosophila) Homolog-Like 1 2
  • DiGeorge Syndrome-Related Protein 3
  • Yippee-Like 1 (Drosophila) 2
  • Protein Yippee-Like 1 3
  • FKSG3 3

External Ids for YPEL1 Gene

Previous GeneCards Identifiers for YPEL1 Gene

  • GC22M018753
  • GC22M020379
  • GC22M020377
  • GC22M020381
  • GC22M022051
  • GC22M005009

Summaries for YPEL1 Gene

Entrez Gene Summary for YPEL1 Gene

  • This gene is located in the region associated with DiGeorge syndrome on chromosome 22. The encoded protein localizes to the centrosome and nucleolus and may play a role in the regulation of cell division. [provided by RefSeq, Feb 2015]

GeneCards Summary for YPEL1 Gene

YPEL1 (Yippee Like 1) is a Protein Coding gene. An important paralog of this gene is YPEL2.

UniProtKB/Swiss-Prot for YPEL1 Gene

  • May play a role in epithelioid conversion of fibroblasts.

No data available for Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for YPEL1 Gene

Genomics for YPEL1 Gene

Regulatory Elements for YPEL1 Gene

Enhancers for YPEL1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH22F021712 1.5 FANTOM5 Ensembl ENCODE 16.8 +22.0 21972 2.2 GATA2 ZNF143 ZNF263 REST ZNF623 SMARCA4 NBN SP7 BRD4 CTCF YPEL1 PPIL2 IGLV5-52 ENSG00000224086 PPM1F THAP7-AS1 THAP7 ENSG00000272779 TOP3B RN7SL280P
GH22F021813 1.7 FANTOM5 Ensembl ENCODE 11.4 -81.3 -81267 7.4 PKNOX1 ARNT CREB3L1 SIN3A CBX5 GATA2 ZNF207 FOS KLF13 KDM4B ENSG00000224086 PPM1F IGLV5-52 YPEL1 THAP7-AS1 THAP7 ENSG00000272779 TOP3BP1 MAPK1 HIC2
GH22F021772 1.1 Ensembl ENCODE 12.7 -38.2 -38213 3.6 HDAC1 TBL1XR1 PTRF RAD21 ZNF121 SCRT2 EGR2 CEBPB POLR2H TFDP1 ENSG00000224086 YPEL1 TOP3BP1 PPM1F TOP3B CCDC116 YDJC RNA5SP493
GH22F022109 1.2 Ensembl ENCODE 9.9 -375.4 -375382 3.7 HDGF WRNIP1 ZNF2 GATA2 ZNF143 FOS KDM4B ZNF263 JUNB TBX21 IGLV5-52 TOP3B YPEL1 ENSG00000272779 ABHD17AP5 IGLV8-61 LOC102724653 PIR46289
GH22F021823 1 Ensembl ENCODE 11.7 -88.4 -88368 2.4 ATF1 PYGO2 ZNF316 GATA3 PRDM10 NFE2 FOS ZNF600 KDM4B MAFK PPM1F ENSG00000224086 IGLV5-52 YPEL1 THAP7-AS1 THAP7 ENSG00000272779 TOP3B RNA5SP493 MAPK1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around YPEL1 on UCSC Golden Path with GeneCards custom track

Promoters for YPEL1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

Genomic Location for YPEL1 Gene

21,697,536 bp from pter
21,735,834 bp from pter
38,299 bases
Minus strand

Genomic View for YPEL1 Gene

Genes around YPEL1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YPEL1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YPEL1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YPEL1 Gene

Proteins for YPEL1 Gene

  • Protein details for YPEL1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Protein yippee-like 1
    Protein Accession:
    Secondary Accessions:
    • Q65ZA1
    • Q6GLI6

    Protein attributes for YPEL1 Gene

    119 amino acids
    Molecular mass:
    13575 Da
    Quaternary structure:
    No Data Available

neXtProt entry for YPEL1 Gene

Post-translational modifications for YPEL1 Gene

No Post-translational modifications

Other Protein References for YPEL1 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for YPEL1 Gene

Domains & Families for YPEL1 Gene

Gene Families for YPEL1 Gene

Protein Domains for YPEL1 Gene

Suggested Antigen Peptide Sequences for YPEL1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry



  • Contains 1 Yippee domain.
  • Belongs to the yippee family.
  • Contains 1 Yippee domain.
  • Belongs to the yippee family.
genes like me logo Genes that share domains with YPEL1: view

Function for YPEL1 Gene

Molecular function for YPEL1 Gene

UniProtKB/Swiss-Prot Function:
May play a role in epithelioid conversion of fibroblasts.

Gene Ontology (GO) - Molecular Function for YPEL1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0046872 metal ion binding IEA --
genes like me logo Genes that share ontologies with YPEL1: view
genes like me logo Genes that share phenotypes with YPEL1: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for YPEL1 Gene

Localization for YPEL1 Gene

Subcellular locations from UniProtKB/Swiss-Prot for YPEL1 Gene

Subcellular locations from

Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for YPEL1 gene
Compartment Confidence
nucleus 4
extracellular 3
mitochondrion 2
cytosol 1

Gene Ontology (GO) - Cellular Components for YPEL1 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with YPEL1: view

Pathways & Interactions for YPEL1 Gene

SuperPathways for YPEL1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for YPEL1 Gene


No data available for Pathways by source and SIGNOR curated interactions for YPEL1 Gene

Transcripts for YPEL1 Gene

mRNA/cDNA for YPEL1 Gene

Unigene Clusters for YPEL1 Gene

Yippee-like 1 (Drosophila):
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for YPEL1 Gene

ExUns: 1a · 1b · 1c ^ 2a · 2b ^ 3 ^ 4 ^ 5a · 5b ^ 6
SP1: - -
SP2: -
SP4: -

Relevant External Links for YPEL1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for YPEL1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for YPEL1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for YPEL1 Gene

This gene is overexpressed in Testis (x17.3).

NURSA nuclear receptor signaling pathways regulating expression of YPEL1 Gene:


SOURCE GeneReport for Unigene cluster for YPEL1 Gene:

genes like me logo Genes that share expression patterns with YPEL1: view

Primer Products

No data available for Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for YPEL1 Gene

Orthologs for YPEL1 Gene

This gene was present in the common ancestor of eukaryotes.

Orthologs for YPEL1 Gene

Organism Taxonomy Gene Similarity Type Details
(Pan troglodytes)
Mammalia YPEL1 34 35
  • 99.44 (n)
(Monodelphis domestica)
Mammalia YPEL1 35
  • 99 (a)
(Canis familiaris)
Mammalia YPEL1 34 35
  • 91.6 (n)
(Mus musculus)
Mammalia Ypel1 34 16 35
  • 90.4 (n)
(Bos Taurus)
Mammalia YPEL1 34 35
  • 89.92 (n)
(Rattus norvegicus)
Mammalia Ypel1 34
  • 89.55 (n)
(Ornithorhynchus anatinus)
Mammalia YPEL1 35
  • 77 (a)
(Gallus gallus)
Aves YPEL1 34
  • 84.59 (n)
(Anolis carolinensis)
Reptilia YPEL1 35
  • 100 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia ypel1 34
  • 82.63 (n)
Str.9858 34
African clawed frog
(Xenopus laevis)
Amphibia Xl.23559 34
(Danio rerio)
Actinopterygii ypel1 34 35
  • 84.03 (n)
ypel3 34
fruit fly
(Drosophila melanogaster)
Insecta CG15309 36 35
  • 87 (a)
(Caenorhabditis elegans)
Secernentea F37A8.5 36 35
  • 87 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes MOH1 35
  • 36 (a)
thale cress
(Arabidopsis thaliana)
eudicotyledons AT4G27745 34
  • 61.56 (n)
(Oryza sativa)
Liliopsida Os11g0551800 34
  • 62.24 (n)
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 79 (a)
Species where no ortholog for YPEL1 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for YPEL1 Gene

Gene Tree for YPEL1 (if available)
Gene Tree for YPEL1 (if available)

Paralogs for YPEL1 Gene

Paralogs for YPEL1 Gene

(4) SIMAP similar genes for YPEL1 Gene using alignment to 2 proteins: Pseudogenes for YPEL1 Gene

genes like me logo Genes that share paralogs with YPEL1: view

Variants for YPEL1 Gene

Sequence variations from dbSNP and Humsavar for YPEL1 Gene

SNP ID Clin Chr 22 pos Sequence Context AA Info Type
rs10009 -- 21,697,420(+) AGGCC(A/G)TCCTT downstream-variant-500B, utr-variant-3-prime
rs10427813 -- 21,726,446(+) ACCAC(A/G)GTCCC intron-variant
rs1045681 -- 21,698,525(-) GAGGT(C/T)CGTGC nc-transcript-variant, downstream-variant-500B, utr-variant-3-prime
rs10556255 -- 21,714,813(+) CAGCA(-/TC)TCATT intron-variant
rs10664985 -- 21,718,783(+) CACAC(-/AC)CATCT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for YPEL1 Gene

Variant ID Type Subtype PubMed ID
nsv955499 CNV deletion 24416366
nsv7350 OTHER inversion 18451855
nsv588322 CNV loss 21841781
nsv510804 CNV deletion 20534489
nsv191511 CNV deletion 16902084
nsv1060548 CNV gain 25217958
esv3557950 CNV deletion 23714750
esv2678585 CNV deletion 23128226
dgv1293e212 CNV loss 25503493

Variation tolerance for YPEL1 Gene

Residual Variation Intolerance Score: 45% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for YPEL1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for YPEL1 Gene

Disorders for YPEL1 Gene

Relevant External Links for YPEL1

Genetic Association Database (GAD)
Human Genome Epidemiology (HuGE) Navigator
Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for YPEL1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for YPEL1 Gene

Publications for YPEL1 Gene

  1. Identification and characterization of a novel gene family YPEL in a wide spectrum of eukaryotic species. (PMID: 15556292) Hosono K. … Shimizu N. (Gene 2004) 2 3 4 64
  2. Centrosome-related genes, genetic variation, and risk of breast cancer. (PMID: 20508983) Olson J.E. … Couch F.J. (Breast Cancer Res. Treat. 2011) 3 46 64
  3. Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PMID: 20379614) Rose J.E. … Uhl G.R. (Mol. Med. 2010) 3 46 64
  4. A genome annotation-driven approach to cloning the human ORFeome. (PMID: 15461802) Collins J.E. … Dunham I. (Genome Biol. 2004) 3 4 64
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64

Products for YPEL1 Gene

Sources for YPEL1 Gene

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