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Aliases & Descriptions for YES1
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| Aliases |
|---|
| EC 2.7.10.2 3 | | HsT441 1, 2 | | OTTHUMP00000162194 2 | | P61-YES 2 | | YES 3 | | Yes 1, 2 | | c-Yes 3 | | c-yes 1, 2 | | p61-Yes 3 |
| | | Descriptions |
|---|
| Yamaguchi sarcoma oncogene 2 | | cellular yes-1 protein 2 | | proto-oncogene tyrosine-protein kinase YES 2 | | v-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 2 | | viral oncogene yes-1 homolog 1 2 |
|
| | Search outside databases for aliases for YES1 genePrevious GC identifers: GC22P022739 GC18M000709 |
Summaries for YES1(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| EntrezGene summary for YES1: This gene is the cellular homolog of the Yamaguchi sarcoma virus oncogene. The encoded protein has tyrosine kinase activity and belongs to the src family of proteins. This gene lies in close proximity to thymidylate synthase gene on chromosome 18, and a corresponding pseudogene has been found on chromosome 22. [provided by RefSeq] UniProtKB/Swiss-Prot: YES_HUMAN, P07947Function: Promotes infectivity of Neisseria gonorrhoeae in epithelial cells by phosphorylating MCP/CD46Gene Wiki entry for YES1 |
Genomic Location for YES1
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Transcription factor binding sites upstream to the YES1 gene 
Entrez Gene cytogenetic band: 18p11.31-p11.21 Ensembl cytogenetic band: 18p11.32 HGNC cytogenetic band: 18p11.31-p11.21YES1 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 18 GeneLoc Exon Structure GeneLoc location for GC18M000711:
(about GC identifiers)
Start:
|
711,588 bp from pter |
End:
|
802,327 bp from pter |
Size:
|
90,740 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000018.8 NT_010859.14
| Proteins for YES1
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: YES_HUMAN, P07947 (See
protein sequence)Recommended Name: Proto-oncogene tyrosine-protein kinase Yes Size: 543 amino acids; 60801 Da
Subcellular location: Cytoplasm, cytosol. Note=In epithelial cells infected with Neisseria gonorrhoeae, forms aggregates beneath bacterial microcolonies
PDB structures from and Proteopedia :2HDA (3D)
 
Secondary accessions: A6NLB3Post-translational modifications:
Autophosphorylated1
View phosphorylation sites using PhosphoSite2
REFSEQ proteins: NP_005424.1
ENSEMBL proteins: ENSP00000352892 ENSP00000324740
Human Recombinant Proteins               OriGene Purified Recombinant Human Protein: YES1 
2 Gene Ontology (GO) cellular component terms (links to tree view): | GO ID | Qualified GO term | Evidence | PubMed IDs |
|---|
| GO:0005624 | membrane fraction |
IEA | -- | | GO:0005737 | cytoplasm |
IEA | -- | About this table
Antibodies for YES1: Assays for YES1: | Protein
Domains/ Families for YES1(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry P07947
ProtoNet protein and cluster: P07947 3 Blocks protein families: IPB000980 SH2 domain signature IPB001452 SH3 domain signature IPB008266 Tyrosine protein kinase
UniProtKB/Swiss-Prot: YES_HUMAN, P07947Similarity: Belongs to the protein kinase superfamily. Tyr protein kinase family. SRC subfamilySimilarity: Contains 1 protein kinase domainSimilarity: Contains 1 SH2 domainSimilarity: Contains 1 SH3 domain | Gene Function for YES1
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| Inhib. RNA: |  | Invitrogen RNAi Products for gene knock-down (YES1) | |  | Millipore RNAi Products for the Analysis of YES1 Gene knock-down | |  | Abnova Chimera RNAi Products for Gene knock-down (YES1) |               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005433
Applied Biosystems Silencer® siRNAs for YES1
Sigma-Aldrich siRNA and siRNA Panels for YES1  Sigma-Aldrich shRNA Panels and shRNA for YES1  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_005433                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_005433                                  untagged cDNA clones in CMV expression vector (see all 2): NM_005433 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_005433
UniProtKB/Swiss-Prot: YES_HUMAN, P07947Function: Promotes infectivity of Neisseria gonorrhoeae in epithelial cells by phosphorylating MCP/CD46Catalytic activity: ATP + a [protein]-L-tyrosine = ADP + a [protein]-L-tyrosine phosphateEnzyme Number (IUBMB): EC 2.7.10.2 Genatlas biochemistry entry for YES1:Yamaguchi sarcoma viral (v-yes-1) oncogene homolog 113 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Yes1):
5 Gene Ontology (GO) molecular function terms (links to tree view): About this table | Pathways & Interactions for YES1
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|
2 Sigma-Aldrich "Your Favorite Gene" Pathways for YES1 (Your Favorite Gene powered by Ingenuity) 
Gene Network CentralTM Interacting Genes and Proteins Network for YES1 
5/86 Interacting proteins for YES1 (P079471, 2 ENSP000003247403) via UniProtKB, MINT, and/or STRING (see all 86
)About this table
3 Gene Ontology (GO) biological process terms (links to tree view): About this table
|
Drugs & Compounds for YES1(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Compounds for YES1 available from Tocris Bioscience 3 Novoseek chemical compound relationships for YES1 gene
About this table
|
Transcripts for YES1(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
| Inhib. RNA: |  | Invitrogen RNAi Products for gene knock-down (YES1) | |  | Millipore RNAi Products for the Analysis of YES1 Gene knock-down | |  | Abnova Chimera RNAi Products for Gene knock-down (YES1) |               OriGene 29mer shRNA kit in GFP-retroviral vector: NM_005433
Sigma-Aldrich siRNA and siRNA Panels for YES1  Sigma-Aldrich shRNA Panels and shRNA for YES1  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_005433 REFSEQ mRNAs for YES1 gene: NM_005433.3
Applied Biosystems TaqMan ® Gene Expression Assays: NM_005433               OriGene GFP tagged cDNA clone in CMV expression vector: NM_005433                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_005433                                  untagged cDNA clones in CMV expression vector (see all 2): NM_005433  Additional cDNA sequence: AK314063.1 BC031080.1 BC048960.1 M15990.1 11 DOTS entries: DT.95156689 DT.416485 DT.95356709 DT.121087601 DT.100647936 DT.70105092 DT.121087580 DT.121087582 DT.91658947 DT.100785653 DT.100785654 24/174 AceView cDNA sequences (see all 174
):N53374 T28838 BP360000 BF438787 NM_005433 BU753250 AI124049 BG289848 AA345032 BM837753 AL047403 CB410797 CB145677 AA843100 AA126692 AA315217 BX503209 BP379820 AI628808 BM806670 AU140084 AW452094 BG119717 BF793664
highest scoring ESTs for YES1:M15990 BC031080 BC048960 BI560649 BI861691 BQ932574 BX473018 AA125883 AA126584 AA126692 Unigene Cluster for YES1: V-yes-1 Yamaguchi sarcoma viral oncogene homolog 1 Hs.194148 [show with all ESTs]Unigene Representative Sequence: NM_005433
GeneLoc Exon Structure
2 Ensembl transcripts including schematic representations: ENST00000359834
ENST00000314574
|
Expression for YES1
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| YES1 expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for YES1
1 / 2 / 3 7 probe-sets matching YES1 gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: AGATTTTTTA
SOURCE GeneReport for Unigene cluster: Hs.194148
Expression variation in blood from EXPOLDB for YES1 |
Orthologs for YES1
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for YES1 gene from 5/12 species (see all 12
)
About this table Species with no ortholog for YES1
ENSEMBL Gene Tree for YES1 | Paralogs for YES1(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| Paralogs for YES1 gene
- SRC2 FYN2 FGR2
|
SNPs/Variants for YES1(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for YES1 (up to first 250kb)
|
Disorders & Mutations for YES1
(in which this Gene is Involved, According to
OMIM, UniProtKB,
Novoseek, PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
|
OMIM: 164880
7 Novoseek disease relationships for YES1 gene
About this table
Human Genome Epidemiology Navigator: YES1 (1 document) Tumor Gene Database: YES1
|
Medical News for YES1(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for YES1 (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 10/105 PubMed articles for YES1 gene (see all 105
):- CD46 is phosphorylated at tyrosine 354 upon infection of epithelial cells by Neisseria gonorrhoeae. (PubMed id 11901164)1, 3, 4 Lee S.W....So M. (2002)
- Crystallographic structure of the SH3 domain of the human c-Yes tyrosine kinase: loop flexibility and amyloid aggregation. (PubMed id 17418139)3, 4 Martin-Garcia J.M....Camara-Artigas A. (2007)
- Proteomics analysis of protein kinases by target class-selective prefractionation and tandem mass spectrometry. (PubMed id 17192257)3, 4 Wissing J.... Daub H. (2007)
- Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)3, 4 Olsen J.V....Mann M. (2006)
- Immunoaffinity profiling of tyrosine phosphorylation in cancer cells. (PubMed id 15592455)3, 4 Rush J.... Comb M.J. (2005)
- Time-resolved mass spectrometry of tyrosine phosphorylation sites in the epidermal growth factor receptor signaling network reveals dynamic modules. (PubMed id 15951569)3, 4 Zhang Y.... White F.M. (2005)
- Quantitative phosphoproteome analysis using a dendrimer conjugation chemistry and tandem mass spectrometry. (PubMed id 16094384)3, 4 Tao W.A.... Aebersold R. (2005)
- The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334)3, 4 Gerhard D.S....Malek J. (2004)
- Characterization of cDNA clones for the human c-yes gene. (PubMed id 2436037)3, 4 Sukegawa J.... Toyoshima K. (1987)
- Location of the c-yes gene on the human chromosome and its expression in various tissues. (PubMed id 2983418)2, 3 Semba K....Toyoshima K. (1985)
|
Search for YES1
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing YES1
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing YES1
(According to HUGE)
About This Section
| -- |
Specialized Databases showing YES1(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for YES1(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for YES1:

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 | | | | |
|
 |  |  |
| Antibodies & Assays for YES1  (Yes) |
| | Recombinant Proteins (Yes1) | | Antibodies (Yes1) |
| | | Tocris compounds for YES1 |
|
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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