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Aliases & Descriptions for YDJC
(According to
1HGNC,
2Entrez Gene,
3UniProtKB/Swiss-Prot,
4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc
, and/or 7Ensembl,
8miRBase) About This Section
|
| | | Descriptions |
|---|
| YdjC homolog 2 | | YdjC homolog (bacterial) 2 |
|
| | Search outside databases for aliases for YDJC gene |
Summaries for YDJC(According to Entrez Gene,
Wikipedia's
Gene Wiki,
UniProtKB/Swiss-Prot,
and/or
UniProtKB/TrEMBL)
About This Section
| -- |
Genomic Location for YDJC
(According to
GeneLoc and/or
HGNC, and/or
Entrez Gene (NCBI build 36),
and/or miRBase,
Genomic Views according to
UCSC and
Ensembl,
Transcription factor binding sites according to
SABiosciences) About This Section
| Genomic View: UCSC Golden Path with GeneCards custom track
Entrez Gene cytogenetic band: 22q11.21 Ensembl cytogenetic band: 22q11.21 HGNC cytogenetic band: 22q11.21YDJC Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different)
 GeneLoc gene densities for chromosome 22 GeneLoc Exon Structure GeneLoc location for GC22M020312:
(about GC identifiers)
Start:
|
20,312,378 bp from pter |
End:
|
20,314,340 bp from pter |
Size:
|
1,963 bases |
Orientation:
|
minus strand |
RefSeq DNA sequence:- NC_000022.9 NT_011520.11
| Proteins for YDJC
(According to
1UniProtKB,
and/or Ensembl,
Phosphorylation sites according to 2Phosphosite,
RefSeq according to NCBI,
PDB rendering according to OCA and/or Proteopedia,
Recombinant Proteins
from Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Enzo Life Sciences,
Abnova,
OriGene and/or,
Abcam,
Biochemical Assays by
Invitrogen,
Millipore,
R&D Systems,
Cell Signaling Technology, and/or
Enzo Life Sciences,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene,
Antibodies by Invitrogen,
Millipore,
Sigma-Aldrich,
R&D Systems,
Cell Signaling Technology,
Abcam,
Abnova, and/or
Novus Biologicals)
About This Section
| UniProtKB/Swiss-Prot: YDJC_HUMAN, A8MPS7 (See
protein sequence)Recommended Name: UPF0249 protein ydjC homolog Size: 323 amino acids; 34466 Da
Secondary accessions: Q2YDT4 Q4V9R7Alternative splicing: 3 isoforms: A8MPS7-1 A8MPS7-2 A8MPS7-3 REFSEQ proteins: NP_001017964.1
ENSEMBL proteins: ENSP00000381847 ENSP00000292778
Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 
Antibodies for YDJC: Assays for YDJC: | Protein
Domains/ Families for YDJC(According to InterPro, ProtoNet,
UniProtKB, and/or BLOCKS,
Sets of similar genes according to GeneDecks)
About This Section
| - Graphical View of Domain Structure for InterPro Entry A8MPS7
ProtoNet protein and cluster: A8MPS7 UniProtKB/Swiss-Prot: YDJC_HUMAN, A8MPS7Similarity: Belongs to the UPF0249 family | Gene Function for YDJC
(According to MGI Jun 06 2009, UniProtKB,
IUBMB,and/or Genatlas,
shRNA from
OriGene,
Sigma-Aldrich, RNAi from
Sigma-Aldrich,
RNAi Products,
Clones, and
Q-PCR Products
from Invitrogen,
Millipore,
OriGene, and/or
Abnova,
siRNAs from
Applied Biosystems,
SYBR primers from OriGene,
Cell-based Assays from Millipore,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_001017965
Applied Biosystems Silencer® siRNAs for YDJC
Sigma-Aldrich siRNA for YDJC  Sigma-Aldrich shRNA for YDJC  Explore Sigma-Aldrich super-pooled esiRNAs 
              OriGene GFP tagged cDNA clone in CMV expression vector: NM_001017964                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001017964                                  untagged cDNA clone in CMV expression vector: NM_001017964 
Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_001017964
1 MGI phenotypic allele for Ydjc (no phenotypes)
| Pathways & Interactions for YDJC
(Pathways according to Invitrogen
(maps by GeneGo),
Millipore,
Cell Signaling Technology,
Sigma-Aldrich,
KEGG
and/or UniProtKB,
Sets of similar genes according to GeneDecks,
Proteins Network according to
SABiosciences,
Interactions according to 1UniProtKB,
2MINT, and/or
3STRING,
with links to IntAct and
Ensembl,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene.)
About This Section
| -- |
Drugs & Compounds for YDJC(Chemical Compounds according to UniProtKB, Enzo Life Sciences,
Sigma-Aldrich, Tocris Bioscience, and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB)
About This Section
|
Browse Tocris compounds for YDJC
|
Transcripts for YDJC(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank, RefSeq according to Entrez Gene,
DOTS (version 10), and/or
AceView,
non coding RNAs according to
RNAdb,
ESTs according to GeneTide,
exon structure from GeneLoc,
alternative splicing isoforms according to ASD and/or
ECgene,
RNAi Products from Invitrogen,
Millipore, and/or
Abnova,
siRNAs from Applied Biosystems,
Sigma-Aldrich,
shRNA from
Sigma-Aldrich,
OriGene,
Tagged/untagged cDNA clones from
OriGene, Expression Assays from Applied Biosystems) About This Section
|                OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 3): NM_001017965
Sigma-Aldrich siRNA for YDJC  Sigma-Aldrich shRNA for YDJC  Explore Sigma-Aldrich super-pooled esiRNAs 
Applied Biosystems Silencer® siRNAs: NM_001017964 REFSEQ mRNAs for YDJC gene: NM_001017964.1
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001017964               OriGene GFP tagged cDNA clone in CMV expression vector: NM_001017964                                  Myc/DDK tagged cDNA clone in CMV expression vector: NM_001017964                                  untagged cDNA clone in CMV expression vector: NM_001017964  Additional cDNA sequence: BC053663.1 BC057814.1 BC110075.1 BC110799.1 BC133043.1 BC133047.1 CR590781.1 CR594858.1 CR596616.1 CR597037.1 CR600451.1 CR611449.1 CR613078.1 CR613432.1 CR614195.1 CR618402.1 CR620409.1 CR624561.1 14 DOTS entries: DT.412232 DT.92462297 DT.101982274 DT.100821877 DT.97771308 DT.95133953 DT.100821876 DT.100821875 DT.75140188 DT.100692072 DT.100803936 DT.100833796 DT.95133954 DT.95133976 24/199 AceView cDNA sequences (see all 199
):CR611449 BX384302 CR597037 CR613078 CR600451 BM920756 BM851387 CR596616 CR624561 CR620409 AI221458 AI471630 BM273290 AI656234 BM052966 AI083906 BU631753 BM273054 BI907254 CR613432 BM761651 BX326782 BU857339 BE791432 Unigene Cluster for YDJC: YdjC homolog (bacterial) Hs.355952 [show with all ESTs]Unigene Representative Sequence: BM906422
GeneLoc Exon Structure
5/11 Alternative Splicing Database (ASD) splice patterns (SP) for YDJC (see all 11
)
| ExUns: | 1a | · | 1b | · | 1c | · | 1d | · | 1e | ^ | 2a | · | 2b | ^ | 3 | ^ | 4a | · | 4b | · | 4c | · | 4d | ^ | 5a | · | 5b | · | 5c | · | 5d | · | 5e | · | 5f | |
| SP1: | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP2: | |   | |   | |   | |   | |   | |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP3: | |   | |   | |   | |   | |   | |   | - |   | |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |
| SP4: | |   | |   | |   | |   | |   | - |   | - |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |   | |
| SP5: | |   | |   | |   | |   | |   | |   | |   | |   | - |   | - |   | - |   | - |   | |   | |   | |   | |   | |   | |   |
About this scheme
ECgene alternative splicing isoforms for YDJC
2 Ensembl transcripts including schematic representations: ENST00000398873
ENST00000292778
|
Expression for YDJC
(Experimental results according to
1GeneNote
and GNF BioGPS,
probe sets-to-genes annotations according to
2GeneAnnot ,
3GeneTide ,
Sets of similar genes according to GeneDecks,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP,
plus additional links to
SOURCE, and/or
GNF
BioGPS, and/or
EXPOLDB, and/or
UniProtKB,
Expression Assays from
Applied Biosystems
)
About This Section
| YDJC expression in normal and diseased human tissues
Applied Biosystems TaqMan ® Gene Expression Assays for YDJC
1 / 2 4 probe-sets matching YDJC gene Data from
(Publications) and GNF BioGPS About these images About these images
CGAP SAGE TAG: TTGCAATGCA
SOURCE GeneReport for Unigene cluster: Hs.355952
|
Orthologs for YDJC
(Orthologs according to
1,2HomoloGene (2older version, for species not in 1newer version),
3euGenes,
4SGD
and/or
5MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase,
Gene Trees according to Ensembl)
About This Section
|
Orthologs for YDJC gene from 5/6 species (see all 6
)
About this table Species with no ortholog for YDJC
ENSEMBL Gene Tree for YDJC | Paralogs for YDJC(Paralogs according to 1HomoloGene and 2Ensembl, Pseudogenes according to 3Pseudogene.org) About This Section
| -- |
SNPs/Variants for YDJC(According to the
1NCBI SNP Database,
2Ensembl,
3PupaSUITE, and
UniProtKB,
Linkage Disequilibrium by HapMap,
Genotyping Reagents from
Applied Biosystems)
About This Section
|
HapMap Linkage Disequilibrium images for YDJC (up to first 250kb)
|
Disorders & Mutations for YDJC
(in which this Gene is Involved, According to
OMIM, UniProtKB,
PharmGKB,
Genatlas, GeneTests,
Blood group antigen gene mutations by BGMUT,
HGMD, GAD,
HuGE Navigator,
BCGD,
and/or TGDB.)
About This Section
| -- |
Medical News for YDJC(Possibly Related Articles in
Doctor's Guide)
About This Section
| -- |
Publications for YDJC (in
PubMed.
Associations of this gene to articles via
1Novoseek,
2HGNC,
3Entrez Gene,
4UniProtKB/Swiss-Prot,
5UniProtKB/TrEMBL,
6GAD, and/or
7PharmGKB)
About This Section
| 4 PubMed articles for YDJC gene: |
Search for YDJC
(in PubMed,
OMIM, and NCBI Bookshelf) About This Section
|
|
Genome Databases showing YDJC
(According to
Entrez Gene,
HGNC,
AceView,
euGenes,
Ensembl,
miRBase,
ECgene,
and/or
H-InvDB)
About This Section
|
| Other Databases showing YDJC
(According to HUGE)
About This Section
| -- |
Specialized Databases showing YDJC(According to ATLAS, HORDE, IMGT, MTDB, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL, Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot) About This Section
|
| About This Section
| --
| Services for YDJC(Reagents available from Applied Biosystems, Antibodies and assays by Cell
Signaling Technology, Abcam, Novus Biologicals, Sigma-Aldrich, R&D Systems, Millipore, Abnova, and/or Invitrogen, Clones available from OriGene,and/or Invitrogen, Drugs and/or compounds by Sigma-Aldrich, Enzo Life Sciences, and/or Tocris Bioscience) About This Section
| 
 Products for YDJC:

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| | | | Search Tocris compounds for YDJC |
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GeneCards Homepage - Last full update: 2 Jul 2009
Incremental update: 13 Oct 2009
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