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Aliases for YBX1P6 Gene

Aliases for YBX1P6 Gene

  • Y-Box Binding Protein 1 Pseudogene 6 2 3 5

External Ids for YBX1P6 Gene

Previous GeneCards Identifiers for YBX1P6 Gene

  • GC09M112297

Summaries for YBX1P6 Gene

GeneCards Summary for YBX1P6 Gene

YBX1P6 (Y-Box Binding Protein 1 Pseudogene 6) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for YBX1P6 Gene

Genomics for YBX1P6 Gene

Regulatory Elements for YBX1P6 Gene

Enhancers for YBX1P6 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH09F109536 0.7 ENCODE 27.3 -3.2 -3211 2.0 NFIA CUX1 ZBTB33 RAD21 HOMEZ YY1 YBX1P6 PTPN3
GH09F109521 0.6 ENCODE 11.7 +12.3 12276 1.5 ZNF280D CBX3 HLF CHAMP1 CBX1 ZNF610 CBX5 ZNF585B TRIM24 TRIM28 YBX1P6 PTPN3 PALM2 EPB41L4B MIR3927
GH09F109488 0.2 ENCODE 11.2 +45.5 45510 1.6 KLF1 ZFHX2 CTBP1 EGR2 YBX1P6 EPB41L4B PTPN3 GC09P109498 ENSG00000207329
GH09F109554 0.5 ENCODE 11 -22.0 -22017 3.5 BCOR PKNOX1 ZMYM3 SIN3A GATA3 CTBP1 ADNP ETV6 TCF7L2 SMARCA5 YBX1P6 PALM2 PALM2-AKAP2 AKAP2 PTPN3
GH09F109494 1.2 FANTOM5 Ensembl ENCODE 10.6 +36.9 36876 5.6 PKNOX1 ARID4B SIN3A DMAP1 ZNF48 GLIS2 GATA2 ELK1 SP3 SP5 YBX1P6 PTPN3 GC09P109498 ENSG00000207329
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around YBX1P6 on UCSC Golden Path with GeneCards custom track

Genomic Location for YBX1P6 Gene

Chromosome:
9
Start:
109,532,414 bp from pter
End:
109,534,471 bp from pter
Size:
2,058 bases
Orientation:
Minus strand

Genomic View for YBX1P6 Gene

Genes around YBX1P6 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YBX1P6 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YBX1P6 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YBX1P6 Gene

Proteins for YBX1P6 Gene

Post-translational modifications for YBX1P6 Gene

No Post-translational modifications

No data available for DME Specific Peptides for YBX1P6 Gene

Domains & Families for YBX1P6 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for YBX1P6 Gene

Function for YBX1P6 Gene

Phenotypes for YBX1P6 Gene

GenomeRNAi human phenotypes for YBX1P6:
genes like me logo Genes that share phenotypes with YBX1P6: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for YBX1P6 Gene

Localization for YBX1P6 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for YBX1P6 Gene

Pathways & Interactions for YBX1P6 Gene

SuperPathways for YBX1P6 Gene

No Data Available

Interacting Proteins for YBX1P6 Gene

Gene Ontology (GO) - Biological Process for YBX1P6 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for YBX1P6 Gene

Transcripts for YBX1P6 Gene

mRNA/cDNA for YBX1P6 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for YBX1P6 Gene

No ASD Table

Relevant External Links for YBX1P6 Gene

GeneLoc Exon Structure for
YBX1P6
ECgene alternative splicing isoforms for
YBX1P6

Expression for YBX1P6 Gene

mRNA expression in normal human tissues for YBX1P6 Gene

mRNA differential expression in normal tissues according to GTEx for YBX1P6 Gene

This gene is overexpressed in Skin - Sun Exposed (Lower leg) (x18.1), Skin - Not Sun Exposed (Suprapubic) (x11.5), Esophagus - Mucosa (x5.6), and Vagina (x4.6).

NURSA nuclear receptor signaling pathways regulating expression of YBX1P6 Gene:

YBX1P6
genes like me logo Genes that share expression patterns with YBX1P6: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for YBX1P6 Gene

Orthologs for YBX1P6 Gene

Evolution for YBX1P6 Gene

ENSEMBL:
Gene Tree for YBX1P6 (if available)
TreeFam:
Gene Tree for YBX1P6 (if available)

No data available for Orthologs for YBX1P6 Gene

Paralogs for YBX1P6 Gene

No data available for Paralogs for YBX1P6 Gene

Variants for YBX1P6 Gene

Relevant External Links for YBX1P6 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
YBX1P6

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for YBX1P6 Gene

Disorders for YBX1P6 Gene

No disorders were found for YBX1P6 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for YBX1P6 Gene

Publications for YBX1P6 Gene

No publications were found for YBX1P6 Gene.

Products for YBX1P6 Gene

Sources for YBX1P6 Gene

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