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Aliases for YBX1P1 Gene

Aliases for YBX1P1 Gene

  • Y-Box Binding Protein 1 Pseudogene 1 2 3 5
  • Nuclease Sensitive Element Binding Protein 1 Pseudogene 2 3
  • PSDBPB1 3
  • NSEP1P 3

External Ids for YBX1P1 Gene

Previous HGNC Symbols for YBX1P1 Gene

  • NSEP1P

Previous GeneCards Identifiers for YBX1P1 Gene

  • GC14M065550
  • GC14M066480

Summaries for YBX1P1 Gene

GeneCards Summary for YBX1P1 Gene

YBX1P1 (Y-Box Binding Protein 1 Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for YBX1P1 Gene

Genomics for YBX1P1 Gene

Regulatory Elements for YBX1P1 Gene

Enhancers for YBX1P1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH14F065410 0.5 ENCODE 12.9 +601.0 601003 4.0 PKNOX1 MLX ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 FOS LOC102723809 YBX1P1 LOC100506321 MIR625 RPL21P8 FUT8 FUT8-AS1 GC14M065468
GH14F065222 1 Ensembl ENCODE 12.9 +791.3 791285 1.1 CTCF CREB3L1 TEAD4 EBF1 ZNF644 RAD21 TEAD3 GATA3 HSF1 ZNF143 LOC102723809 YBX1P1 LOC100506321 LOC100128233 LOC100420096
GH14F066046 0.8 Ensembl ENCODE 11.6 -31.8 -31771 0.8 MTA2 TAL1 TRIM22 TBX21 ZBTB40 ARID1B RAD51 NCOR1 SCRT2 IKZF1 YBX1P1 PIR40106 LOC105370540
GH14F066044 0.3 FANTOM5 11.6 -30.6 -30618 0.0 TBX21 YBX1P1 GPHN PIR40106 LOC105370540
GH14F066045 0.3 FANTOM5 11.6 -30.2 -30195 0.2 ZNF146 YBX1P1 PIR40106 LOC105370540
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around YBX1P1 on UCSC Golden Path with GeneCards custom track

Promoters for YBX1P1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001790180 132 400

Genomic Location for YBX1P1 Gene

Chromosome:
14
Start:
66,012,433 bp from pter
End:
66,013,933 bp from pter
Size:
1,501 bases
Orientation:
Minus strand

Genomic View for YBX1P1 Gene

Genes around YBX1P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
YBX1P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for YBX1P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YBX1P1 Gene

Proteins for YBX1P1 Gene

Post-translational modifications for YBX1P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for YBX1P1 Gene

Domains & Families for YBX1P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for YBX1P1 Gene

Function for YBX1P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for YBX1P1 Gene

Localization for YBX1P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for YBX1P1 Gene

Pathways & Interactions for YBX1P1 Gene

SuperPathways for YBX1P1 Gene

No Data Available

Interacting Proteins for YBX1P1 Gene

Gene Ontology (GO) - Biological Process for YBX1P1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for YBX1P1 Gene

Transcripts for YBX1P1 Gene

mRNA/cDNA for YBX1P1 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for YBX1P1 Gene

No ASD Table

Relevant External Links for YBX1P1 Gene

GeneLoc Exon Structure for
YBX1P1
ECgene alternative splicing isoforms for
YBX1P1

Expression for YBX1P1 Gene

mRNA expression in normal human tissues for YBX1P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of YBX1P1 Gene:

YBX1P1
genes like me logo Genes that share expression patterns with YBX1P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for YBX1P1 Gene

Orthologs for YBX1P1 Gene

Evolution for YBX1P1 Gene

ENSEMBL:
Gene Tree for YBX1P1 (if available)
TreeFam:
Gene Tree for YBX1P1 (if available)

No data available for Orthologs for YBX1P1 Gene

Paralogs for YBX1P1 Gene

No data available for Paralogs for YBX1P1 Gene

Variants for YBX1P1 Gene

Relevant External Links for YBX1P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
YBX1P1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for YBX1P1 Gene

Disorders for YBX1P1 Gene

Relevant External Links for YBX1P1

Genetic Association Database (GAD)
YBX1P1

No disorders were found for YBX1P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for YBX1P1 Gene

Publications for YBX1P1 Gene

  1. Two human genes isolated by a novel method encode DNA-binding proteins containing a common region of homology. (PMID: 2977358) Sakura H. … Ishii S. (Gene 1988) 2 3 64
  2. Characterization of the gene for dbpA, a family member of the nucleic-acid-binding proteins containing a cold-shock domain. (PMID: 7628487) Kudo S. … Fukuda M. (Eur. J. Biochem. 1995) 3 64

Products for YBX1P1 Gene

Sources for YBX1P1 Gene

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