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Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

YAP1 Gene

protein-coding   GIFtS: 65
GCID: GC11P102015

Yes-associated protein 1

(Previous names: Yes-associated protein 1, 65kDa )
 Explore 24 diseases affiliated with
YAP1 via our new
 Human Malady Compendium 
Biological research products
for YAP1
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Yes-Associated Protein 11 2     YKI2
YAP651 2 3     Yes-Associated Protein 22
65 KDa Yes-Associated Protein2 3     Yes-Associated Protein Beta2
Yes-Associated Protein 1, 65kDa1     Yes-Associated Protein Delta2
YAP2     Yorkie Homolog2
YAP22     

External Ids:    HGNC: 162621   Entrez Gene: 104132   Ensembl: ENSG000001376937   OMIM: 6066085   UniProtKB: P469373   

Export aliases for YAP1 gene to outside databases

Previous GC identifers: GC11P104175 GC11P103338 GC11P101519 GC11P101486 GC11P097907


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for YAP1:
This gene encodes the human ortholog of chicken YAP protein which binds to the SH3 domain of the Yes proto-oncogene
product. This protein contains a WW domain that is found in various structural, regulatory and signaling molecules in
yeast, nematode, and mammals, and may be involved in protein-protein interaction. (provided by RefSeq, Jul 2008)

UniProtKB/Swiss-Prot: YAP1_HUMAN, P46937
Function: Transcriptional regulator which can act both as a coactivator and a corepressor and is the critical
downstream regulatory target in the Hippo signaling pathway that plays a pivotal role in organ size control and tumor
suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase
cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates
LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and
WWTR1/TAZ. Plays a key role to control cell proliferation in response to cell contact. Phosphorylation of YAP1 by
LATS1/2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell
death, and cell migration. The presence of TEAD transcription factors are required for it to stimulate gene
expression, cell growth, anchorage-independent growth, and epithelial mesenchymal transition (EMT) induction. Isoform
2 and isoform 3 can activate the C-terminal fragment (CTF) of ERBB4 (isoform 3)

Gene Wiki entry for YAP1


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000011.9  NC_018922.1  NT_033899.8  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the YAP1 gene promoter:
         TBP   p53   AP-1   p300   ATF-2   JunD   TFIID   c-Jun   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidYAP1 promoter sequence
   Search SABiosciences Chromatin IP Primers for YAP1

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat YAP1


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 11q13   Ensembl cytogenetic band:  11q22.1   HGNC cytogenetic band: 11q13

YAP1 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
YAP1 gene location

GeneLoc information about chromosome 11         GeneLoc Exon Structure

GeneLoc location for GC11P102015:  view genomic region     (about GC identifiers)

Start:
101,981,192 bp from pter      End:
102,104,154 bp from pter
Size:
122,963 bases      Orientation:
plus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: YAP1_HUMAN, P46937 (See protein sequence)
Recommended Name: Yorkie homolog  
Size: 504 amino acids; 54462 Da
Subunit: Binds to the SH3 domain of the YES kinase. Binds to WBP1 and WBP2. Binds, in vitro, through the WW1 domain, to
neural isoforms of ENAH that contain the PPSY motif (By similarity). The phosphorylated form interacts with YWHAB.
Interacts (via WW domains) with LATS1 (via PPxY motif 2). Interacts with LATS2. Isoform 2 and isoform 3 interact (via
WW domain 1) with isoform 3 of ERBB4 (via PPxY motif 2). Interacts with TEAD1, TEAD2, TEAD3 and TEAD4. Interacts with
TP73. Interacts with RUNX1. Interacts with HCK. Interacts (via WW domains) with PTPN14 (via PPxY motif 2); this
interaction leads to the cytoplasmic sequestration of YAP1 and inhibits its transcriptional coactivator activity
Subcellular location: Cytoplasm. Nucleus. Note=Both phosphorylation and cell density can regulate its subcellular
localization. Phosphorylation sequesters it in the cytoplasm by inhibiting its translocation into the nucleus. At low
density, predominantly nuclear and is translocated to the cytoplasm at high density. PTPN14 induces translocation from
the nucleus to the cytoplasm
6/11 PDB 3D structures from and Proteopedia for YAP1 (see all 11):
1JMQ (3D)        1K5R (3D)        1K9Q (3D)        1K9R (3D)        2LAW (3D)        2LAX (3D)    
Secondary accessions: B4DTY1 Q7Z574 Q8IUY9
Alternative splicing: 4 isoforms:  P46937-1   P46937-2   P46937-3   P46937-4   (No experimental confirmation available)

Explore the universe of human proteins at neXtProt for YAP1: NX_P46937

Post-translational modifications:

  • Phosphorylated by LATS1 and LATS2; leading to cytoplasmic translocation and inactivation. Phosphorylated by ABL1;
  • leading to YAP1 stabilization, enhanced interaction with TP73 and recruitment onto proapoptotic genes; in response to
    DNA damage. Phosphorylation at Ser-400 and Ser-403 by CK1 is triggered by previous phosphorylation at Ser-397 by LATS
    proteins and leads to YAP1 ubiquitination by SCF(beta-TRCP) E3 ubiquitin ligase and subsequent degradation.
    Phosphorylated at Thr-119, Ser-138, Thr-154, Ser-367 and Thr-412 by MAPK8/JNK1 and MAPK9/JNK2, which is required for
    the regukation of apoptosis by YAP11
  • Ubiquitinated by SCF(beta-TRCP) E3 ubiquitin ligase1
  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_P46937

  • YAP1 Protein expression data from MOPED and PaxDb:    About this image 
    YAP1 Protein Expression
    REFSEQ proteins (4 alternative transcripts): 
    NP_001123617.1  NP_001181973.1  NP_001181974.1  NP_006097.2  

    ENSEMBL proteins: 
     ENSP00000434134   ENSP00000282441   ENSP00000431574   ENSP00000435602   ENSP00000431626  
     ENSP00000445635   ENSP00000331023  
    Reactome Protein details: P46937
    Human Recombinant Protein Products for YAP1: 
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    Novus Biologicals YAP1 Proteins
    Novus Biologicals YAP1 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for YAP1

    Gene Ontology (GO): 5 cellular component terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA18280240
    GO:0005654nucleoplasm TAS--
    GO:0005667transcription factor complex IEA--
    GO:0005737cytoplasm IDA18158288
    GO:0005829cytosol TAS--

    YAP1 for ontologies           About GeneDecksing



    YAP1 Antibody Products: 
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    Uscn ELISAs and CLIAs for YAP1


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    YAP1 for domains           About GeneDecksing

    1 InterPro domain/family:
     IPR001202 WW_Rsp5_WWP

    Graphical View of Domain Structure for InterPro Entry P46937

    ProtoNet protein and cluster: P46937

    1 Blocks protein family: IPB002349 WW domain signature

    UniProtKB/Swiss-Prot: YAP1_HUMAN, P46937
    Similarity: Belongs to the YORKIE family
    Similarity: Contains 2 WW domains


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013, inGenious Targeting Laboratory,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase, shRNA from OriGene, Sirion Biotech, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Sirion Biotech, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, Sirion Biotech, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Molecular Function:

         UniProtKB/Swiss-Prot Summary: YAP1_HUMAN, P46937
    Function: Transcriptional regulator which can act both as a coactivator and a corepressor and is the critical
    downstream regulatory target in the Hippo signaling pathway that plays a pivotal role in organ size control and tumor
    suppression by restricting proliferation and promoting apoptosis. The core of this pathway is composed of a kinase
    cascade wherein STK3/MST2 and STK4/MST1, in complex with its regulatory protein SAV1, phosphorylates and activates
    LATS1/2 in complex with its regulatory protein MOB1, which in turn phosphorylates and inactivates YAP1 oncoprotein and
    WWTR1/TAZ. Plays a key role to control cell proliferation in response to cell contact. Phosphorylation of YAP1 by
    LATS1/2 inhibits its translocation into the nucleus to regulate cellular genes important for cell proliferation, cell
    death, and cell migration. The presence of TEAD transcription factors are required for it to stimulate gene
    expression, cell growth, anchorage-independent growth, and epithelial mesenchymal transition (EMT) induction. Isoform
    2 and isoform 3 can activate the C-terminal fragment (CTF) of ERBB4 (isoform 3)

         Gene Ontology (GO): 5/7 molecular function terms (GO ID links to tree view) (see all 7):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001076RNA polymerase II transcription factor binding transcription factor activity IEA--
    GO:0003682chromatin binding IEA--
    GO:0003713transcription coactivator activity IDA18280240
    GO:0003714transcription corepressor activity IDA18158288
    GO:0005515protein binding IPI9305852
         
    YAP1 for ontologies           About GeneDecksing


    Phenotypes:
         4 GenomeRNAi human phenotypes for YAP1:
     Decreased NANOG protein expres  Decreased OCT4 protein express  Decreased POU5F1-GFP protein e  Decreased viability of wild-ty 

         13 MGI mutant phenotypes (inferred from 6 alleles(MGI details for Yap1):
     cardiovascular system  cellular  digestive/alimentary  embryogenesis  endocrine/exocrine gland 
     growth/size  homeostasis/metabolism  immune system  integument  liver/biliary system 
     mortality/aging  nervous system  tumorigenesis 

    YAP1 for phenotypes           About GeneDecksing

    Animal Models:
         Mouse knock-outs for YAP1: Yap1tm1Smil Yap1tm1.2Dupa
       inGenious Targeting Laboratory - Customizable classic, inducible, and humanized mouse model solutions for YAP1 

    miRNA
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    miRTarBase miRNAs that target YAP1:
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    Gene Editing
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    Clone
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    In Situ Assay
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    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for YAP1


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways - 5/15 super-pathways (see all 15About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Generic Transcription Pathway
    Generic Transcription Pathway1.00
    Gene Expression0.46
    2Tyrosine Kinases / Adaptors
    Tyrosine Kinases / Adaptors1.00
    3PI3K / Akt Signaling
    PI3K / Akt Signaling1.00
    4CFTR-dependent regulation of ion channels in Airway Epithelium (norm and CF)
    CFTR-dependent regulation of ion channels in Airway Epithelium (norm and CF)1.00
    5YAP1- and WWTR1 (TAZ)-stimulated gene expression
    YAP1- and WWTR1 (TAZ)-stimulated gene expression1.00

    Pathway sources
    See GeneCards unified pathways
    Show all pathways

    3 Downloadable PowerPoint Slides of QIAGEN Pathway Central Maps for YAP1
        14-3-3 and Regulation of BAD Activity
    14-3-3 Induced Intracellular Signaling
    Akt Signaling

    2 Cell Signaling Technology (CST) Pathways for YAP1
        Tyrosine Kinases / Adaptors
    PI3K / Akt Signaling

    1 GeneGo (Thomson Reuters) Pathway for YAP1
        CFTR-dependent regulation of ion channels in Airway Epithelium (norm and CF)

    3 BioSystems Pathways for YAP1 
        TGF-beta Receptor Signaling Pathway
    TGF-beta receptor signaling
    ErbB4 signaling events

    5/7        Reactome Pathways for YAP1 (see all 7)
        Signaling by Hippo
    Generic Transcription Pathway
    Signal Transduction
    Gene Expression
    Signaling by ERBB4



    YAP1 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for YAP1

    STRING Interaction Network Preview (showing 5 interactants - click image to see 25)

    5/86 Interacting proteins for YAP1 (P469371, 2, 3 ENSP000002824414) via UniProtKB, MINT, STRING, and/or I2D (see all 86)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    TP73O153502, 3, ENSP000003675454MINT-3388748 MINT-3388922 MINT-3388949 MINT-3388697 MINT-3388978 MINT-3388723 MINT-3388775 I2D: score=4 STRING: ENSP00000367545
    YWHABP319462, 3, ENSP000003001614MINT-8008033 MINT-8009689 I2D: score=1 STRING: ENSP00000300161
    BTRCQ9Y2972, 3, ENSP000003592064MINT-8249751 I2D: score=2 STRING: ENSP00000359206
    TP63Q9H3D42, 3, ENSP000002647314MINT-3388996 I2D: score=2 STRING: ENSP00000264731
    MED28Q9H2042, 3, ENSP000002373804MINT-7041969 I2D: score=1 STRING: ENSP00000237380
    About this table

    Gene Ontology (GO): 5/26 biological process terms (GO ID links to tree view) (see all 26):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0001570vasculogenesis IEA--
    GO:0003143embryonic heart tube morphogenesis IEA--
    GO:0006355regulation of transcription, DNA-dependent ----
    GO:0006357regulation of transcription from RNA polymerase II promoter ----
    GO:0006366transcription from RNA polymerase II promoter ----

    YAP1 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    YAP1 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for YAP1
    3 Novoseek chemical compound relationships for YAP1 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tyrosine 15.6 5 14765127 (2), 11278685 (1), 16061658 (1)
    proline 12.5 2 8035999 (2)
    serine 3.3 2 8035999 (1), 19141641 (1)

    Search CenterWatch for drugs/clinical trials and news about YAP1 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, Sirion Biotech, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for YAP1 gene (4 alternative transcripts): 
    NM_001130145.2  NM_001195044.1  NM_001195045.1  NM_006106.4  

    Unigene Cluster for YAP1:

    Yes-associated protein 1
    Hs.503692  [show with all ESTs]
    Unigene Representative Sequence: NM_001130145
    9 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000526343 ENST00000282441(uc001pgt.3 uc001pgu.3 uc001pgv.3 uc021qpf.1 uc010ruo.2 uc001pgw.2 uc010rup.1)
    ENST00000531439 ENST00000524575 ENST00000526594 ENST00000529029 ENST00000528834
    ENST00000537274 ENST00000345877

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    8/27 QIAGEN miScript miRNA Assays for microRNAs that regulate YAP1 (see all 27):
    hsa-miR-411* hsa-miR-3130-5p hsa-miR-379* hsa-miR-199b-3p hsa-miR-199a-3p hsa-miR-3942-5p hsa-miR-15a hsa-miR-200a
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    Additional cDNA sequence: 

    AB567720.1 AB567721.1 AK300414.1 AK304485.1 AK310620.1 AK316116.1 AL832620.2 AY316529.1 
    BC026212.2 BC038235.1 HE864159.1 HE864160.1 HE864161.1 HE864162.1 HE864163.1 

    16 DOTS entries:

    DT.100824242  DT.446373  DT.91673001  DT.100043384  DT.91745842  DT.101979534  DT.120701800  DT.100824244 
    DT.307255  DT.120701732  DT.120701734  DT.120701753  DT.212517  DT.92436111  DT.95243946  DT.100710900 

    24/292 AceView cDNA sequences (see all 292):

    BI261054 CA426862 AI831200 AI598122 AI128142 CK904064 BI223791 BU073244 
    BX089620 BC026212 BI966208 BQ008172 AA917078 AI590105 AW081855 AA887603 
    BM825245 BQ880612 AA182461 NM_006106 AI963820 BU622656 AI005171 AA610311 

    GeneLoc Exon Structure

    5/7 Alternative Splicing Database (ASD) splice patterns (SP) for YAP1 (see all 7)    About this scheme

    ExUns: 1a · 1b ^ 2 ^ 3a · 3b ^ 4 ^ 5 ^ 6a · 6b ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12a · 12b · 12c · 12d · 12e · 12f
    SP1:              -                                               -           -                                             
    SP2:              -                                         -     -           -                                             
    SP3:                                                              -           -                                             
    SP4:                                      -                 -     -           -                                             
    SP5:                                                                                                                        


    ECgene alternative splicing isoforms for YAP1

    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    YAP1 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: CTCATATGTT
    YAP1 Expression
    About this image

    YAP1 expression in embryonic tissues and stem cells
    Expression by the Database of Embryonic development, Stem cell research, and Regenerative medicine    About this table

    2 LifeMap In Vivo Development Anatomical Compartments/Cells 
    Tissue Anatomical Compartment CellCategory (developmental path)
    Early Embryo (Zygote)MorulaMorula CellsEarly Embryo
    TrophoblastTrophoblastTrophoblast CellsExtraembryonic Tissues
    Expression: Positive    Negative     Selective marker
    Experimental details: Curated     Microarrays     In-situ hybridization

    See YAP1 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for YAP1

    SOURCE GeneReport for Unigene cluster: Hs.503692

    UniProtKB/Swiss-Prot: YAP1_HUMAN, P46937
    Tissue specificity: Increased expression seen in some liver and prostate cancers. Isoforms lacking the transactivation
    domain found in striatal neurons of patients with Huntington disease (at protein level)

        SABiosciences Expression via Pathway-Focused PCR Array including YAP1: 
              Liver Cancer in human mouse rat

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    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of animals.

    Orthologs for YAP1 gene from 5/18 species (see all 18)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    chicken
    (Gallus gallus)
    Aves YAP11 Yes-associated protein 1 82.22(n)
    89.06(a)
      396171  NM_205243.1  NP_990574.1 
    lizard
    (Anolis carolinensis)
    Reptilia YAP16
    --
    92(a)
    1 ↔ 1
    3(192366679-192416810)
    African clawed frog
    (Xenopus laevis)
    Amphibia Xl.76562 Xenopus laevis transcribed sequence with moderate similarity more 79.48(n)    BJ619727.1 
    zebrafish
    (Danio rerio)
    Actinopterygii Dr.126982 Transcribed sequence with moderate similarity to protein more 76.72(n)    CD750884.1 
    fruit fly
    (Drosophila melanogaster)
    Insecta yki6
    yorkie
    26(a)
    1 → many
    2R(19953498-19956008)


    ENSEMBL Gene Tree for YAP1 (if available)
    TreeFam Gene Tree for YAP1 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
    Paralogs for YAP1 gene
    WWTR12  
    4 SIMAP similar genes for YAP1 using alignment to 9 protein entries:     YAP1_HUMAN (see all proteins):
    YAP    DKFZp451O0517    WWC2    WWTR1

    YAP1 for paralogs           About GeneDecksing


    3 Pseudogenes.org Pseudogenes for YAP1
    PGOHUM00000243353 PGOHUM00000243810 PGOHUM00000241958


    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/2161 NCBI SNPs in YAP1 are shown (see all 2161    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 11 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs735778181,2
    C--97905889(+) GTTTTT/AAATGC 3 -- us2k12Minor allele frequency- A:0.06WA 120
    rs122801911,2
    --97905989(+) AGAAAG/TAGAGG 3 -- us2k1 trp30--------
    rs1129346131,2
    F--97906194(+) GGAAAT/CAAATA 3 -- us2k14Minor allele frequency- C:0.15CSA WA 123
    rs112251311,2
    --97906580(+) CTAGCA/GTTGTA 3 -- us2k10--------
    rs773529871,2
    --97907378(+) GTTCGC/TACATC 3 -- us2k12Minor allele frequency- T:0.05CSA WA 119
    rs71178941,2
    C--97907869(+) AGCCGC/TCGCCa 4 -- ut51 us2k12Minor allele frequency- T:0.25NA WA 4
    rs1121171521,2
    C--97908012(+) AGTGCC/GTCGCA 4 -- ut51 us2k10--------
    rs1127737051,2
    --97908166(+) CGCTTC/TTCCAC 4 -- ut51 us2k11Minor allele frequency- T:0.50CSA 2
    rs1131651881,2
    F--97909320(+) CTTTTG/AAATTA 4 -- int1 us2k13Minor allele frequency- A:0.06CSA WA 122
    rs1114469251,2
    C,F--97909358(+) GAGTTG/ACGCTT 4 -- int1 us2k13Minor allele frequency- A:0.11CSA WA 122

    HapMap Linkage Disequilibrium report for YAP1 (101981192 - 102104154 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for YAP1
         1 CNV: 101319
    Human Gene Mutation Database (HGMD): YAP1

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    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Novoseek, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    YAP1 for disorders           About GeneDecksing

    OMIM gene information: 606608    OMIM disorders: --

    20/24 diseases for YAP1 (see all 24):    About MalaCards
    japanese spotted fever    spotted fever    oral squamous cell carcinoma    squamous cell carcinoma
    pancreatic ductal adenocarcinoma    huntington's disease    neurofibromatosis    liver cancer
    medulloblastoma    hepatocellular carcinoma    alzheimer's disease    ovarian cancer
    gastric cancer    meningioma    lung cancer    adenocarcinoma
    carcinoma    prostate cancer    pancreatitis    glioblastoma

    1 disease from the University of Copenhagen DISEASES database for YAP1:
    Japanese spotted fever

    2 Novoseek disease relationships for YAP1 gene    About this table

    Disease   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    tumors 31.6 20 19551889 (4), 20226166 (2), 19952108 (1), 20123905 (1) (see all 15)
    cancer 20.2 11 16596258 (3), 18703216 (3), 19371381 (1), 18953429 (1) (see all 6)

    Human Genome Epidemiology (HuGE) Navigator: YAP1 (2 documents)

    Export disorders for YAP1 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for YAP1 gene, integrated from 9 sources (see all 179):
    (articles sorted by number of sources associating them with YAP1)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Characterization of the mammalian YAP (Yes-associated protein) gene and its role in defining a novel protein module, the WW domain. (PubMed id 7782338)1, 2, 3, 9 Sudol M.... Lehman D. (1995)
    2. A coordinated phosphorylation by Lats and CK1 regulat es YAP stability through SCF(beta-TRCP). (PubMed id 20048001)1, 2, 9 Zhao B....Guan K.L. (2010)
    3. WW domain-containing protein YAP associates with ErbB-4 and acts as a co-transcriptional activator for the carboxyl-terminal fragment of ErbB-4 that translocates to the nucleus. (PubMed id 12807903)1, 2, 9 Komuro A.... Sudol M. (2003)
    4. Inactivation of YAP oncoprotein by the Hippo pathway is involved in cell contact inhibition and tissue growth control. (PubMed id 17974916)1, 2, 9 Zhao B.... Guan K.L. (2007)
    5. JNK phosphorylates Yes-associated protein (YAP) to regulate apoptosis. (PubMed id 21364637)1, 2 Tomlinson V....Basu S. (2010)
    6. Tumor suppressor LATS1 is a negative regulator of oncogene YAP. (PubMed id 18158288)1, 2 Hao Y....Yang X. (2008)
    7. Yap1 phosphorylation by c-Abl is a critical step in selective activation of proapoptotic genes in response to DNA damage. (PubMed id 18280240)1, 2 Levy D....Shaul Y. (2008)
    8. Global, in vivo, and site-specific phosphorylation dynamics in signaling networks. (PubMed id 17081983)1, 2 Olsen J.V....Mann M. (2006)
    9. Solution structures of the YAP65 WW domain and the variant L30 K in complex with the peptides GTPPPPYTVG, N-(n-octyl)-GPPPY and PLPPY and the application of peptide libraries reveal a minimal binding epitope. (PubMed id 11743730)1, 2 Pires J.R.... Oschkinat H. (2001)
    10. Characterization of the WW domain of human Yes-associated protein and its polyproline containing ligands. (PubMed id 9202023)1, 2 Chen H.I.... Sudol M. (1997)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Disorders
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 10413 HGNC: 16262 AceView: YAP1 Ensembl:ENSG00000137693 euGenes: HUgn10413
    ECgene: YAP1 H-InvDB: YAP1

    (According to HUGE)
    About This Section
      --

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for YAP1 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for YAP1 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for YAP1 gene:
    Search GeneIP for patents involving YAP1

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



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    About This Section

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