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Aliases for YAE1D1 Gene

Aliases for YAE1D1 Gene

  • Yae1 Domain Containing 1 2 3
  • C7orf36 3 4
  • Chromosome 7 Open Reading Frame 36 2
  • Yae1 Domain-Containing Protein 1 3
  • GK003 3

External Ids for YAE1D1 Gene

Previous Symbols for YAE1D1 Gene

  • C7orf36

Summaries for YAE1D1 Gene

GeneCards Summary for YAE1D1 Gene

YAE1D1 (Yae1 Domain Containing 1) is a Protein Coding gene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for YAE1D1 Gene

Genomics for YAE1D1 Gene

Genomic Location for YAE1D1 Gene

Start:
39,566,376 bp from pter
End:
39,612,089 bp from pter
Size:
45,714 bases
Orientation:
Plus strand

Genomic View for YAE1D1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for YAE1D1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for YAE1D1 Gene

No data available for Regulatory Elements for YAE1D1 Gene

Proteins for YAE1D1 Gene

  • Protein details for YAE1D1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9NRH1-YAED1_HUMAN
    Recommended name:
    Yae1 domain-containing protein 1
    Protein Accession:
    Q9NRH1
    Secondary Accessions:
    • A4D1W4
    • B4DE83
    • Q6IAF7
    • Q8WVZ5

    Protein attributes for YAE1D1 Gene

    Size:
    226 amino acids
    Molecular mass:
    25299 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for YAE1D1 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for YAE1D1 Gene

Proteomics data for YAE1D1 Gene at MOPED

Post-translational modifications for YAE1D1 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for YAE1D1 Gene

No data available for DME Specific Peptides for YAE1D1 Gene

Domains for YAE1D1 Gene

Protein Domains for YAE1D1 Gene

InterPro:
ProtoNet:
genes like me logo Genes that share domains with YAE1D1: view

No data available for Gene Families and UniProtKB/Swiss-Prot for YAE1D1 Gene

Function for YAE1D1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for YAE1D1 Gene

Localization for YAE1D1 Gene

No data available for Gene Ontology (GO) - Cellular Components for YAE1D1 Gene

Pathways for YAE1D1 Gene

SuperPathways for YAE1D1 Gene

No Data Available

Gene Ontology (GO) - Biological Process for YAE1D1 Gene

None

No data available for Pathways by source for YAE1D1 Gene

Transcripts for YAE1D1 Gene

Unigene Clusters for YAE1D1 Gene

Yae1 domain containing 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for YAE1D1 Gene

No ASD Table

Relevant External Links for YAE1D1 Gene

GeneLoc Exon Structure for
YAE1D1
ECgene alternative splicing isoforms for
YAE1D1

Expression for YAE1D1 Gene

mRNA expression in normal human tissues for YAE1D1 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, MOPED, and MaxQB for YAE1D1 Gene

SOURCE GeneReport for Unigene cluster for YAE1D1 Gene Hs.83313

genes like me logo Genes that share expressions with YAE1D1: view

Orthologs for YAE1D1 Gene

This gene was present in the common ancestor of chordates.

Orthologs for YAE1D1 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia C7H7ORF36 37
  • 99 (a)
OneToOne
YAE1D1 36
  • 99.56 (n)
  • 99.12 (a)
cow
(Bos Taurus)
Mammalia YAE1D1 36
  • 89.38 (n)
  • 83.19 (a)
YAE1D1 37
  • 83 (a)
OneToOne
dog
(Canis familiaris)
Mammalia YAE1D1 36
  • 89.23 (n)
  • 84.07 (a)
YAE1D1 37
  • 84 (a)
OneToOne
mouse
(Mus musculus)
Mammalia Gm6505 37
  • 69 (a)
OneToMany
Yae1d1 36
  • 79.48 (n)
  • 70.37 (a)
Yae1d1 16
Yae1d1 37
  • 70 (a)
OneToMany
oppossum
(Monodelphis domestica)
Mammalia YAE1D1 37
  • 60 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia YAE1D1 37
  • 52 (a)
OneToOne
chicken
(Gallus gallus)
Aves C2H7ORF36 36
  • 60.61 (n)
  • 45.45 (a)
YAE1D1 37
  • 45 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia YAE1D1 37
  • 46 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia yae1d1 36
  • 53.27 (n)
  • 40.65 (a)
zebrafish
(Danio rerio)
Actinopterygii fam105ba 36
  • 48.64 (n)
  • 31.58 (a)
fam105ba 37
  • 29 (a)
OneToOne
Species with no ortholog for YAE1D1:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for YAE1D1 Gene

ENSEMBL:
Gene Tree for YAE1D1 (if available)
TreeFam:
Gene Tree for YAE1D1 (if available)

Paralogs for YAE1D1 Gene

No data available for Paralogs for YAE1D1 Gene

Variants for YAE1D1 Gene

Sequence variations from dbSNP and Humsavar for YAE1D1 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type MAF
rs2971 -- 39,570,642(-) ATTTA(C/G)ACTTT intron-variant
rs748716 -- 39,573,850(-) TTCAG(C/T)GGGGG intron-variant
rs1051162 -- 39,566,508(+) CTGGC(A/G)CAGCG synonymous-codon, reference
rs1128860 -- 39,567,640(-) TAACC(A/C)CTTCA intron-variant
rs2288743 -- 39,570,206(+) CTGCC(A/G)CTTGC intron-variant

Relevant External Links for YAE1D1 Gene

HapMap Linkage Disequilibrium report
YAE1D1
Human Gene Mutation Database (HGMD)
YAE1D1

No data available for Structural Variations from Database of Genomic Variants (DGV) for YAE1D1 Gene

Disorders for YAE1D1 Gene

No disorders were found for YAE1D1 Gene.

No data available for UniProtKB/Swiss-Prot for YAE1D1 Gene

Publications for YAE1D1 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 2 3
  2. Human chromosome 7: DNA sequence and biology. (PMID: 12690205) Scherer S.W. … Tsui L.-C. (Science 2003) 3 4
  3. The DNA sequence of human chromosome 7. (PMID: 12853948) Hillier L.W. … Wilson R.K. (Nature 2003) 3 4
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4
  5. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4

Products for YAE1D1 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate YAE1D1
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for YAE1D1
    • Block miRNA regulation of YAE1D1 using miScript Target Protectors

    Sources for YAE1D1 Gene

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