Free for academic non-profit institutions. Other users need a Commercial license

GCID:
GC0XM099461
GIFtS:
15

XRCC6P5 Gene(Pseudogene)

X-Ray Repair Complementing Defective Repair In Chinese Hamster Cells 6 Pseudogene 5

Aliases for XRCC6P5 Gene

Aliases for XRCC6P5 Gene

  • X-Ray Repair Complementing Defective Repair In Chinese Hamster Cells 6 Pseudogene 5 2 3

External Ids for XRCC6P5 Gene

Previous GeneCards Identifiers for XRCC6P5 Gene

  • GC0XM098718

Summaries for XRCC6P5 Gene

GeneCards Summary for XRCC6P5 Gene

XRCC6P5 (X-Ray Repair Complementing Defective Repair In Chinese Hamster Cells 6 Pseudogene 5) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for XRCC6P5 Gene

Genomics for XRCC6P5 Gene

Genomic Location for XRCC6P5 Gene

Start:
99,461,602 bp from pter
End:
99,939,843 bp from pter
Size:
478,242 bases
Orientation:
Minus strand

Genomic View for XRCC6P5 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for XRCC6P5 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for XRCC6P5 Gene

No data available for Regulatory Elements for XRCC6P5 Gene

Proteins for XRCC6P5 Gene

Post-translational modifications for XRCC6P5 Gene

No Post-translational modifications

No data available for DME Specific Peptides for XRCC6P5 Gene

Domains for XRCC6P5 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for XRCC6P5 Gene

Function for XRCC6P5 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for XRCC6P5 Gene

Localization for XRCC6P5 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for XRCC6P5 Gene

Pathways for XRCC6P5 Gene

SuperPathways for XRCC6P5 Gene

No Data Available

Interacting Proteins for XRCC6P5 Gene

Gene Ontology (GO) - Biological Process for XRCC6P5 Gene

None

No data available for Pathways by source for XRCC6P5 Gene

Transcripts for XRCC6P5 Gene

mRNA/cDNA for XRCC6P5 Gene

(1) REFSEQ mRNAs :
(2) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for XRCC6P5 Gene

X-ray repair complementing defective repair in Chinese hamster cells 6 pseudogene 5:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for XRCC6P5 Gene

No ASD Table

Relevant External Links for XRCC6P5 Gene

GeneLoc Exon Structure for
XRCC6P5
ECgene alternative splicing isoforms for
XRCC6P5

Expression for XRCC6P5 Gene

mRNA expression in normal human tissues for XRCC6P5 Gene

SOURCE GeneReport for Unigene cluster for XRCC6P5 Gene Hs.706599

genes like me logo Genes that share expressions with XRCC6P5: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for XRCC6P5 Gene

Orthologs for XRCC6P5 Gene

Evolution for XRCC6P5 Gene

ENSEMBL:
Gene Tree for XRCC6P5 (if available)
TreeFam:
Gene Tree for XRCC6P5 (if available)

No data available for Orthologs for XRCC6P5 Gene

Paralogs for XRCC6P5 Gene

No data available for Paralogs for XRCC6P5 Gene

Variants for XRCC6P5 Gene

Sequence variations from dbSNP and Humsavar for XRCC6P5 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs760695 -- 99,473,743(+) TTCCC(G/T)TGCAT intron-variant
rs912351 -- 99,751,744(-) GCTTT(C/T)CAAAC intron-variant
rs923700 -- 99,880,730(-) catct(G/T)caatg intron-variant
rs967074 -- 99,926,333(-) TTTTA(A/G)ATTTT intron-variant
rs974307 -- 99,907,052(-) GGTTG(C/G)TGTAC intron-variant

Relevant External Links for XRCC6P5 Gene

HapMap Linkage Disequilibrium report
XRCC6P5

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Structural Variations from Database of Genomic Variants (DGV) for XRCC6P5 Gene

Disorders for XRCC6P5 Gene

No disorders were found for XRCC6P5 Gene.

No data available for UniProtKB/Swiss-Prot for XRCC6P5 Gene

Publications for XRCC6P5 Gene

  1. The association of DNA repair gene polymorphisms with the development and progression of renal cell carcinoma. (PMID: 17712032) Sakano S. … Naito K. (Ann. Oncol. 2007) 3

Products for XRCC6P5 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate XRCC6P5
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for XRCC6P5
    • Block miRNA regulation of XRCC6P5 using miScript Target Protectors

    Sources for XRCC6P5 Gene

    Back to Top

    Content