Set Analyses:
Advanced Search

Advanced Search

 
Search By
Section (entire)
for


 
or upload a file of gene symbols


Category   Symbol Source: HGNC EntrezGene Ensembl GeneCards RNA genes CroW21
GIFtS

XPO5 Gene

protein-coding   GIFtS: 61
GCID: GC06M043490

exportin 5

 Explore 9 diseases affiliated with
XPO5 via our new
 Human Malady Compendium 
Biological research products
for XPO5
    

(According to 1HGNC, 2Entrez Gene,
3UniProtKB/Swiss-Prot, 4UniProtKB/TrEMBL, 5OMIM, 6GeneLoc, 7Ensembl, 8DME, 9miRBase, and/or 10fRNAdb)
About This Section

Aliases
Exportin 51 2     Exportin-51
KIAA12911 3 5     Exp53
Ran-Binding Protein 212 3     RANBP213
Exp53     

External Ids:    HGNC: 176751   Entrez Gene: 575102   Ensembl: ENSG000001245717   OMIM: 6078455   UniProtKB: Q9HAV43   

Export aliases for XPO5 gene to outside databases

Previous GC identifers: GC06M043492 GC06M043536 GC06M043598 GC06M043209


(According to Entrez Gene, Tocris Bioscience, Wikipedia's Gene Wiki, PharmGKB,
UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL)
About This Section

Entrez Gene summary for XPO5:
This gene encodes a member of the karyopherin family that is required for the transport of small RNAs and
double-stranded RNA-binding proteins from the nucleus to the cytoplasm. The encoded protein translocates cargo through
the nuclear pore complex in a RanGTP-dependent process. (provided by RefSeq, Aug 2011)

UniProtKB/Swiss-Prot: XPO5_HUMAN, Q9HAV4
Function: Mediates the nuclear export of proteins bearing a double-stranded RNA binding domain (dsRBD) and
double-stranded RNAs (cargos). XPO5 in the nucleus binds cooperatively to the RNA and to the GTPase Ran in its active
GTP-bound form. Proteins containing dsRBDs can associate with this trimeric complex through the RNA. Docking of this
complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of a nuclear
export complex into the cytoplasm, hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively)
cause disassembly of the complex and release of the cargo from the export receptor. XPO5 then returns to the nuclear
compartment by diffusion through the nuclear pore complex, to mediate another round of transport. The directionality
of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran
between the cytoplasm and nucleus. Overexpression may in some circumstances enhance RNA-mediated gene silencing
(RNAi). Mediates nuclear export of isoform 5 of ADAR/ADAR1 in a RanGTP-dependent manner
Function: Mediates the nuclear export of micro-RNA precursors, which form short hairpins. Also mediates the nuclear
export of synthetic short hairpin RNAs used for RNA interference, and adenovirus VA1 dsRNA. In some circumstances can
also mediate the nuclear export of deacylated and aminoacylated tRNAs. Specifically recognizes dsRNAs that lack a
5'-overhang in a sequence-independent manner, have only a short 3'-overhang, and that have a double-stranded length of
at least 15 base-pairs. Binding is dependent on Ran-GTP

Gene Wiki entry for XPO5


(According to GeneLoc and/or HGNC, and/or
Entrez Gene (NCBI build 37),
and/or miRBase,
Genomic Views according to UCSC (hg19) and Ensembl (release 69), Regulatory elements and Epigenetics data according to QIAGEN, SABiosciences, and/or SwitchGear Genomics)
About This Section
RefSeq DNA sequence:
NC_000006.11  NC_018917.1  NT_007592.15  
Regulatory elements:
   SABiosciences Regulatory transcription factor binding sites in the XPO5 gene promoter:
         Elk-1   RP58   Bach2   CUTL1   Nkx2-5   POU3F2   PPAR-gamma1   c-Myb   PPAR-gamma2   Zic3   
         Other transcription factors

SwitchGear Promoter luciferase reporter plasmidXPO5 promoter sequence
   Search SABiosciences Chromatin IP Primers for XPO5

Epigenetics:
QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat XPO5


Genomic Location:
Genomic View: UCSC Golden Path with GeneCards custom track

Entrez Gene cytogenetic band: 6p21.1   Ensembl cytogenetic band:  6p21.1   HGNC cytogenetic band: 6p21.1

XPO5 Gene in genomic location: bands according to Ensembl, locations according to (and/or Entrez Gene and/or Ensembl if different)
XPO5 gene location

GeneLoc information about chromosome 6         GeneLoc Exon Structure

GeneLoc location for GC06M043490:  view genomic region     (about GC identifiers)

Start:
43,490,068 bp from pter      End:
43,543,812 bp from pter
Size:
53,745 bases      Orientation:
minus strand

(According to 1UniProtKB, HORDE, neXtProt, Ensembl, and/or Reactome, Modification sites according to 2PhosphoSitePlus, Specific Peptides from DME, Protein expression images according to data from SPIRE MOPED and PaxDb, RefSeq according to NCBI, PDB rendering according to OCA and/or Proteopedia, Recombinant Proteins from EMD Millipore, R&D Systems, GenScript, Enzo Life Sciences, OriGene, Novus Biologicals, Sino Biological, ProSpec, and/or Uscn,
Biochemical Assays by EMD Millipore, R&D Systems, OriGene, GenScript, Cell Signaling Technology, Enzo Life Sciences, and/or Uscn, Ontologies according to Gene Ontology Consortium 01 Mar 2013 and Entrez Gene, Antibodies by EMD Millipore, R&D Systems, GenScript, Cell Signaling Technology, OriGene, Novus Biologicals, Thermo Fisher Scientific, Abcam, and/or Uscn)
About This Section

UniProtKB/Swiss-Prot: XPO5_HUMAN, Q9HAV4 (See protein sequence)
Recommended Name: Exportin-5  
Size: 1204 amino acids; 136311 Da
Subunit: Component of a nuclear export receptor complex composed of XPO5, Ran, dsRNA-binding proteins and dsRNA. Found
in a nuclear export complex with XPO5, Ran, EEF1A1, and aminoacylated tRNA. Found in a nuclear export complex with
XPO5, Ran, ILF3 and dsRNA. Found in a nuclear export complex with XPO5, Ran and pre-miRNA. Found in a nuclear export
complex with XPO5, Ran, ILF3 and minihelix VA1 dsRNA. Found in a nuclear export complex with XPO5, RAN, ILF3, ZNF346
and dsRNA. Interacts with EEF1A1, ILF3, NUP153, NUP214 and ZNF346. Interacts with Ran and cargo proteins in a
GTP-dependent manner. Interacts with isoform 5 of ADAR/ADAR1 (via DRBM domains)
Subcellular location: Nucleus. Cytoplasm. Note=Shuttles between the nucleus and the cytoplasm
Sequence caution: Sequence=AAH00129.1; Type=Erroneous initiation; Sequence=BAA86605.2; Type=Erroneous initiation;
Sequence=BAA91547.1; Type=Frameshift; Positions=920; Sequence=CAI42640.1; Type=Erroneous gene model prediction;
1 PDB 3D structure from and Proteopedia for XPO5:
3A6P (3D)    
Secondary accessions: Q5JTE6 Q96G48 Q96HN3 Q9BWM6 Q9BZV5 Q9H9M4 Q9NT89 Q9NW39 Q9ULC9

Explore the universe of human proteins at neXtProt for XPO5: NX_Q9HAV4

Post-translational modifications:

  • View modification sites using PhosphoSitePlus2
  • View neXtProt modification sites for NX_Q9HAV4

  • XPO5 Protein expression data from MOPED and PaxDb:    About this image 
    Estimated protein expression log10 (pmol).

    REFSEQ proteins: NP_065801.1  
    ENSEMBL proteins: 
     ENSP00000265351   ENSP00000426185   ENSP00000387384   ENSP00000381816   ENSP00000424196  
     ENSP00000381779  
    Reactome Protein details: Q9HAV4
    Human Recombinant Protein Products: 
    Browse Purified and Recombinant Proteins at EMD Millipore
    Browse R&D Systems for human recombinant proteins
    Browse recombinant and purified proteins available from Enzo Life Sciences
    Browse OriGene full length recombinant human proteins expressed in human HEK293 cells
    Browse OriGene Protein Over-expression Lysates
    OriGene Custom Protein Services for XPO5 
    GenScript Custom Purified and Recombinant Proteins Services for XPO5
    Novus Biologicals XPO5 Protein
    Novus Biologicals XPO5 Lysates
    Browse Sino Biological Recombinant Proteins
    Browse ProSpec Recombinant Proteins
    Uscn Proteins for XPO5

    Gene Ontology (GO): 5/6 cellular component terms (GO ID links to tree view) (see all 6):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0005634nucleus IDA--
    GO:0005643nuclear pore IEA--
    GO:0005654nucleoplasm TAS--
    GO:0005730NOT nucleolus IDA--
    GO:0005737cytoplasm IDA--


    XPO5 for ontologies           About GeneDecksing



    XPO5 Antibody Products: 
    Browse EMD Millipore's Extensive Line of Mono- and Polyclonal Antibodies
    Browse R&D Systems for Antibodies
    Cell Signaling Technology (CST) Antibodies for XPO5  (exportin 5)
    OriGene Antibodies: XPO5
    OriGene Custom Antibody Services for XPO5 
    GenScript Custom Superior Antibodies Services for XPO5
    Novus Biologicals XPO5 Antibodies
    Abcam antibodies for XPO5 
    Uscn Antibodies for XPO5
    Search ThermoFisher Antibodies for XPO5

    Assay Products for XPO5: 
    Browse Kits and Assays available from EMD Millipore
    OriGene Custom Immunoassay Development
    Browse OriGene Fluorogenic Cell Assay Kits
    Browse R&D Systems for biochemical assays
    GenScript Custom Assay Services for XPO5
    Browse Enzo Life Sciences for kits & assays
    Uscn ELISAs and CLIAs for XPO5


    (According to InterPro, ProtoNet, UniProtKB, and/or BLOCKS, Sets of similar genes according to GeneDecks)
    About This Section

    XPO5 for domains           About GeneDecksing

    4 InterPro domains/families:
     IPR011989 ARM-like
     IPR013598 Exportin-1/Importin-b-like
     IPR001494 Importin-beta_N
     IPR016024 ARM-type_fold

    Graphical View of Domain Structure for InterPro Entry Q9HAV4

    ProtoNet protein and cluster: Q9HAV4

    UniProtKB/Swiss-Prot: XPO5_HUMAN, Q9HAV4
    Similarity: Belongs to the exportin family


    (According to 1UniProtKB, Genatlas, LifeMap Discovery™, IUBMB, and/or 2DME, Human phenotypes from GenomeRNAi, Animal models from MGI Mar 06 2013,
    bound targets from SABiosciences, miRNA Gene Targets from miRTarBase shRNA from OriGene, RNAi from EMD Millipore, siRNAs from OriGene, QIAGEN, microRNA from QIAGEN, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, SwitchGear Genomics, GenScript, Sino Biological, DNA2.0, and Vector BioLabs, Cell Lines from GenScript, LifeMap BioReagents, In Situ Hybridization Assays from Advanced Cell Diagnostics, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene.)
    About This Section

    Function Summary:

         UniProtKB/Swiss-Prot: XPO5_HUMAN, Q9HAV4
    Function: Mediates the nuclear export of proteins bearing a double-stranded RNA binding domain (dsRBD) and
    double-stranded RNAs (cargos). XPO5 in the nucleus binds cooperatively to the RNA and to the GTPase Ran in its active
    GTP-bound form. Proteins containing dsRBDs can associate with this trimeric complex through the RNA. Docking of this
    complex to the nuclear pore complex (NPC) is mediated through binding to nucleoporins. Upon transit of a nuclear
    export complex into the cytoplasm, hydrolysis of Ran-GTP to Ran-GDP (induced by RANBP1 and RANGAP1, respectively)
    cause disassembly of the complex and release of the cargo from the export receptor. XPO5 then returns to the nuclear
    compartment by diffusion through the nuclear pore complex, to mediate another round of transport. The directionality
    of nuclear export is thought to be conferred by an asymmetric distribution of the GTP- and GDP-bound forms of Ran
    between the cytoplasm and nucleus. Overexpression may in some circumstances enhance RNA-mediated gene silencing
    (RNAi). Mediates nuclear export of isoform 5 of ADAR/ADAR1 in a RanGTP-dependent manner
    Function: Mediates the nuclear export of micro-RNA precursors, which form short hairpins. Also mediates the nuclear
    export of synthetic short hairpin RNAs used for RNA interference, and adenovirus VA1 dsRNA. In some circumstances can
    also mediate the nuclear export of deacylated and aminoacylated tRNAs. Specifically recognizes dsRNAs that lack a
    5'-overhang in a sequence-independent manner, have only a short 3'-overhang, and that have a double-stranded length of
    at least 15 base-pairs. Binding is dependent on Ran-GTP

    miRNA
    Products:
        
    OriGene 3'-UTR Clone: XPO5
    Browse MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat XPO5
    8/44 QIAGEN miScript miRNA Assays for microRNAs that regulate XPO5 (see all 44):
    hsa-miR-576-3p hsa-miR-100* hsa-miR-513a-5p hsa-miR-29a hsa-miR-218 hsa-miR-766 hsa-miR-449a hsa-miR-4267
    SwitchGear 3'UTR luciferase reporter plasmidXPO5 3' UTR sequence
    Inhib. RNA
    Products:
        
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for XPO5 (see all 6)
    OriGene shRNA RFP: XPO5
    OriGene siRNA: XPO5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat XPO5

    Gene Editing
    Products:
    DNA2.0 Custom Protein Engineering Service for XPO5

    Clone
    Products:
         
    Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for XPO5 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for XPO5
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: XPO5 (NM_020750)
    Browse Sino Biological Human cDNA Clones
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for XPO5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat XPO5 

    Cell Line
    Products:
         
    GenScript Custom overexpressing Cell Line Services for XPO5
    Search LifeMap BioReagents cell lines for XPO5

    In Situ Assay
    Products:
       

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for XPO5

    Gene Ontology (GO): 4 molecular function terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0000049tRNA binding IEA--
    GO:0003723RNA binding TAS--
    GO:0005515protein binding IPI19124606
    GO:0008565protein transporter activity IEA--


    XPO5 for ontologies           About GeneDecksing


    3 GenomeRNAi human phenotypes for XPO5:
     Increased G1 DNA content  Increased gamma-H2AX phosphory  Nuclear 60S biogenesis defects 


    (Pathways according to EMD Millipore, R&D Systems, Cell Signaling Technology, KEGG, PharmGKB, BioSystems, Reactome, Tocris Bioscience, GeneGo (Thomson Reuters), QIAGEN, and/or UniProtKB, Sets of similar genes according to GeneDecks, Interaction Networks according to SABiosciences, and/or STRING, Interactions according to 1UniProtKB, 2MINT, 3I2D, and/or 4STRING, with links to IntAct and Ensembl, Ontologies according to Gene Ontology Consortium 01 Mar 2013 via Entrez Gene).
    About This Section

    Unified GeneCards pathways  About this table 
    See pathways by source

    Super-pathwaycontained gene-specific pathways
    1Regulatory RNA pathways
    Regulatory RNA pathways1.00
    MicroRNA (miRNA) Biogenesis0.88
    2RNA transport
    RNA transport1.00
    3Translational Control
    Translational Control1.00
    4Generic Transcription Pathway
    Gene Expression0.46

    Pathway sources
    See GeneCards unified pathways
    Show all pathways


    1 Cell Signaling Technology (CST) Pathway for XPO5
        Translational Control

    3        Reactome Pathways for XPO5
        MicroRNA (miRNA) Biogenesis
    Regulatory RNA pathways
    Gene Expression


    1         Kegg Pathway  (Kegg details for XPO5):
        RNA transport


    XPO5 for pathways           About GeneDecksing

    Interactions:

        SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for XPO5

    STRING Interaction Network Preview (showing 5 interactants - click image to see 21)

    5/631 Interacting proteins for XPO5 (Q9HAV42, 3 ENSP000002653514) via UniProtKB, MINT, STRING, and/or I2D (see all 631)
    InteractantInteraction Details
    GeneCardExternal ID(s)
    FADDQ131582, 3, ENSP000003018384MINT-45871 I2D: score=3 STRING: ENSP00000301838
    ACTBP607092, 3MINT-7947479 I2D: score=2 
    DNAJA1P316892, 3MINT-7947479 I2D: score=2 
    HSP90AA1P079002, 3MINT-7947479 I2D: score=2 
    IKBKGQ9Y6K92, 3MINT-48212 I2D: score=2 
    About this table

    Gene Ontology (GO): 3 biological process terms (GO ID links to tree view):    About this table

    GO IDQualified GO termEvidencePubMed IDs
    GO:0006611protein export from nucleus IEA--
    GO:0010467gene expression TAS--
    GO:0031047gene silencing by RNA IEA--


    XPO5 for ontologies           About GeneDecksing



    (Chemical Compounds according to UniProtKB, Enzo Life Sciences, EMD Millipore, Tocris Bioscience HMDB, BitterDB, and/or Novoseek, and Drugs according to DrugBank, Enzo Life Sciences, and/or PharmGKB, with drugs/clinical trials/news search links to CenterWatch)
    About This Section

    XPO5 for compounds           About GeneDecksing

    Browse Small Molecules at EMD Millipore
    Browse drugs & compounds from Enzo Life Sciences

    Browse Tocris compounds for XPO5

    1 HMDB Compound for XPO5    About this table
    CompoundSynonyms CAS #PubMed Ids
    Guanosine triphosphate5'-GTP (see all 10)86-01-1--
    1 Novoseek chemical compound relationship for XPO5 gene    About this table
    Compound   -log (P-Val)   Hits   PubMed IDs for Articles with Shared Sentences (# sentences)
    trna 41.5 2 16963774 (1)

    Search CenterWatch for drugs/clinical trials and news about XPO5 

    (Secondary structures according to fRNAdb,
    GenBank/EMBL/DDBJ Accessions according to
    Unigene (Build 235 Homo sapiens; Mar 10 2013) or GenBank,
    RefSeq according to Entrez Gene,
    DOTS (version 10), and/or AceView, transcript ids from Ensembl with links to UCSC,
    exon structure from GeneLoc, alternative splicing isoforms according to ASD and/or ECgene,
    RNAi Products from EMD Millipore,
    siRNAs from OriGene, QIAGEN, shRNA from OriGene, microRNA from QIAGEN,
    Tagged/untagged cDNA clones from OriGene, SwitchGear Genomics, GenScript, DNA2.0, Vector BioLabs, Primers from OriGene, SABiosciences, and/or QIAGEN )
    About This Section

    REFSEQ mRNAs for XPO5 gene: 
    NM_020750.2  

    Unigene Cluster for XPO5:

    Exportin 5
    Hs.203206  [show with all ESTs]
    Unigene Representative Sequence: NM_020750
    12 Ensembl transcripts including schematic representations, and UCSC links where relevant:
    ENST00000265351(uc003ovp.3) ENST00000455854 ENST00000488195 ENST00000486936
    ENST00000455285 ENST00000450462 ENST00000398835 ENST00000515657 ENST00000513451
    ENST00000496341 ENST00000424378 ENST00000398799

    miRNA
    Products:
         
    OriGene 3'-UTR Clone: XPO5
    Browse OriGene MicroRNA Expression Plasmids
    QIAGEN Custom miScript Target Protector blocks miRNA-binding site of human, mouse, rat XPO5
    8/44 QIAGEN miScript miRNA Assays for microRNAs that regulate XPO5 (see all 44):
    hsa-miR-576-3p hsa-miR-100* hsa-miR-513a-5p hsa-miR-29a hsa-miR-218 hsa-miR-766 hsa-miR-449a hsa-miR-4267
    SwitchGear 3'UTR luciferase reporter plasmidXPO5 3' UTR sequence
    Inhib. RNA
    Products:
         
    Browse for Gene Knock-down Tools from EMD Millipore
    OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for XPO5 (see all 6)
    OriGene shRNA RFP: XPO5
    OriGene siRNA: XPO5
    QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat XPO5
    Clone
    Products:
         
    OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for XPO5 (see all 3)
    OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for XPO5
    OriGene custom cloning services – gene synthesis, subcloning, mutagenesis, variant library, vector shuttling 
    GenScript: all cDNA clones in your preferred vector: XPO5 (NM_020750)
    DNA2.0 Custom Codon Optimized Gene Synthesis Service for XPO5
    Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat XPO5 
    Primer
    Products:
        
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for XPO5
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat XPO5
      QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat XPO5
      QIAGEN QuantiFast Probe-based Assays in human, mouse, rat XPO5

    Additional cDNA sequence: 

    AB033117.2 AF271159.1 AF298880.1 AK001195.1 AK022718.1 AK023431.1 AK024301.1 AK025864.1 
    AK127513.1 AK291452.1 AL137467.1 AL834207.1 BC000129.1 BC008347.1 BC009969.2 BC062635.1 

    24/25 DOTS entries (see all 25):

    DT.101970772  DT.100811606  DT.117479  DT.100811608  DT.99995909  DT.99997262  DT.121405758  DT.91659446 
    DT.121405494  DT.101980818  DT.121405378  DT.100037823  DT.121405666  DT.100811605  DT.121405328  DT.40269817 
    DT.92447587  DT.92447592  DT.92447595  DT.100811609  DT.75131516  DT.75157158  DT.92447588  DT.92447594 

    24/327 AceView cDNA sequences (see all 327):

    AA828272 AA401199 AU125578 CA419664 AL137467 BM558485 CA442986 AU125748 
    AI686140 BU168979 BQ673134 BM783751 BQ181467 BP365133 CD108862 BU734554 
    AW083527 AA827763 CA439555 BQ069528 BM127692 BC000129 AA709255 BM791592 

    GeneLoc Exon Structure


    (RNA expression data according to H-InvDB, NONCODE, miRBase, and RNAdb, Expression images according to data from BioGPS, Illumina Human BodyMap, and CGAP SAGE, Sets of similar genes according to GeneDecks, in vivo and in vitro expression data from LifeMap Discovery™, plus additional links to Genevestigator, and/or SOURCE, and/or BioGPS, and/or UniProtKB,
    PCR Arrays from SABiosciences, Primers from OriGene, SABiosciences, and/or QIAGEN, In Situ Hybridization Assays from Advanced Cell Diagnostics)
    About This Section

    XPO5 expression in normal human tissues (normalized intensities)
    See probesets specificity/sensitivity at GeneAnnot
    About this imageBioGPS
    CGAP TAG: TCAGTAAAAA

    Microarray
    RNAseq (Illumina Body Map)
    (100×FPKM)½
    SAGE (Serial Analysis of Gene Expression)

    About this image
    See XPO5 Protein Expression from SPIRE MOPED and PaxDB
    Genevestigator expression for XPO5

    SOURCE GeneReport for Unigene cluster: Hs.203206

    UniProtKB/Swiss-Prot: XPO5_HUMAN, Q9HAV4
    Tissue specificity: Expressed in heart, brain, placenta, lung, skeletal muscle, kidney and pancreas

        SABiosciences Custom PCR Arrays for XPO5
    Primer
    Products:
    OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for XPO5
    Browse OriGene validated miRNA SYBR primer pairs
    SABiosciences RT2 qPCR Primer Assay in human, mouse, rat XPO5
    QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat XPO5
    QIAGEN QuantiFast Probe-based Assays in human, mouse, rat XPO5
    In Situ
    Assay Products:
     

     
    Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for XPO5

    (Orthologs according to 1,2HomoloGene (2older version, for species not in 1newer version), 3euGenes, 4SGD , 5MGI Mar 06 2013, with possible further links to Flybase and/or WormBase, and/or 6Ensembl pan taxonomic compara , Gene Trees according to Ensembl and TreeFam)
    About This Section

    This gene was present in the common ancestor of eukaryotes.

    Orthologs for XPO5 gene from 8/26 species (see all 26)    About this table
    Organism Taxonomic
    classification
    Gene Description Human
    Similarity
    Orthology
    Type
    Details
    mouse
    (Mus musculus)
    Mammalia Xpo51 , 5 exportin 51, 5 86.52(n)1
    87.71(a)1
      17 (22.90 cM)5
    723221  NM_028198.21  NP_082474.11 
     462028555 
    chicken
    (Gallus gallus)
    Aves XPO51 exportin 5 76.59(n)
    83.69(a)
      421450  XM_419501.3  XP_419501.2 
    lizard
    (Anolis carolinensis)
    Reptilia XPO56
    --
    80(a)
    1 ↔ 1
    1(230970033-231020784)
    African clawed frog
    (Xenopus laevis)
    Amphibia BQ884365.12   -- 85.71(n)    BQ884365.1 
    zebrafish
    (Danio rerio)
    Actinopterygii xpo51 exportin 5 64.07(n)
    61.62(a)
      558662  XM_001921387.3  XP_001921422.3 
    fruit fly
    (Drosophila melanogaster)
    Insecta Ranbp211 , 3 RAN protein binding3
    CG12234-PA1
    35(a)3
    47.29(n)1
    37.29(a)1
      329701  NM_134495.21  NP_608339.21 
    thale cress
    (Arabidopsis thaliana)
    eudicotyledons HST1 protein HASTY 38.52(n)
    24.49(a)
      819666  NM_111376.3  NP_187155.2 
    rice
    (Oryza sativa)
    Liliopsida Os01g03639001 hypothetical protein 37.64(n)
    23.12(a)
      4325820  NM_001049569.1  NP_001043034.1 


    ENSEMBL Gene Tree for XPO5 (if available)
    TreeFam Gene Tree for XPO5 (if available) 

    (Paralogs according to 1HomoloGene,
    2Ensembl, and 3SIMAP, Pseudogenes according to 4Pseudogene.org Build 68)
    About This Section
      --

    (SNPs/Variants according to the 1NCBI SNP Database, 2Ensembl, 3PupaSUITE, UniProtKB, and DNA2.0, Linkage Disequilibrium by HapMap, Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants, Mutations from the Human Gene Mutation Database (HGMD) and the Locus Specific Mutation Databases (LSDB), Blood group antigen gene mutations by BGMUT, Resequencing Primers from QIAGEN, Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences)
    About This Section

    10/861 NCBI SNPs in XPO5 are shown (see all 861    About this table
    Genomic DataTranscription Related DataAllele Frequencies
    SNP IDValidClinical
    significance
    Chr 6 posSequence#AA
    Chg
    TypeMore#Allele
    freq
    PopTotal
    sample
    More
    ----------
    rs2018731371,2
    Cother43516084(+) TTAAAA/G/TTGGTT 3 Q H mis11EU 569
    rs1858604291,2
    --43489830(+) CAGTAA/GCAATT 1 -- int10--------
    rs1409454871,2
    C,--43489854(+) CCCAG-/CAGC  
            
    CACAC
    1 -- int10--------
    rs758343371,2
    F,--43489994(+) TGTTTT/CAGTCC 1 -- int11Minor allele frequency- C:0.02WA 118
    rs31771641,2
    C--43490075(-) GTACAG/AAAAGG 1 -- ut31 ese31Minor allele frequency- A:0.00NA 2
    rs1904897461,2
    --43490081(+) TGTACA/GAAACT 1 -- ut310--------
    rs1441280301,2
    --43490198(+) TTACAA/GTGCAA 1 -- ut310--------
    rs1830565141,2
    --43490369(+) CTTTGA/CTTCTT 1 -- ut310--------
    rs1123031741,2
    C,--43490502(+) CACATG/AGACAC 1 -- ut312Minor allele frequency- A:0.09CSA WA 120
    rs794402621,2
    C,--43490540(+) CTTACG/AGCCAG 1 -- ut313Minor allele frequency- A:0.14CSA WA 121

    HapMap Linkage Disequilibrium report for XPO5 (43490068 - 43543812 bp)
    Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions)
    Database of Genomic Variants (DGV): 1 variation for XPO5
         1 CNV: 9530
    Human Gene Mutation Database (HGMD): XPO5

    SABiosciences Cancer Mutation PCR Assays
    QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing XPO5
    DNA2.0 Custom Variant and Variant Library Synthesis for XPO5

    (in which this Gene is Involved, According to MalaCards, OMIM, UniProtKB, the University of Copenhagen DISEASES database, Genatlas, GeneTests, GAD, HuGE Navigator, and/or TGDB.)
    About This Section

    XPO5 for disorders           About GeneDecksing

    OMIM gene information: 607845    OMIM disorders: --

    9 diseases for XPO5:    About MalaCards
    pleuropulmonary blastoma    blastoma    muscle hypertrophy    renal cell carcinoma
    esophageal cancer    esophagitis    colon cancer    lung cancer
    carcinoma

    1 disease from the University of Copenhagen DISEASES database for XPO5:
    Pleuropulmonary blastoma
    Human Genome Epidemiology (HuGE) Navigator: XPO5 (8 documents)

    Export disorders for XPO5 gene to outside databases

    (in PubMed. Associations of this gene to articles via 1Entrez Gene, 2UniProtKB/Swiss-Prot, 3HGNC, 4GAD, 5PharmGKB, 6HMDB, 7DrugBank, 8UniProtKB/TrEMBL, 9 Novoseek, and/or 10fRNAdb)
    About This Section

    PubMed articles for XPO5 gene, integrated from 9 sources (see all 66):
    (articles sorted by number of sources associating them with XPO5)
        Utopia: connect your pdf to the dynamic
    world of online information

    1. Exportin-5, a novel karyopherin, mediates nuclear export of double- stranded RNA binding proteins. (PubMed id 11777942)1, 2, 3, 9 Brownawell A.M. and Macara I.G. (2002)
    2. Exp5 exports eEF1A via tRNA from nuclei and synergizes with other transport pathways to confine translation to the cytoplasm. (PubMed id 12426392)1, 2, 3, 9 Bohnsack M.T.... Goerlich D. (2002)
    3. Nucleocytoplasmic shuttling of JAZ, a new cargo protein for exportin- 5. (PubMed id 15254228)1, 2, 9 Chen T.... Macara I.G. (2004)
    4. Overexpression of exportin 5 enhances RNA interference mediated by short hairpin RNAs and microRNAs. (PubMed id 15613540)1, 2, 9 Yi R.... Cullen B.R. (2005)
    5. Exportin-5 mediates the nuclear export of pre-microRNAs and short hairpin RNAs. (PubMed id 14681208)1, 2, 9 Yi R.... Cullen B.R. (2003)
    6. Exportin 5 is a RanGTP-dependent dsRNA-binding protein that mediates nuclear export of pre-miRNAs. (PubMed id 14730017)1, 2, 9 Bohnsack M.T.... Goerlich D. (2004)
    7. Minihelix-containing RNAs mediate exportin-5-dependent nuclear export of the double-stranded RNA-binding protein ILF3. (PubMed id 14570900)1, 2, 9 Gwizdek C....Dargemont C. (2004)
    8. RNA-regulated interaction of transportin-1 and exportin-5 with the double-stranded RNA-binding domain regulates nucleocytoplasmic shuttling of ADAR1. (PubMed id 19124606)1, 2, 9 Fritz J....Jantsch M.F. (2009)
    9. Nuclear export of microRNA precursors. (PubMed id 14631048)1, 2, 9 Lund E.... Kutay U. (2004)
    10. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039)1, 2 Ota T.... Sugano S. (2004)

    (in PubMed, OMIM, and NCBI Bookshelf)
    About This Section
     ANDOR
    Aliases
    Free Text  

      Query String
    PubMed
    OMIM
    NCBI Bookshelf
      (Note: In FireFox, select the above section and copy using Ctrl-C)

    (According to Entrez Gene, HGNC, AceView, euGenes, Ensembl, miRBase, ECgene, Kegg, and/or H-InvDB)
    About This Section
    Entrez Gene: 57510 HGNC: 17675 AceView: XPO5 Ensembl:ENSG00000124571 euGenes: HUgn57510
    ECgene: XPO5 Kegg: 57510 H-InvDB: XPO5

    (According to HUGE)
    About This Section
    HUGE: KIAA1291

    (According to PharmGKB, ATLAS, HORDE, IMGT, LEIDEN, UniProtKB/Swiss-Prot, and/or UniProtKB/TrEMBL,
    Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot)
    About This Section
    NameDescription
    PharmGKB entry for XPO5 Pharmacogenomics, SNPs, Pathways
    ATLAS Chromosomes in Cancer entry for XPO5 Genetics and Cytogenetics in Oncology and Haematology

    (Patent information from GeneIP,
    Licensable technologies from WIS Yeda, Salk, Tufts,
    IP news from LifeMap Sciences, Inc.)
    About This Section
    Patent Information for XPO5 gene:
    Search GeneIP for patents involving XPO5

    GeneCards and IP:
    Japan Patent Office Licenses GeneCards     European Patent Office Licenses GeneCards     Improving the IP Search



    (Antibodies, recombinant proteins, and assays from EMD Millipore, R&D Systems, OriGene, QIAGEN, GenScript, Cell Signaling Technology, SABiosciences, Novus Biologicals, Sino Biological, Enzo Life Sciences, Abcam, ProSpec, Uscn, Thermo Fisher Scientific, Gene Editing from DNA2.0, Clones from EMD Millipore, OriGene, GenScript, Sino Biological, DNA2.0, SwitchGear Genomics, Vector BioLabs, Cell lines from GenScript and LifeMap BioReagents, PCR Arrays from SABiosciences, Drugs and/or compounds from EMD Millipore, Tocris Bioscience, and/or Enzo Life Sciences),
    In Situ Hybridization Assays from
    Advanced Cell Diagnostics
    About This Section

     
     EMD Millipore Custom Antibody & Bulk Services
     EMD Millipore Preclinical / Clinical Development Services
     EMD Millipore Immunoassay Services
     EMD Millipore Target Screening & Profiling Services

      
     Browse Antibodies   Browse Cell Culture Products  
     Browse ELISAs   Browse Flow Cytometry Kits  
     Browse Primer Pairs   Browse Kinase Activity Assays/Reagents  
     Browse ELISpot Kits/Development Modules   Browse TFB/Immunoprecipitation Assays  
     Browse Apoptosis Detection Kits/Reagents   Browse Ubiquitin Proteasome Pathway (UPP) Assay Kits/Reagents  
     Browse DNA Damage/Repair Kits/Reagents   Browse Multiplex/Array Assay Kits/Reagents  
     Browse Cell Selection/Detection Kits/Reagents   Browse Secondary Antibodies/Controls/Staining Reagents  
     Browse Phosphatase Activity Assays/Reagents   Browse Recombinant/Natural Proteins  
     OriGene Antibodies for XPO5   OriGene shRNA RFP for XPO5  
     OriGene 29mer shRNA kits in GFP-retroviral vector in human, mouse, rat for XPO5   OriGene genome-wide validated SYBR primer pairs in human, mouse, rat for XPO5  
     Browse OriGene Protein Over-expression Lysates   Browse OriGene Fluorogenic Cell Assay Kits  
     OriGene siRNA for XPO5   OriGene 3'-UTR Clone for XPO5  
     OriGene untagged cDNA clones in CMV expression vector in human, mouse, rat for XPO5   OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human, mouse, rat for XPO5  
     Browse OriGene GFP tagged cDNA clones in CMV expression vector   Browse OriGene MicroRNA Expression Plasmids  
     Browse OriGene basic RS shRNAs   Browse OriGene validated miRNA SYBR primer pairs  
     Browse OriGene full length recombinant human proteins expressed in human HEK293 cells   OriGene custom cloning services - gene synthesis, subcloning, mutagenesis, variant library, vector shuttling  
     OriGene Custom Antibody Services for XPO5   OriGene Custom Protein Services for XPO5  
     OriGene Custom Immunoassay Development  

     
     
     QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat XPO5
     QIAGEN SeqTarget long-range PCR primers in human, mouse, rat for resequencing XPO5
     QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human, mouse, rat XPO5
     QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human, mouse, rat XPO5
     QIAGEN QuantiFast Probe-based Assays in human, mouse, rat XPO5
     QIAGEN QuantiTect SYBR Green Assays in human, mouse, rat XPO5
     GenScript Custom Purified and Recombinant Proteins Services for XPO5 GenScript cDNA clones with any tag delivered in your preferred vector for XPO5
     GenScript Custom Assay Services for XPO5 GenScript Custom Superior Antibodies Services for XPO5
     GenScript Custom overexpressing Cell Line Services for XPO5 CloneReady with Over 120,000 Genes
     Gene Synthesis: Any Gene in Any Vector Vector-based siRNA and miRNA, Ready for Transfection
     Gene Mutant Library, Variants up to 10^11 Plasmid Preparation
     Custom Peptide Services
     Antibodies & Assays for XPO5 
    (exportin 5)

     Regulatory tfbs in XPO5 promoter
     Search Chromatin IP Primers for XPO5
     RT2 qPCR Primer Assay in human, mouse, rat XPO5
     GNC Network for XPO5
     SABiosciences Custom PCR Arrays for XPO5
     Search Tocris compounds for XPO5
     Browse Sino Biological Proteins and Antibodies
     Browse Sino Biological cDNA Clones
     Antibodies/Proteins Production Services
     Rabbit Monoclonal Antibody Platform
     Bulk Purchasing
     Search www.enzolifesciences.com for proteins, assays, substrates, inhibitors & antibodies
     Novus Tissue Slides
     XPO5 antibodies
     XPO5 proteins
     XPO5 lysates
     Antibodies for XPO5
     See all of Abcam's Antibodies, Kits and Proteins for XPO5
     Custom Antibody / Protein Production Service
     Bulk Purchasing
     Advantages of Rabbit Monoclonal antibodies
     Abcam protocols and scientific support
     Browse ProSpec Recombinant Proteins




     XPO5 Proteins, Antibodies, CLIAs, and ELISAs
     Search LifeMap BioReagents cell lines for XPO5
     Gene Synthesis
     Protein Engineering
     Variant Library Synthesis
     Codon Optimization
     Protein Production and Purification
     Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for XPO5
     SwitchGear 3'UTR luciferase reporter plasmids for XPO5
     SwitchGear Promoter luciferase reporter plasmids for XPO5
     Search ThermoFisher Antibodies for XPO5
     Vector BioLabs ready-to-use adenovirus/AAV for human, mouse, rat XPO5
           
    GeneCards Homepage - Last full update: 19 Mar 2013 - Incrementals: 21 Mar 2013 , 15 Apr 2013 , 26 Apr 2013

    View Random Gene

    Category
    VWF
    (GIFTS: 73)
    von Willebrand factor
    GIFtS Group
    The GeneCards human gene database gene index: 1 3 5 6 A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 


    Developed at the Crown Human Genome Center, Department of Molecular Genetics, the Weizmann Institute of Science

    Hot genes      Disease genes      XPO5 gene at Home site.
    hostname: 356977-web1.xennexinc.com index build: 100 solr: 1.4