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Aliases for XKRY Gene

Aliases for XKRY Gene

  • XK, Kell Blood Group Complex Subunit-Related, Y-Linked 2 3
  • X Kell Blood Group Precursor-Related, Y-Linked 2 3
  • XKRY1 3 4
  • Testis-Specific XK-Related Protein On Y 3

External Ids for XKRY Gene

Previous GeneCards Identifiers for XKRY Gene

  • GC0YP019502
  • GC0YM019127
  • GC0YM018826
  • GC0YU900246
  • GC0YM018390
  • GC0YM019880

Summaries for XKRY Gene

Entrez Gene Summary for XKRY Gene

  • This gene is located in the nonrecombining portion of the Y chromosome, and is expressed specifically in testis. It encodes a protein which is similar to XK (X-linked Kell blood group precursor), a putative membrane transport protein. This gene is present as two identical copies within a palindromic region; this record represents the more centromeric copy. [provided by RefSeq, Jul 2008]

GeneCards Summary for XKRY Gene

XKRY (XK, Kell Blood Group Complex Subunit-Related, Y-Linked) is a Protein Coding gene. Diseases associated with XKRY include y chromosome infertility. An important paralog of this gene is XKRY2.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for XKRY Gene

Genomics for XKRY Gene

Regulatory Elements for XKRY Gene

Genomic Location for XKRY Gene

Chromosome:
Y
Start:
17,768,980 bp from pter
End:
17,777,400 bp from pter
Size:
8,421 bases
Orientation:
Minus strand

Genomic View for XKRY Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
GeneLoc Logo Gene Density

RefSeq DNA sequence for XKRY Gene

Proteins for XKRY Gene

  • Protein details for XKRY Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    O14609-XKRY_HUMAN
    Recommended name:
    Testis-specific XK-related protein, Y-linked
    Protein Accession:
    O14609

    Protein attributes for XKRY Gene

    Size:
    159 amino acids
    Molecular mass:
    18083 Da
    Quaternary structure:
    No Data Available

neXtProt entry for XKRY Gene

Proteomics data for XKRY Gene at MOPED

Post-translational modifications for XKRY Gene

No Post-translational modifications

Other Protein References for XKRY Gene

REFSEQ proteins:

No data available for DME Specific Peptides for XKRY Gene

Domains & Families for XKRY Gene

Protein Domains for XKRY Gene

ProtoNet:

Suggested Antigen Peptide Sequences for XKRY Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

O14609

UniProtKB/Swiss-Prot:

XKRY_HUMAN :
  • Belongs to the XK family.
Family:
  • Belongs to the XK family.
genes like me logo Genes that share domains with XKRY: view

Function for XKRY Gene

Animal Model Products

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for XKRY

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for XKRY Gene

Localization for XKRY Gene

Subcellular locations from UniProtKB/Swiss-Prot for XKRY Gene

Membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for XKRY Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with XKRY: view

No data available for Subcellular locations from COMPARTMENTS for XKRY Gene

Pathways & Interactions for XKRY Gene

SuperPathways for XKRY Gene

No Data Available

Interacting Proteins for XKRY Gene

Selected Interacting proteins: O14609-XKRY_HUMAN for XKRY Gene via I2D

Symbol External ID(s) Details
CSNK2A1

Gene Ontology (GO) - Biological Process for XKRY Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007338 single fertilization TAS 9381176
genes like me logo Genes that share ontologies with XKRY: view

No data available for Pathways by source and SIGNOR curated interactions for XKRY Gene

Drugs & Compounds for XKRY Gene

No Compound Related Data Available

Transcripts for XKRY Gene

mRNA/cDNA for XKRY Gene

(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for XKRY

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for XKRY Gene

No ASD Table

Relevant External Links for XKRY Gene

GeneLoc Exon Structure for
XKRY
ECgene alternative splicing isoforms for
XKRY

Expression for XKRY Gene

mRNA expression in normal human tissues for XKRY Gene

SOURCE GeneReport for Unigene cluster for XKRY Gene Hs.158346

mRNA Expression by UniProt/SwissProt for XKRY Gene

O14609-XKRY_HUMAN
Tissue specificity: Testis specific
genes like me logo Genes that share expression patterns with XKRY: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for XKRY Gene

Orthologs for XKRY Gene

Evolution for XKRY Gene

ENSEMBL:
Gene Tree for XKRY (if available)
TreeFam:
Gene Tree for XKRY (if available)

No data available for Orthologs for XKRY Gene

Paralogs for XKRY Gene

Paralogs for XKRY Gene

(3) SIMAP similar genes for XKRY Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with XKRY: view

Variants for XKRY Gene

Structural Variations from Database of Genomic Variants (DGV) for XKRY Gene

Variant ID Type Subtype PubMed ID
esv1670141 OTHER Inversion 17803354
nsv469717 CNV Complex 16826518

Relevant External Links for XKRY Gene

HapMap Linkage Disequilibrium report
XKRY

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar and Variation tolerance for XKRY Gene

Disorders for XKRY Gene

MalaCards: The human disease database

(1) MalaCards diseases for XKRY Gene - From: GeneCards

Disorder Aliases PubMed IDs
y chromosome infertility
  • oligozoospermia
- elite association
Search XKRY in MalaCards View complete list of genes associated with diseases

Relevant External Links for XKRY

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
XKRY
genes like me logo Genes that share disorders with XKRY: view

No data available for UniProtKB/Swiss-Prot and Genatlas for XKRY Gene

Publications for XKRY Gene

  1. Functional coherence of the human Y chromosome. (PMID: 9381176) Lahn B.T. … Page D.C. (Science 1997) 2 67
  2. The male-specific region of the human Y chromosome is a mosaic of discrete sequence classes. (PMID: 12815422) Skaletsky H. … Page D.C. (Nature 2003) 67
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 67
  4. Kell and Kx, two disulfide-linked proteins of the human erythrocyte membrane are phosphorylated in vivo. (PMID: 9647734) Carbonnet F. … Bertrand O. (Biochem. Biophys. Res. Commun. 1998) 67
  5. Y Chromosome Infertility (PMID: 20301513) Pagon R.A. … Stephens K. ( 1993) 67

Products for XKRY Gene

Sources for XKRY Gene

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