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Aliases for XGY2 Gene

Aliases for XGY2 Gene

  • Xg Pseudogene, Y-Linked 2 2 3
  • Xg Blood Group Pseudogene 3
  • XGPY2 3
  • XGPY 3
  • XG 3

External Ids for XGY2 Gene

Previous HGNC Symbols for XGY2 Gene

  • XGPY2

Summaries for XGY2 Gene

GeneCards Summary for XGY2 Gene

XGY2 (Xg Pseudogene, Y-Linked 2) is a Pseudogene.

Additional gene information for XGY2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for XGY2 Gene

Genomics for XGY2 Gene

Regulatory Elements for XGY2 Gene

Enhancers for XGY2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0YH002781 0.4 ENCODE 0.3 +29.7 29653 1 HLF RNU6-1334P XGY2
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around XGY2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for XGY2 Gene

Genomic Locations for XGY2 Gene
22,701 bases
Plus strand

Genomic View for XGY2 Gene

Genes around XGY2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
XGY2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for XGY2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for XGY2 Gene

Function for XGY2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for XGY2 Gene

Localization for XGY2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for XGY2 Gene

Pathways & Interactions for XGY2 Gene

No Data Available

Interacting Proteins for XGY2 Gene

Gene Ontology (GO) - Biological Process for XGY2 Gene


No data available for Pathways by source and SIGNOR curated interactions for XGY2 Gene

Drugs & Compounds for XGY2 Gene

No Compound Related Data Available

Transcripts for XGY2 Gene

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for XGY2 Gene

No ASD Table

Relevant External Links for XGY2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for XGY2 Gene

Expression for XGY2 Gene

NURSA nuclear receptor signaling pathways regulating expression of XGY2 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for XGY2 Gene

Orthologs for XGY2 Gene

No data available for Orthologs and Evolution for XGY2 Gene

Paralogs for XGY2 Gene

No data available for Paralogs for XGY2 Gene

Variants for XGY2 Gene

Sequence variations from dbSNP and Humsavar for XGY2 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs1000481837 -- 2,754,149(+) ACTGG(A/C)GTGCG intron-variant
rs1000515877 -- 2,759,056(+) TCTAT(C/T)AATCT intron-variant
rs1000572700 -- 2,764,956(+) GAAGC(A/G)CTCGA intron-variant
rs1000579569 -- 2,759,511(+) CCCCA(C/T)AGGGC intron-variant
rs1000763021 -- 2,753,970(+) CTAGA(G/T)GATTT intron-variant

Structural Variations from Database of Genomic Variants (DGV) for XGY2 Gene

Variant ID Type Subtype PubMed ID
nsv1150439 CNV duplication 26484159
nsv1125076 CNV duplication 24896259
esv34985 CNV gain 17911159
esv3431582 CNV insertion 20981092
esv29996 CNV loss 17803354
esv29994 CNV gain 17803354
esv2758855 CNV gain 17122850
esv2752318 CNV gain 17911159
esv2739882 CNV deletion 23290073
esv2739881 CNV deletion 23290073

Relevant External Links for XGY2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for XGY2 Gene

Disorders for XGY2 Gene

Relevant External Links for XGY2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for XGY2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for XGY2 Gene

Publications for XGY2 Gene

  1. The human Y chromosome homologue of XG: transcription of a naturally truncated gene. (PMID: 7633446) Weller PA … Ellis NA (Human molecular genetics 1995) 3 60
  2. Cloning of PBDX, an MIC2-related gene that spans the pseudoautosomal boundary on chromosome Xp. (PMID: 8054981) Ellis NA … Weller P (Nature genetics 1994) 3 60

Products for XGY2 Gene

Sources for XGY2 Gene

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