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Aliases for XGY2 Gene

Aliases for XGY2 Gene

  • Xg Pseudogene, Y-Linked 2 2 3
  • Xg Blood Group Pseudogene 3
  • XGPY2 3
  • XGPY 3
  • XG 3

External Ids for XGY2 Gene

Previous HGNC Symbols for XGY2 Gene

  • XGPY2

Summaries for XGY2 Gene

GeneCards Summary for XGY2 Gene

XGY2 (Xg Pseudogene, Y-Linked 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for XGY2 Gene

Genomics for XGY2 Gene

Regulatory Elements for XGY2 Gene

Enhancers for XGY2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0YF002781 0.4 ENCODE 0.3 +29.7 29653 1.0 HLF RNU6-1334P XGY2
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around XGY2 on UCSC Golden Path with GeneCards custom track

Genomic Location for XGY2 Gene

2,752,296 bp from pter
2,774,996 bp from pter
22,701 bases
Plus strand

Genomic View for XGY2 Gene

Genes around XGY2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
XGY2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for XGY2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for XGY2 Gene

Proteins for XGY2 Gene

Post-translational modifications for XGY2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for XGY2 Gene

Domains & Families for XGY2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for XGY2 Gene

Function for XGY2 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for XGY2 Gene

Localization for XGY2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for XGY2 Gene

Pathways & Interactions for XGY2 Gene

SuperPathways for XGY2 Gene

No Data Available

Interacting Proteins for XGY2 Gene

Gene Ontology (GO) - Biological Process for XGY2 Gene


No data available for Pathways by source and SIGNOR curated interactions for XGY2 Gene

Transcripts for XGY2 Gene

Alternative Splicing Database (ASD) splice patterns (SP) for XGY2 Gene

No ASD Table

Relevant External Links for XGY2 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

No data available for mRNA/cDNA for XGY2 Gene

Expression for XGY2 Gene

NURSA nuclear receptor signaling pathways regulating expression of XGY2 Gene:

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for XGY2 Gene

Orthologs for XGY2 Gene

No data available for Orthologs and Evolution for XGY2 Gene

Paralogs for XGY2 Gene

No data available for Paralogs for XGY2 Gene

Variants for XGY2 Gene

Sequence variations from dbSNP and Humsavar for XGY2 Gene

SNP ID Clin Chr 0Y pos Sequence Context AA Info Type
rs10589360 -- 2,759,049(+) CCATC(-/CGTC)TATCA intron-variant
rs10628814 -- 2,751,622(+) CACAT(-/GTC)ATCTC upstream-variant-2KB
rs10660578 -- 2,758,956(+) CTATT(-/TATC)TATCT intron-variant
rs10675309 -- 2,758,965(+) TATCT(-/ATCT)TTCTA intron-variant
rs111249408 -- 2,773,825(+) AGAGA(A/G)GGAAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for XGY2 Gene

Variant ID Type Subtype PubMed ID
esv2739881 CNV deletion 23290073
esv2739882 CNV deletion 23290073
esv2752318 CNV gain 17911159
esv2758855 CNV gain 17122850
esv29994 CNV gain 17803354
esv29996 CNV loss 17803354
esv3431582 CNV insertion 20981092
esv34985 CNV gain 17911159
nsv1125076 CNV duplication 24896259
nsv1150439 CNV duplication 26484159

Relevant External Links for XGY2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for XGY2 Gene

Disorders for XGY2 Gene

Relevant External Links for XGY2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:

No disorders were found for XGY2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for XGY2 Gene

Publications for XGY2 Gene

  1. The human Y chromosome homologue of XG: transcription of a naturally truncated gene. (PMID: 7633446) Weller P.A. … Ellis N.A. (Hum. Mol. Genet. 1995) 3 64
  2. Cloning of PBDX, an MIC2-related gene that spans the pseudoautosomal boundary on chromosome Xp. (PMID: 8054981) Ellis N.A. … Weller P. (Nat. Genet. 1994) 3 64

Products for XGY2 Gene

Sources for XGY2 Gene

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