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Aliases for XAGE-4 Gene

Aliases for XAGE-4 Gene

  • XAGE-4 Protein 3
  • AL159987.1 5

External Ids for XAGE-4 Gene

Previous GeneCards Identifiers for XAGE-4 Gene

  • GC0XM052633
  • GC0XM053591
  • GC0XM054258
  • GC0XU900392
  • GC0XM055653
  • GC0XM052732

Summaries for XAGE-4 Gene

GeneCards Summary for XAGE-4 Gene

XAGE-4 (XAGE-4 Protein) is a Pseudogene.

Additional gene information for XAGE-4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for XAGE-4 Gene

Genomics for XAGE-4 Gene

Regulatory Elements for XAGE-4 Gene

Enhancers for XAGE-4 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XH054920 0.7 ENCODE 14.6 +736.3 736339 2.1 PKNOX1 MXI1 KLF1 ZNF473 ZNF366 POLR2A PATZ1 PRDM10 ZBTB20 SP3 TRO LOC100421746 PAGE3 XAGE-4 ENSG00000229594 FOXR2 RPL7AP71 PIR52570
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around XAGE-4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for XAGE-4 Gene

Genomic Locations for XAGE-4 Gene
chrX:55,654,692-55,657,961
(GRCh38/hg38)
Size:
3,270 bases
Orientation:
Minus strand
chrX:55,653,184-55,683,447
(GRCh37/hg19)

Genomic View for XAGE-4 Gene

Genes around XAGE-4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
XAGE-4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for XAGE-4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for XAGE-4 Gene

Proteins for XAGE-4 Gene

  • Protein details for XAGE-4 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    Q8WWM0
    Recommended name:
    XAGE-4 protein
    Protein Accession:
    Q8WWM0

    Protein attributes for XAGE-4 Gene

    Size:
    69 amino acids
    Molecular mass:
    7621 Da
    Quaternary structure:
    No Data Available

neXtProt entry for XAGE-4 Gene

Post-translational modifications for XAGE-4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for XAGE-4 Gene

Domains & Families for XAGE-4 Gene

Protein Domains for XAGE-4 Gene

InterPro:
Blocks:
ProtoNet:

Suggested Antigen Peptide Sequences for XAGE-4 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with XAGE-4: view

No data available for Gene Families and UniProtKB/Swiss-Prot for XAGE-4 Gene

Function for XAGE-4 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for XAGE-4 Gene

Localization for XAGE-4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for XAGE-4 Gene

Pathways & Interactions for XAGE-4 Gene

SuperPathways for XAGE-4 Gene

No Data Available

Interacting Proteins for XAGE-4 Gene

Gene Ontology (GO) - Biological Process for XAGE-4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for XAGE-4 Gene

Drugs & Compounds for XAGE-4 Gene

No Compound Related Data Available

Transcripts for XAGE-4 Gene

mRNA/cDNA for XAGE-4 Gene

(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for XAGE-4 Gene

No ASD Table

Relevant External Links for XAGE-4 Gene

GeneLoc Exon Structure for
XAGE-4

Expression for XAGE-4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for XAGE-4 Gene

SOURCE GeneReport for Unigene cluster for XAGE-4 Gene:

Hs.381355
genes like me logo Genes that share expression patterns with XAGE-4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for XAGE-4 Gene

Orthologs for XAGE-4 Gene

Evolution for XAGE-4 Gene

ENSEMBL:
Gene Tree for XAGE-4 (if available)
TreeFam:
Gene Tree for XAGE-4 (if available)

No data available for Orthologs for XAGE-4 Gene

Paralogs for XAGE-4 Gene

(6) SIMAP similar genes for XAGE-4 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with XAGE-4: view

No data available for Paralogs for XAGE-4 Gene

Variants for XAGE-4 Gene

Sequence variations from dbSNP and Humsavar for XAGE-4 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs1003678404 -- 55,656,998(+) TTGAT(C/G)TTACT nc-transcript-variant
rs1005219956 -- 55,658,851(+) AGACC(A/G)AGGAA upstream-variant-2KB
rs1005376054 -- 55,657,168(+) TGTGT(A/G)CCTTC upstream-variant-2KB
rs1005569006 -- 55,657,628(+) GACTC(A/G)GATAC upstream-variant-2KB
rs1008835893 -- 55,655,653(+) AATAC(A/C)GAGCA intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for XAGE-4 Gene

Disorders for XAGE-4 Gene

Relevant External Links for XAGE-4

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
XAGE-4

No disorders were found for XAGE-4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for XAGE-4 Gene

Publications for XAGE-4 Gene

  1. Genome-wide association study of smoking behaviours among Bangladeshi adults. (PMID: 24665060) Argos M … Ahsan H (Journal of medical genetics 2014) 3 60
  2. The XAGE family of cancer/testis-associated genes: alignment and expression profile in normal tissues, melanoma lesions and Ewing's sarcoma. (PMID: 11992404) Zendman AJ … Van Muijen GN (International journal of cancer 2002) 3 60

Products for XAGE-4 Gene

Sources for XAGE-4 Gene

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