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Aliases for WWTR1-IT1 Gene

Subcategory (RNA class) for WWTR1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for WWTR1-IT1 Gene

  • WWTR1 Intronic Transcript 1 2 3 5
  • WWTR1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for WWTR1-IT1 Gene

Previous GeneCards Identifiers for WWTR1-IT1 Gene

  • GC00U933875
  • GC03M149369

Summaries for WWTR1-IT1 Gene

GeneCards Summary for WWTR1-IT1 Gene

WWTR1-IT1 (WWTR1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for WWTR1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WWTR1-IT1 Gene

Genomics for WWTR1-IT1 Gene

GeneHancer (GH) Regulatory Elements for WWTR1-IT1 Gene

Promoters and enhancers for WWTR1-IT1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH03I149648 Enhancer 0.8 Ensembl ENCODE dbSUPER 550.8 +1.3 1290 1.6 IKZF1 MAFK ZKSCAN1 WWTR1-IT1 COMMD2 RNU6-1098P WWTR1 GC03P149613
GH03I149649 Enhancer 0.4 dbSUPER 550.8 -0.8 -782 2.2 SCRT1 SCRT2 WWTR1-IT1 COMMD2 RNU6-1098P WWTR1 WWTR1-AS1
GH03I150406 Promoter/Enhancer 2.3 EPDnew Ensembl ENCODE dbSUPER 10.6 -761.1 -761144 9.6 DMAP1 YY1 SLC30A9 ZNF213 ZNF143 SP3 ZNF610 GLIS1 NBN NR2C1 GC03M150408 TSC22D2 WWTR1 COMMD2 WWTR1-IT1 EIF2A NPM1P29 GC03P150463
GH03I149652 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 0.4 -6.6 -6611 7.8 FOXA2 SMAD1 ARID4B SIN3A DMAP1 ZBTB7B YY1 ZNF213 ZNF143 SP3 WWTR1-AS1 WWTR1 COMMD2 WWTR1-IT1
GH03I149646 Enhancer 0.9 ENCODE dbSUPER 0.8 +3.7 3684 0.6 MEIS2 KLF1 PKNOX1 ZNF449 TEAD4 TAL1 JUN FOSL1 TCF12 NCOR1 COMMD2 RNU6-1098P WWTR1 WWTR1-IT1 GC03P149613
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around WWTR1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for WWTR1-IT1 Gene

Genomic Locations for WWTR1-IT1 Gene
chr3:149,648,997-149,650,184
(GRCh38/hg38)
Size:
1,188 bases
Orientation:
Minus strand
chr3:149,366,784-149,367,971
(GRCh37/hg19)

Genomic View for WWTR1-IT1 Gene

Genes around WWTR1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WWTR1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WWTR1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for WWTR1-IT1 Gene

Proteins for WWTR1-IT1 Gene

Post-translational modifications for WWTR1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WWTR1-IT1 Gene

Domains & Families for WWTR1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WWTR1-IT1 Gene

Function for WWTR1-IT1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WWTR1-IT1 Gene

Localization for WWTR1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WWTR1-IT1 Gene

Pathways & Interactions for WWTR1-IT1 Gene

SuperPathways for WWTR1-IT1 Gene

No Data Available

Interacting Proteins for WWTR1-IT1 Gene

Gene Ontology (GO) - Biological Process for WWTR1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WWTR1-IT1 Gene

Drugs & Compounds for WWTR1-IT1 Gene

No Compound Related Data Available

Transcripts for WWTR1-IT1 Gene

mRNA/cDNA for WWTR1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for WWTR1-IT1 Gene

No ASD Table

Relevant External Links for WWTR1-IT1 Gene

GeneLoc Exon Structure for
WWTR1-IT1
ECgene alternative splicing isoforms for
WWTR1-IT1

Expression for WWTR1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WWTR1-IT1 Gene

genes like me logo Genes that share expression patterns with WWTR1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WWTR1-IT1 Gene

Orthologs for WWTR1-IT1 Gene

Evolution for WWTR1-IT1 Gene

ENSEMBL:
Gene Tree for WWTR1-IT1 (if available)
TreeFam:
Gene Tree for WWTR1-IT1 (if available)

No data available for Orthologs for WWTR1-IT1 Gene

Paralogs for WWTR1-IT1 Gene

No data available for Paralogs for WWTR1-IT1 Gene

Variants for WWTR1-IT1 Gene

Additional Variant Information for WWTR1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WWTR1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WWTR1-IT1 Gene

Disorders for WWTR1-IT1 Gene

No disorders were found for WWTR1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for WWTR1-IT1 Gene

Publications for WWTR1-IT1 Gene

No publications were found for WWTR1-IT1 Gene.

Products for WWTR1-IT1 Gene

Sources for WWTR1-IT1 Gene

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