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Aliases for WWTR1-IT1 Gene

Subcategory (RNA class) for WWTR1-IT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for WWTR1-IT1 Gene

  • WWTR1 Intronic Transcript 1 2 3 5
  • WWTR1 Intronic Transcript 1 (Non-Protein Coding) 2

External Ids for WWTR1-IT1 Gene

Previous GeneCards Identifiers for WWTR1-IT1 Gene

  • GC00U933875
  • GC03M149369

Summaries for WWTR1-IT1 Gene

GeneCards Summary for WWTR1-IT1 Gene

WWTR1-IT1 (WWTR1 Intronic Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for WWTR1-IT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WWTR1-IT1 Gene

Genomics for WWTR1-IT1 Gene

Regulatory Elements for WWTR1-IT1 Gene

Enhancers for WWTR1-IT1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03H150406 1.4 ENCODE dbSUPER 10.6 -761.1 -761145 9 HDGF PKNOX1 FOXA2 ARNT ARID4B SIN3A DMAP1 ZNF2 YY1 SLC30A9 COMMD2 RPL32P9 LOC730021 ENSG00000241929 WWTR1 WWTR1-IT1 EIF2A NPM1P29 GC03M150408 GC03P150463
GH03H149652 1.1 ENCODE dbSUPER 0.7 -3.8 -3771 2 SOX13 SAP130 CEBPG RARA TEAD3 LCORL ZSCAN5C ATF7 NR2F6 RUNX3 COMMD2 WWTR1 WWTR1-AS1 WWTR1-IT1
GH03H149648 1 Ensembl ENCODE dbSUPER 0.7 +1.3 1291 1 IKZF1 MAFK ZKSCAN1 COMMD2 RNU6-1098P WWTR1 WWTR1-IT1 GC03P149613
GH03H149646 1 ENCODE dbSUPER 0.7 +3.7 3684 0 PKNOX1 KLF1 TAL1 JUN FOSL1 TCF12 NCOR1 FOSL2 FOS SMARCE1 COMMD2 RNU6-1098P WWTR1 WWTR1-IT1 GC03P149613
GH03H149613 1.7 FANTOM5 Ensembl ENCODE dbSUPER 0.3 +32.0 31991 8 ELF3 FOXA2 FEZF1 RARA YY1 TCF12 GTF3C2 ZNF366 SCRT2 FOS WWTR1 WWTR1-AS1 EIF2A COMMD2 TM4SF18 TM4SF1 GC03P149613 WWTR1-IT1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around WWTR1-IT1 on UCSC Golden Path with GeneCards custom track

Genomic Location for WWTR1-IT1 Gene

Chromosome:
3
Start:
149,648,997 bp from pter
End:
149,650,184 bp from pter
Size:
1,188 bases
Orientation:
Minus strand

Genomic View for WWTR1-IT1 Gene

Genes around WWTR1-IT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WWTR1-IT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WWTR1-IT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for WWTR1-IT1 Gene

Proteins for WWTR1-IT1 Gene

Post-translational modifications for WWTR1-IT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WWTR1-IT1 Gene

Domains & Families for WWTR1-IT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WWTR1-IT1 Gene

Function for WWTR1-IT1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for WWTR1-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WWTR1-IT1 Gene

Localization for WWTR1-IT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WWTR1-IT1 Gene

Pathways & Interactions for WWTR1-IT1 Gene

SuperPathways for WWTR1-IT1 Gene

No Data Available

Interacting Proteins for WWTR1-IT1 Gene

Gene Ontology (GO) - Biological Process for WWTR1-IT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WWTR1-IT1 Gene

Drugs & Compounds for WWTR1-IT1 Gene

No Compound Related Data Available

Transcripts for WWTR1-IT1 Gene

mRNA/cDNA for WWTR1-IT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for WWTR1-IT1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for WWTR1-IT1 Gene

No ASD Table

Relevant External Links for WWTR1-IT1 Gene

GeneLoc Exon Structure for
WWTR1-IT1
ECgene alternative splicing isoforms for
WWTR1-IT1

Expression for WWTR1-IT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WWTR1-IT1 Gene

genes like me logo Genes that share expression patterns with WWTR1-IT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WWTR1-IT1 Gene

Orthologs for WWTR1-IT1 Gene

Evolution for WWTR1-IT1 Gene

ENSEMBL:
Gene Tree for WWTR1-IT1 (if available)
TreeFam:
Gene Tree for WWTR1-IT1 (if available)

No data available for Orthologs for WWTR1-IT1 Gene

Paralogs for WWTR1-IT1 Gene

No data available for Paralogs for WWTR1-IT1 Gene

Variants for WWTR1-IT1 Gene

Relevant External Links for WWTR1-IT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WWTR1-IT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WWTR1-IT1 Gene

Disorders for WWTR1-IT1 Gene

No disorders were found for WWTR1-IT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for WWTR1-IT1 Gene

Publications for WWTR1-IT1 Gene

No publications were found for WWTR1-IT1 Gene.

Products for WWTR1-IT1 Gene

Sources for WWTR1-IT1 Gene

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