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Aliases for WWC3 Gene

Aliases for WWC3 Gene

  • WWC Family Member 3 2 3 5
  • Protein WWC3 3
  • KIAA1280 4
  • BM042 3

External Ids for WWC3 Gene

Previous GeneCards Identifiers for WWC3 Gene

  • GC0XP009943
  • GC0XP007861

Summaries for WWC3 Gene

Entrez Gene Summary for WWC3 Gene

  • This gene encodes a member of the WWC family of proteins, which also includes the WWC1 (KIBRA) gene product and the WWC2 gene product. The protein encoded by this gene includes a C2 domain, which is known to mediate homodimerization in the related WWC1 gene product. [provided by RefSeq, Sep 2011]

GeneCards Summary for WWC3 Gene

WWC3 (WWC Family Member 3) is a Protein Coding gene. GO annotations related to this gene include kinase binding and protein complex scaffold. An important paralog of this gene is WWC2.

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WWC3 Gene

Genomics for WWC3 Gene

Regulatory Elements for WWC3 Gene

Enhancers for WWC3 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH0XG010097 1.5 Ensembl ENCODE dbSUPER 13.4 +85.3 85317 6.2 PKNOX1 FOXA2 MLX ARID4B FOS NFYC JUNB PPARG TBX21 KAT8 WWC3 ENSG00000202469 CLCN4
GH0XG010046 1.4 Ensembl ENCODE dbSUPER 12.6 +33.3 33340 4.3 HDGF ARID4B SIN3A NFXL1 TCF12 EGR1 RELB IKZF2 THAP11 ZNF263 WWC3 WWC3-AS1 GC0XP010062
GH0XG010082 1.3 Ensembl ENCODE dbSUPER 13.1 +67.9 67924 2.6 PKNOX1 WRNIP1 SIN3A RAD21 ZBTB40 RELB ETV6 IKZF2 CREM JUNB WWC3 ENSG00000202469 CLCN4
GH0XG010042 1.3 Ensembl ENCODE dbSUPER 12.6 +29.1 29081 3.4 ELF3 HDGF PKNOX1 FOXA2 BMI1 GATA2 ZNF143 ZNF207 ETV6 RELB WWC3 WWC3-AS1 GC0XP010062
GH0XG009980 1.2 FANTOM5 Ensembl ENCODE 12.6 -34.1 -34106 2.2 HDGF SOX13 PKNOX1 RELB IKZF2 CHD2 SOX5 TFE3 MTA2 NR2F1 WWC3 CLDN34
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around WWC3 on UCSC Golden Path with GeneCards custom track

Promoters for WWC3 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000244264 138 3001 CTCF SAP130 TAF1 BACH1 MAX SIN3A NFXL1 ZNF48 E2F1 EGR1

Transcription factor binding sites by QIAGEN in the WWC3 gene promoter:

Genomic Location for WWC3 Gene

Chromosome:
X
Start:
10,015,562 bp from pter
End:
10,144,478 bp from pter
Size:
128,917 bases
Orientation:
Plus strand

Genomic View for WWC3 Gene

Genes around WWC3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WWC3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WWC3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WWC3 Gene

Proteins for WWC3 Gene

  • Protein details for WWC3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9ULE0-WWC3_HUMAN
    Recommended name:
    Protein WWC3
    Protein Accession:
    Q9ULE0
    Secondary Accessions:
    • A8KA96
    • Q659C1
    • Q9BTQ1

    Protein attributes for WWC3 Gene

    Size:
    1092 amino acids
    Molecular mass:
    122676 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for WWC3 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for WWC3 Gene

Post-translational modifications for WWC3 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for WWC3 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for WWC3 Gene

Domains & Families for WWC3 Gene

Protein Domains for WWC3 Gene

InterPro:
ProtoNet:

Suggested Antigen Peptide Sequences for WWC3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9ULE0

UniProtKB/Swiss-Prot:

WWC3_HUMAN :
  • Belongs to the WWC family.
Family:
  • Belongs to the WWC family.
genes like me logo Genes that share domains with WWC3: view

No data available for Gene Families for WWC3 Gene

Function for WWC3 Gene

Gene Ontology (GO) - Molecular Function for WWC3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0019900 kinase binding IPI 24682284
GO:0032947 protein complex scaffold IDA 24682284
genes like me logo Genes that share ontologies with WWC3: view
genes like me logo Genes that share phenotypes with WWC3: view

Animal Model Products

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Animal Models , Transcription Factor Targets and HOMER Transcription for WWC3 Gene

Localization for WWC3 Gene

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for WWC3 gene
Compartment Confidence
cytosol 5
nucleus 3
cytoskeleton 2

Gene Ontology (GO) - Cellular Components for WWC3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005829 cytosol IDA 24682284
genes like me logo Genes that share ontologies with WWC3: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot for WWC3 Gene

Pathways & Interactions for WWC3 Gene

No Data Available

Gene Ontology (GO) - Biological Process for WWC3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0000122 negative regulation of transcription from RNA polymerase II promoter IDA 24682284
GO:0035331 negative regulation of hippo signaling IDA 24682284
GO:0046621 negative regulation of organ growth IMP 24682284
genes like me logo Genes that share ontologies with WWC3: view

No data available for Pathways by source and SIGNOR curated interactions for WWC3 Gene

Transcripts for WWC3 Gene

mRNA/cDNA for WWC3 Gene

Unigene Clusters for WWC3 Gene

WWC family member 3:
Representative Sequences:

CRISPR Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for WWC3 Gene

ExUns: 1a · 1b ^ 2 ^ 3 ^ 4a · 4b ^ 5 ^ 6 ^ 7a · 7b ^ 8 ^ 9a · 9b · 9c ^ 10a · 10b ^ 11 ^ 12a · 12b · 12c ^ 13 ^ 14 ^ 15 ^ 16 ^ 17a · 17b ·
SP1: - - - - -
SP2: - -
SP3: -
SP4: - -
SP5:
SP6: - -
SP7:
SP8:

ExUns: 17c ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ 25
SP1:
SP2:
SP3:
SP4:
SP5:
SP6:
SP7:
SP8:

Relevant External Links for WWC3 Gene

GeneLoc Exon Structure for
WWC3
ECgene alternative splicing isoforms for
WWC3

Expression for WWC3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WWC3 Gene

Protein differential expression in normal tissues from HIPED for WWC3 Gene

This gene is overexpressed in Liver (23.5), Plasma (23.3), and Placenta (12.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for WWC3 Gene



NURSA nuclear receptor signaling pathways regulating expression of WWC3 Gene:

WWC3

SOURCE GeneReport for Unigene cluster for WWC3 Gene:

Hs.527524

Evidence on tissue expression from TISSUES for WWC3 Gene

  • Nervous system(4.4)
  • Liver(4.1)
genes like me logo Genes that share expression patterns with WWC3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt and Phenotype-based relationships between genes and organs from Gene ORGANizer for WWC3 Gene

Orthologs for WWC3 Gene

This gene was present in the common ancestor of animals.

Orthologs for WWC3 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia WWC3 34 35
  • 97.43 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 95 (a)
OneToMany
-- 35
  • 82 (a)
OneToMany
-- 35
  • 76 (a)
OneToMany
-- 35
  • 76 (a)
OneToMany
dog
(Canis familiaris)
Mammalia WWC3 34 35
  • 84.88 (n)
cow
(Bos Taurus)
Mammalia WWC3 34 35
  • 82.89 (n)
rat
(Rattus norvegicus)
Mammalia Wwc3 34
  • 81.76 (n)
oppossum
(Monodelphis domestica)
Mammalia WWC3 35
  • 74 (a)
OneToOne
chicken
(Gallus gallus)
Aves WWC3 34 35
  • 73.74 (n)
lizard
(Anolis carolinensis)
Reptilia WWC3 35
  • 64 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia wwc3 34
  • 68.61 (n)
zebrafish
(Danio rerio)
Actinopterygii wwc3 34 35
  • 61.79 (n)
fruit fly
(Drosophila melanogaster)
Insecta kibra 35
  • 23 (a)
OneToMany
sea squirt
(Ciona savignyi)
Ascidiacea CSA.8937 35
  • 19 (a)
ManyToMany
CSA.5313 35
  • 13 (a)
ManyToMany
Species where no ortholog for WWC3 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • mouse (Mus musculus)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for WWC3 Gene

ENSEMBL:
Gene Tree for WWC3 (if available)
TreeFam:
Gene Tree for WWC3 (if available)

Paralogs for WWC3 Gene

Paralogs for WWC3 Gene

(2) SIMAP similar genes for WWC3 Gene using alignment to 3 proteins:

Pseudogenes.org Pseudogenes for WWC3 Gene

genes like me logo Genes that share paralogs with WWC3: view

Variants for WWC3 Gene

Sequence variations from dbSNP and Humsavar for WWC3 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type
rs193921110 Uncertain significance 10,126,289(+) CGCAG(A/C)TGCAG reference, missense
rs1000024781 -- 10,054,869(+) CATCC(A/C)TTCTC intron-variant
rs1000025550 -- 10,125,329(+) TGTGC(C/T)GTACA intron-variant
rs1000054512 -- 10,062,070(+) TTAAA(A/G)TAGGA intron-variant
rs1000130050 -- 10,053,473(+) CCATT(G/T)CTTCA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for WWC3 Gene

Variant ID Type Subtype PubMed ID
esv25793 CNV loss 19812545
esv2758861 CNV loss 17122850
nsv1075718 CNV deletion 25765185
nsv1133761 CNV deletion 24896259
nsv425073 CNV insertion 16902084
nsv425191 CNV deletion 16902084
nsv524562 CNV gain 19592680

Variation tolerance for WWC3 Gene

Residual Variation Intolerance Score: 88.5% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 2.93; 49.12% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for WWC3 Gene

Human Gene Mutation Database (HGMD)
WWC3
SNPedia medical, phenotypic, and genealogical associations of SNPs for
WWC3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for WWC3 Gene

Disorders for WWC3 Gene

Relevant External Links for WWC3

Genetic Association Database (GAD)
WWC3
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
WWC3

No disorders were found for WWC3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WWC3 Gene

Publications for WWC3 Gene

  1. Prediction of the coding sequences of unidentified human genes. XV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro. (PMID: 10574462) Nagase T. … Ohara O. (DNA Res. 1999) 2 3 4 64
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 3 4 64
  4. An enzyme assisted RP-RPLC approach for in-depth analysis of human liver phosphoproteome. (PMID: 24275569) Bian Y. … Zou H. (J. Proteomics 2014) 4 64
  5. Evolutionary and Molecular Facts Link the WWC Protein Family to Hippo Signaling. (PMID: 24682284) Wennmann D.O. … Kremerskothen J. (Mol. Biol. Evol. 2014) 3 64

Products for WWC3 Gene

Sources for WWC3 Gene

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