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Aliases for WWC2-AS2 Gene

Subcategory (RNA class) for WWC2-AS2 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for WWC2-AS2 Gene

  • WWC2 Antisense RNA 2 2 3 4 5
  • WWC2 Antisense RNA 2 (Non-Protein Coding) 2 3
  • C4orf38 3 4
  • Chromosome 4 Open Reading Frame 38 2
  • WWC2 Antisense Gene Protein 2 4

External Ids for WWC2-AS2 Gene

ORGUL Members for WWC2-AS2 Gene

Previous HGNC Symbols for WWC2-AS2 Gene

  • C4orf38

Previous GeneCards Identifiers for WWC2-AS2 Gene

  • GC04M184018

Summaries for WWC2-AS2 Gene

GeneCards Summary for WWC2-AS2 Gene

WWC2-AS2 (WWC2 Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class.

Additional gene information for WWC2-AS2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WWC2-AS2 Gene

Genomics for WWC2-AS2 Gene

GeneHancer (GH) Regulatory Elements for WWC2-AS2 Gene

Promoters and enhancers for WWC2-AS2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH04I183096 Promoter/Enhancer 2.2 EPDnew Ensembl ENCODE dbSUPER 558 +0.2 166 4.7 PKNOX1 FOXA2 MLX ARID4B SIN3A FEZF1 DMAP1 ZNF2 YY1 POLR2B WWC2-AS2 GC04P183097 WWC2
GH04I183073 Enhancer 0.9 Ensembl ENCODE 11.8 +24.7 24728 1.9 ELF3 MEIS2 CTCF MAX CEBPG ZNF2 RAD21 TEAD3 CC2D1A ARID2 WWC2 WWC2-AS2 LOC105377578 FAM92A1P2
GH04I183200 Enhancer 0.6 Ensembl ENCODE 10.8 -102.1 -102050 1.6 USF1 MAX MYC WWC2 WWC2-AS2 WWC2-AS1 GC04M183137
GH04I183256 Enhancer 0.5 ENCODE 11.1 -157.8 -157784 0.2 CTCF VEZF1 ZNF143 SMC3 REST RAD21 WWC2 WWC2-AS2 WWC2-AS1 CLDN22
GH04I183125 Enhancer 0.2 Ensembl 12 -25.9 -25902 0.2 WWC2-AS2 WWC2 GC04M183137
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around WWC2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for WWC2-AS2 Gene

Genomic Locations for WWC2-AS2 Gene
chr4:183,097,017-183,099,199
(GRCh38/hg38)
Size:
2,183 bases
Orientation:
Minus strand
chr4:184,018,170-184,020,352
(GRCh37/hg19)

Genomic View for WWC2-AS2 Gene

Genes around WWC2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WWC2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WWC2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WWC2-AS2 Gene

Proteins for WWC2-AS2 Gene

  • Protein details for WWC2-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96NR7-WWAS2_HUMAN
    Recommended name:
    Putative uncharacterized protein WWC2-AS2
    Protein Accession:
    Q96NR7

    Protein attributes for WWC2-AS2 Gene

    Size:
    200 amino acids
    Molecular mass:
    21356 Da
    Quaternary structure:
    No Data Available

neXtProt entry for WWC2-AS2 Gene

Post-translational modifications for WWC2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WWC2-AS2 Gene

Domains & Families for WWC2-AS2 Gene

Protein Domains for WWC2-AS2 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WWC2-AS2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WWC2-AS2 Gene

Function for WWC2-AS2 Gene

Phenotypes for WWC2-AS2 Gene

GenomeRNAi human phenotypes for WWC2-AS2:
genes like me logo Genes that share phenotypes with WWC2-AS2: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WWC2-AS2 Gene

Localization for WWC2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WWC2-AS2 Gene

Pathways & Interactions for WWC2-AS2 Gene

SuperPathways for WWC2-AS2 Gene

No Data Available

Interacting Proteins for WWC2-AS2 Gene

Gene Ontology (GO) - Biological Process for WWC2-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WWC2-AS2 Gene

Drugs & Compounds for WWC2-AS2 Gene

No Compound Related Data Available

Transcripts for WWC2-AS2 Gene

mRNA/cDNA for WWC2-AS2 Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(26) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WWC2-AS2 Gene

WWC2 antisense RNA 2:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for WWC2-AS2 Gene

No ASD Table

Relevant External Links for WWC2-AS2 Gene

GeneLoc Exon Structure for
WWC2-AS2
ECgene alternative splicing isoforms for
WWC2-AS2

Expression for WWC2-AS2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WWC2-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for WWC2-AS2 Gene

This gene is overexpressed in Testis (x6.7).

SOURCE GeneReport for Unigene cluster for WWC2-AS2 Gene:

Hs.745108
genes like me logo Genes that share expression patterns with WWC2-AS2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WWC2-AS2 Gene

Orthologs for WWC2-AS2 Gene

Evolution for WWC2-AS2 Gene

ENSEMBL:
Gene Tree for WWC2-AS2 (if available)
TreeFam:
Gene Tree for WWC2-AS2 (if available)

No data available for Orthologs for WWC2-AS2 Gene

Paralogs for WWC2-AS2 Gene

No data available for Paralogs for WWC2-AS2 Gene

Variants for WWC2-AS2 Gene

Sequence variations from dbSNP and Humsavar for WWC2-AS2 Gene

SNP ID Clin Chr 04 pos Variation AA Info Type
rs1000765432 -- 183,096,712(-) C/T downstream_transcript_variant
rs1000826131 -- 183,097,135(-) G/A non_coding_transcript_variant
rs1001008496 -- 183,101,073(-) G/A upstream_transcript_variant
rs1001594970 -- 183,099,111(-) C/G/T non_coding_transcript_variant
rs1002110841 -- 183,098,997(-) C/A/G non_coding_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for WWC2-AS2 Gene

Variant ID Type Subtype PubMed ID
dgv9415n54 CNV loss 21841781
dgv9416n54 CNV loss 21841781
esv26194 CNV loss 19812545
nsv1016376 CNV gain 25217958
nsv596340 CNV gain+loss 21841781
nsv596342 CNV gain 21841781
nsv822872 CNV gain 20364138

Additional Variant Information for WWC2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WWC2-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for WWC2-AS2 Gene

Disorders for WWC2-AS2 Gene

Additional Disease Information for WWC2-AS2

No disorders were found for WWC2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WWC2-AS2 Gene

Publications for WWC2-AS2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 4 58
  2. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier LW … Wilson RK (Nature 2005) 4 58
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard DS … MGC Project Team (Genome research 2004) 4 58
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg RL … Mammalian Gene Collection Program Team (Proceedings of the National Academy of Sciences of the United States of America 2002) 3 58

Products for WWC2-AS2 Gene

Sources for WWC2-AS2 Gene

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