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Aliases for WWC2-AS2 Gene

Subcategory (RNA class) for WWC2-AS2 Gene

lncRNA

Quality Score for this RNA gene is

3

Aliases for WWC2-AS2 Gene

  • WWC2 Antisense RNA 2 2 3 4 5
  • WWC2 Antisense RNA 2 (Non-Protein Coding) 2 3
  • C4orf38 3 4
  • Chromosome 4 Open Reading Frame 38 2
  • WWC2 Antisense Gene Protein 2 4

External Ids for WWC2-AS2 Gene

ORGUL Members for WWC2-AS2 Gene

Previous HGNC Symbols for WWC2-AS2 Gene

  • C4orf38

Previous GeneCards Identifiers for WWC2-AS2 Gene

  • GC04M184018

Summaries for WWC2-AS2 Gene

GeneCards Summary for WWC2-AS2 Gene

WWC2-AS2 (WWC2 Antisense RNA 2) is an RNA Gene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WWC2-AS2 Gene

Genomics for WWC2-AS2 Gene

Regulatory Elements for WWC2-AS2 Gene

Enhancers for WWC2-AS2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04F183422 0.9 ENCODE 13.5 -324.2 -324247 2.6 HDGF CREB3L1 ARID4B SIN3A DMAP1 ZNF48 YY1 ZNF766 ZNF143 FOS WWC2-AS2 CDKN2AIP LOC100127981
GH04F183073 1 Ensembl ENCODE 11.8 +24.7 24728 1.9 ELF3 CTCF TEAD4 MAX CEBPG ZIC2 ZNF2 RAD21 TEAD3 ZNF143 WWC2 WWC2-AS2 LOC105377578 FAM92A1P2
GH04F183256 0.6 ENCODE 11.1 -157.8 -157784 0.2 CTCF SMC3 RAD21 WWC2 WWC2-AS2 WWC2-AS1 CLDN22
GH04F183442 0.5 ENCODE 10.9 -345.3 -345314 3.8 HDGF PKNOX1 CREB3L1 MLX ZFP64 ARID4B SIN3A DMAP1 ZNF2 YY1 CDKN2AIP WWC2-AS2 TRAPPC11 RWDD4 LOC100127981
GH04F183200 0.8 Ensembl ENCODE 10.8 -102.1 -102050 1.6 SIN3A MAX MYC WWC2 WWC2-AS2 WWC2-AS1 GC04M183137
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around WWC2-AS2 on UCSC Golden Path with GeneCards custom track

Genomic Location for WWC2-AS2 Gene

Chromosome:
4
Start:
183,097,017 bp from pter
End:
183,099,199 bp from pter
Size:
2,183 bases
Orientation:
Minus strand

Genomic View for WWC2-AS2 Gene

Genes around WWC2-AS2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WWC2-AS2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WWC2-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WWC2-AS2 Gene

Proteins for WWC2-AS2 Gene

  • Protein details for WWC2-AS2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q96NR7-WWAS2_HUMAN
    Recommended name:
    Putative uncharacterized protein WWC2-AS2
    Protein Accession:
    Q96NR7

    Protein attributes for WWC2-AS2 Gene

    Size:
    200 amino acids
    Molecular mass:
    21356 Da
    Quaternary structure:
    No Data Available

neXtProt entry for WWC2-AS2 Gene

Post-translational modifications for WWC2-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WWC2-AS2 Gene

Domains & Families for WWC2-AS2 Gene

Protein Domains for WWC2-AS2 Gene

ProtoNet:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WWC2-AS2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WWC2-AS2 Gene

Function for WWC2-AS2 Gene

Phenotypes for WWC2-AS2 Gene

GenomeRNAi human phenotypes for WWC2-AS2:
genes like me logo Genes that share phenotypes with WWC2-AS2: view

Animal Model Products

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WWC2-AS2 Gene

Localization for WWC2-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for WWC2-AS2 Gene

Pathways & Interactions for WWC2-AS2 Gene

SuperPathways for WWC2-AS2 Gene

No Data Available

Interacting Proteins for WWC2-AS2 Gene

Gene Ontology (GO) - Biological Process for WWC2-AS2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WWC2-AS2 Gene

Transcripts for WWC2-AS2 Gene

mRNA/cDNA for WWC2-AS2 Gene

(1) REFSEQ mRNAs :
(5) Additional mRNA sequences :
(26) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WWC2-AS2 Gene

WWC2 antisense RNA 2:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for WWC2-AS2 Gene

No ASD Table

Relevant External Links for WWC2-AS2 Gene

GeneLoc Exon Structure for
WWC2-AS2
ECgene alternative splicing isoforms for
WWC2-AS2

Expression for WWC2-AS2 Gene

mRNA expression in normal human tissues for WWC2-AS2 Gene

mRNA differential expression in normal tissues according to GTEx for WWC2-AS2 Gene

This gene is overexpressed in Testis (x6.7).

SOURCE GeneReport for Unigene cluster for WWC2-AS2 Gene:

Hs.745108
genes like me logo Genes that share expression patterns with WWC2-AS2: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for WWC2-AS2 Gene

Orthologs for WWC2-AS2 Gene

Evolution for WWC2-AS2 Gene

ENSEMBL:
Gene Tree for WWC2-AS2 (if available)
TreeFam:
Gene Tree for WWC2-AS2 (if available)

No data available for Orthologs for WWC2-AS2 Gene

Paralogs for WWC2-AS2 Gene

No data available for Paralogs for WWC2-AS2 Gene

Variants for WWC2-AS2 Gene

Sequence variations from dbSNP and Humsavar for WWC2-AS2 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type
rs11155 -- 183,097,612(-) GGTCG(C/T)GTTTG nc-transcript-variant, upstream-variant-2KB
rs111862979 -- 183,100,087(+) GAGCT(C/G)TTGGC intron-variant, upstream-variant-2KB
rs111989806 -- 183,097,195(+) CCAAT(A/T)TAGGG nc-transcript-variant, upstream-variant-2KB
rs114123826 -- 183,096,661(+) GAACA(G/T)CAGAG downstream-variant-500B
rs114170858 -- 183,097,880(+) CGGAG(G/T)CCTGC nc-transcript-variant, upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for WWC2-AS2 Gene

Variant ID Type Subtype PubMed ID
dgv9415n54 CNV loss 21841781
dgv9416n54 CNV loss 21841781
esv26194 CNV loss 19812545
nsv1016376 CNV gain 25217958
nsv596340 CNV gain+loss 21841781
nsv596342 CNV gain 21841781
nsv822872 CNV gain 20364138

Relevant External Links for WWC2-AS2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WWC2-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for WWC2-AS2 Gene

Disorders for WWC2-AS2 Gene

Relevant External Links for WWC2-AS2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
WWC2-AS2

No disorders were found for WWC2-AS2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WWC2-AS2 Gene

Publications for WWC2-AS2 Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3 4 64
  2. Generation and annotation of the DNA sequences of human chromosomes 2 and 4. (PMID: 15815621) Hillier L.W. … Wilson R.K. (Nature 2005) 4 64
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4 64
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3 64

Products for WWC2-AS2 Gene

Sources for WWC2-AS2 Gene

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