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Aliases for WTH3DI Gene

Aliases for WTH3DI Gene

  • RAB6C-Like 3

External Ids for WTH3DI Gene

Previous GeneCards Identifiers for WTH3DI Gene

  • GC02M132121

Summaries for WTH3DI Gene

GeneCards Summary for WTH3DI Gene

WTH3DI (RAB6C-Like) is a Protein Coding gene. Among its related pathways are Signaling by GPCR and Signaling by NOTCH1 PEST Domain Mutants in Cancer. An important paralog of this gene is RAB6C.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WTH3DI Gene

Genomics for WTH3DI Gene

Genomic Location for WTH3DI Gene

Start:
131,360,492 bp from pter
End:
131,364,158 bp from pter
Size:
3,667 bases
Orientation:
Minus strand

Genomic View for WTH3DI Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for WTH3DI Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WTH3DI Gene

No data available for Regulatory Elements for WTH3DI Gene

Proteins for WTH3DI Gene

Post-translational modifications for WTH3DI Gene

No Post-translational modifications

Other Protein References for WTH3DI Gene

REFSEQ proteins:

No data available for DME Specific Peptides for WTH3DI Gene

Domains for WTH3DI Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WTH3DI Gene

Function for WTH3DI Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for WTH3DI Gene

Localization for WTH3DI Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for WTH3DI Gene

Pathways for WTH3DI Gene

genes like me logo Genes that share pathways with WTH3DI: view

Pathways by source for WTH3DI Gene

Interacting Proteins for WTH3DI Gene

Gene Ontology (GO) - Biological Process for WTH3DI Gene

None

Transcripts for WTH3DI Gene

mRNA/cDNA for WTH3DI Gene

(1) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WTH3DI Gene

RAB6C-like:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for WTH3DI Gene

No ASD Table

Relevant External Links for WTH3DI Gene

GeneLoc Exon Structure for
WTH3DI

Expression for WTH3DI Gene

mRNA expression in normal human tissues for WTH3DI Gene

mRNA differential expression in normal tissues according to GTEx for WTH3DI Gene

This gene is overexpressed in Brain - Frontal Cortex (BA9) (4.9), Brain - Anterior cingulate cortex (BA24) (4.5), and Brain - Hypothalamus (4.4).

SOURCE GeneReport for Unigene cluster for WTH3DI Gene Hs.645670

genes like me logo Genes that share expressions with WTH3DI: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein expression and mRNA Expression by UniProt/SwissProt for WTH3DI Gene

Orthologs for WTH3DI Gene

Evolution for WTH3DI Gene

ENSEMBL:
Gene Tree for WTH3DI (if available)
TreeFam:
Gene Tree for WTH3DI (if available)

No data available for Orthologs for WTH3DI Gene

Paralogs for WTH3DI Gene

Paralogs for WTH3DI Gene

genes like me logo Genes that share paralogs with WTH3DI: view

Variants for WTH3DI Gene

Sequence variations from dbSNP and Humsavar for WTH3DI Gene

SNP ID Clin Chr 02 pos Sequence Context AA Info Type MAF
rs1881001 -- 131,363,777(+) TGGAG(C/G)AGCAT utr-variant-5-prime
rs3969326 -- 131,360,089(-) ctcca(C/T)ctttc downstream-variant-500B
rs5003378 -- 131,364,540(+) CAAGA(A/C)TTGTA upstream-variant-2KB
rs5003379 -- 131,364,534(+) ATTAC(A/C)CAAGA upstream-variant-2KB
rs5834289 -- 131,364,547(+) TGTAT(-/C)AAGAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for WTH3DI Gene

Variant ID Type Subtype PubMed ID
dgv1247e1 CNV Complex 17122850
nsv7327 OTHER Inversion 18451855
esv2670824 CNV Deletion 23128226
nsv524021 CNV Loss 19592680
dgv1252e1 CNV Complex 17122850
essv11772 CNV CNV 17122850
dgv1253e1 CNV Complex 17122850
dgv1254e1 CNV Complex 17122850
nsv428404 CNV Loss 18775914
dgv1255e1 CNV Complex 17122850
nsv10180 CNV Loss 18304495
dgv1256e1 CNV Complex 17122850
esv34412 CNV Gain 17911159
dgv4311n71 CNV Gain 21882294
dgv4312n71 CNV Loss 21882294
dgv4313n71 CNV Gain 21882294
esv27354 CNV Gain+Loss 19812545
nsv520930 CNV Gain 19592680
nsv818082 CNV Gain 17921354
dgv476n27 CNV Loss 19166990
nsv459396 CNV Gain 19166990
nsv470486 CNV Loss 18288195
nsv875115 CNV Gain 21882294
esv34704 CNV Gain 17911159
essv2396 CNV CNV 17122850
dgv1257e1 CNV Complex 17122850
essv1836 CNV CNV 17122850
nsv875116 CNV Loss 21882294
nsv522712 CNV Gain 19592680
nsv459407 CNV Loss 19166990
dgv4314n71 CNV Gain 21882294

Relevant External Links for WTH3DI Gene

HapMap Linkage Disequilibrium report
WTH3DI

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for WTH3DI Gene

Disorders for WTH3DI Gene

No disorders were found for WTH3DI Gene.

No data available for UniProtKB/Swiss-Prot for WTH3DI Gene

Publications for WTH3DI Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sulston J.E. … Waterston R. (Genome Res. 1998) 3
  2. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3
  3. Screening for target Rabs of TBC (Tre-2/Bub2/Cdc16) domain-containing proteins based on their Rab-binding activity. (PMID: 16923123) Itoh T. … Fukuda M. (Genes Cells 2006) 3
  4. A proteome-wide, quantitative survey of in vivo ubiquitylation sites reveals widespread regulatory roles. (PMID: 21890473) Wagner S.A. … Choudhary C. (Mol. Cell Proteomics 2011) 3

Products for WTH3DI Gene

Sources for WTH3DI Gene

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