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Aliases for WTAPP1 Gene

Aliases for WTAPP1 Gene

  • Wilms Tumor 1 Associated Protein Pseudogene 1 2 3

External Ids for WTAPP1 Gene

Previous GeneCards Identifiers for WTAPP1 Gene

  • GC11P102618

Summaries for WTAPP1 Gene

GeneCards Summary for WTAPP1 Gene

WTAPP1 (Wilms Tumor 1 Associated Protein Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WTAPP1 Gene

Genomics for WTAPP1 Gene

Genomic Location for WTAPP1 Gene

Chromosome:
11
Start:
102,746,968 bp from pter
End:
102,836,766 bp from pter
Size:
89,799 bases
Orientation:
Plus strand

Genomic View for WTAPP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for WTAPP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WTAPP1 Gene

No data available for Regulatory Elements for WTAPP1 Gene

Proteins for WTAPP1 Gene

Post-translational modifications for WTAPP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WTAPP1 Gene

Domains & Families for WTAPP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WTAPP1 Gene

Function for WTAPP1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WTAPP1 Gene

Localization for WTAPP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for WTAPP1 Gene

Pathways & Interactions for WTAPP1 Gene

SuperPathways for WTAPP1 Gene

No Data Available

Interacting Proteins for WTAPP1 Gene

Gene Ontology (GO) - Biological Process for WTAPP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WTAPP1 Gene

Drugs & Compounds for WTAPP1 Gene

No Compound Related Data Available

Transcripts for WTAPP1 Gene

mRNA/cDNA for WTAPP1 Gene

(2) Additional mRNA sequences :
(5) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WTAPP1 Gene

Wilms tumor 1 associated protein pseudogene 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for WTAPP1 Gene

No ASD Table

Relevant External Links for WTAPP1 Gene

GeneLoc Exon Structure for
WTAPP1
ECgene alternative splicing isoforms for
WTAPP1

Expression for WTAPP1 Gene

mRNA expression in normal human tissues for WTAPP1 Gene

mRNA differential expression in normal tissues according to GTEx for WTAPP1 Gene

This gene is overexpressed in Minor Salivary Gland (x14.0) and Testis (x5.7).

SOURCE GeneReport for Unigene cluster for WTAPP1 Gene Hs.661772

genes like me logo Genes that share expression patterns with WTAPP1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for WTAPP1 Gene

Orthologs for WTAPP1 Gene

Evolution for WTAPP1 Gene

ENSEMBL:
Gene Tree for WTAPP1 (if available)
TreeFam:
Gene Tree for WTAPP1 (if available)

No data available for Orthologs for WTAPP1 Gene

Paralogs for WTAPP1 Gene

No data available for Paralogs for WTAPP1 Gene

Variants for WTAPP1 Gene

Sequence variations from dbSNP and Humsavar for WTAPP1 Gene

SNP ID Clin Chr 11 pos Sequence Context AA Info Type MAF
rs470130 -- 102,784,532(-) gtatg(A/G)ggatt intron-variant
rs470206 -- 102,800,447(-) ACACT(A/G)TGAGC intron-variant
rs470226 -- 102,785,475(-) CCTGC(A/G)TTCTG intron-variant
rs470234 -- 102,811,075(-) ATCTG(A/C)GGGAT intron-variant
rs470236 -- 102,787,479(-) gtata(C/T)gttat intron-variant

Relevant External Links for WTAPP1 Gene

HapMap Linkage Disequilibrium report
WTAPP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WTAPP1 Gene

Disorders for WTAPP1 Gene

Relevant External Links for WTAPP1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
WTAPP1
genes like me logo Genes that share disorders with WTAPP1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WTAPP1 Gene

Publications for WTAPP1 Gene

  1. Genome-wide association study of CSF levels of 59 alzheimer's disease candidate proteins: significant associations with proteins involved in amyloid processing and inflammation. (PMID: 25340798) Kauwe J.S. … Goate A.M. (PLoS Genet. 2014) 67
  2. Variation at the NFATC2 locus increases the risk of thiazolidinedione-induced edema in the Diabetes REduction Assessment with ramipril and rosiglitazone Medication (DREAM) study. (PMID: 20628086) Bailey S.D. … Anand S. (Diabetes Care 2010) 67
  3. Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. (PMID: 19913121) Talmud P.J. … . (Am. J. Hum. Genet. 2009) 67
  4. Genome-wide association scan identifies variants near Matrix Metalloproteinase (MMP) genes on chromosome 11q21-22 strongly associated with serum MMP-1 levels. (PMID: 20031604) Cheng Y.C. … Pollin T.I. (Circ Cardiovasc Genet 2009) 67
  5. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 67

Products for WTAPP1 Gene

Sources for WTAPP1 Gene

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