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Aliases for WNT8A Gene

Aliases for WNT8A Gene

  • Wnt Family Member 8A 2 3 5
  • Wingless-Type MMTV Integration Site Family, Member 8A 2 3
  • Protein Wnt-8d 3 4
  • WNT8d 3 4
  • Protein Wnt-8a 3

External Ids for WNT8A Gene

Previous GeneCards Identifiers for WNT8A Gene

  • GC05P137294
  • GC05P137450
  • GC05P137495
  • GC05P137447
  • GC05P132610

Summaries for WNT8A Gene

Entrez Gene Summary for WNT8A Gene

  • The WNT gene family consists of structurally related genes which encode secreted signaling proteins. These proteins have been implicated in oncogenesis and in several developmental processes, including regulation of cell fate and patterning during embryogenesis. This gene is a member of the WNT gene family, and may be implicated in development of early embryos as well as germ cell tumors. Multiple alternatively spliced transcript variants have been found for this gene. [provided by RefSeq, Jul 2014]

GeneCards Summary for WNT8A Gene

WNT8A (Wnt Family Member 8A) is a Protein Coding gene. Among its related pathways are Wnt Signaling Pathways: beta-Catenin-independent Wnt/Ca2+ Signaling and Other Non-canonical Wnt Signaling Pathways and Transcription Androgen Receptor nuclear signaling. GO annotations related to this gene include receptor binding and receptor agonist activity. An important paralog of this gene is WNT8B.

UniProtKB/Swiss-Prot for WNT8A Gene

  • Ligand for members of the frizzled family of seven transmembrane receptors. May play an important role in the development and differentiation of certain forebrain structures, notably the hippocampus.

No data available for CIViC summary , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WNT8A Gene

Genomics for WNT8A Gene

Regulatory Elements for WNT8A Gene

Enhancers for WNT8A Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH05G138035 1.2 Ensembl ENCODE 11.2 -47.8 -47795 1.0 PKNOX1 FOXA2 ARNT ARID4B SIN3A ZNF2 YY1 ZNF121 ZNF143 DEK RNU6-1148P WNT8A NME5 RNU6-888P LOC100130172 ENSG00000250260
GH05G138027 1.1 ENCODE 11.1 -52.6 -52594 6.8 HDGF PKNOX1 CREB3L1 ARID4B SIN3A DMAP1 ZNF2 YY1 ZNF143 ZNF207 RNU6-1148P NME5 WNT8A RNU6-888P LOC100130172 MYOT LOC101928005 FAM13B GC05P137995
GH05G138034 0.5 FANTOM5 11.2 -49.0 -48957 0.2 ZNF362 ZNF384 EP300 NME5 RNU6-1148P WNT8A RNU6-888P FAM53C PKD2L2 FAM13B KDM3B LOC100130172 ENSG00000250260
GH05G138540 1.9 FANTOM5 Ensembl ENCODE dbSUPER 2 +459.8 459787 7.0 CREB3L1 DMAP1 YY1 SLC30A9 ZNF143 ZNF263 SP3 NFYC TBX21 ZNF610 ETF1 WNT8A FAM53C GC05M138545 GC05P138544
GH05G138449 1.8 FANTOM5 Ensembl ENCODE dbSUPER 1.4 +366.2 366168 1.0 HDGF ATF1 ARID4B SIN3A ZNF2 ZNF48 GLIS2 ZNF143 ZNF207 DEK REEP2 LRRTM2 NME5 WNT8A ENSG00000271196 GC05P138442
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around WNT8A on UCSC Golden Path with GeneCards custom track

Genomic Location for WNT8A Gene

Chromosome:
5
Start:
138,083,892 bp from pter
End:
138,096,730 bp from pter
Size:
12,839 bases
Orientation:
Plus strand

Genomic View for WNT8A Gene

Genes around WNT8A on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WNT8A Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WNT8A Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WNT8A Gene

Proteins for WNT8A Gene

  • Protein details for WNT8A Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9H1J5-WNT8A_HUMAN
    Recommended name:
    Protein Wnt-8a
    Protein Accession:
    Q9H1J5
    Secondary Accessions:
    • Q96S51

    Protein attributes for WNT8A Gene

    Size:
    351 amino acids
    Molecular mass:
    38849 Da
    Quaternary structure:
    No Data Available

    Alternative splice isoforms for WNT8A Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for WNT8A Gene

Post-translational modifications for WNT8A Gene

  • Palmitoleylation is required for efficient binding to frizzled receptors (By similarity). Depalmitoleylation leads to Wnt signaling pathway inhibition (By similarity).
  • Proteolytic processing by TIKI1 and TIKI2 promotes oxidation and formation of large disulfide-bond oligomers, leading to inactivation of WNT8A.
  • Glycosylation at isoforms=2103, posLast=262262, and Asn281
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for WNT8A Gene

Domains & Families for WNT8A Gene

Gene Families for WNT8A Gene

Protein Domains for WNT8A Gene

Suggested Antigen Peptide Sequences for WNT8A Gene

Graphical View of Domain Structure for InterPro Entry

Q9H1J5

UniProtKB/Swiss-Prot:

WNT8A_HUMAN :
  • Belongs to the Wnt family.
Family:
  • Belongs to the Wnt family.
genes like me logo Genes that share domains with WNT8A: view

Function for WNT8A Gene

Molecular function for WNT8A Gene

UniProtKB/Swiss-Prot Function:
Ligand for members of the frizzled family of seven transmembrane receptors. May play an important role in the development and differentiation of certain forebrain structures, notably the hippocampus.

Gene Ontology (GO) - Molecular Function for WNT8A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005102 receptor binding IEA --
GO:0005109 frizzled binding NAS 11408932
GO:0048018 receptor agonist activity NAS 11408932
genes like me logo Genes that share ontologies with WNT8A: view
genes like me logo Genes that share phenotypes with WNT8A: view

Animal Models for WNT8A Gene

MGI Knock Outs for WNT8A:

Animal Model Products

CRISPR Products

miRNA for WNT8A Gene

miRTarBase miRNAs that target WNT8A

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for WNT8A

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , Transcription Factor Targets and HOMER Transcription for WNT8A Gene

Localization for WNT8A Gene

Subcellular locations from UniProtKB/Swiss-Prot for WNT8A Gene

Secreted, extracellular space, extracellular matrix.

Subcellular locations from

COMPARTMENTS
Extracellular space Cytosol Plasma membrane Cytoskeleton Lysosome Endosome Peroxisome ER Golgi Apparatus Nucleus Mitochondrion 0 1 2 3 4 5 Confidence
COMPARTMENTS Subcellular localization image for WNT8A gene
Compartment Confidence
extracellular 5
plasma membrane 2
cytosol 2
cytoskeleton 1

Gene Ontology (GO) - Cellular Components for WNT8A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005576 extracellular region TAS --
GO:0005578 proteinaceous extracellular matrix ISS,IEA --
GO:0005615 colocalizes_with extracellular space IBA,ISS --
genes like me logo Genes that share ontologies with WNT8A: view

Pathways & Interactions for WNT8A Gene

genes like me logo Genes that share pathways with WNT8A: view

SIGNOR curated interactions for WNT8A Gene

Activates:
Is inactivated by:

Gene Ontology (GO) - Biological Process for WNT8A Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003002 regionalization IEA --
GO:0007275 multicellular organism development IEA --
GO:0007492 endoderm development IEA --
GO:0009949 polarity specification of anterior/posterior axis IEA --
GO:0010085 polarity specification of proximal/distal axis IEA --
genes like me logo Genes that share ontologies with WNT8A: view

Drugs & Compounds for WNT8A Gene

No Compound Related Data Available

Transcripts for WNT8A Gene

mRNA/cDNA for WNT8A Gene

(8) REFSEQ mRNAs :
(6) Selected AceView cDNA sequences:
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for WNT8A

Alternative Splicing Database (ASD) splice patterns (SP) for WNT8A Gene

ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6a · 6b ^ 7
SP1:
SP2:

Relevant External Links for WNT8A Gene

GeneLoc Exon Structure for
WNT8A
ECgene alternative splicing isoforms for
WNT8A

Expression for WNT8A Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WNT8A Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for WNT8A Gene

This gene is overexpressed in Brain - Putamen (basal ganglia) (x8.5), Brain - Nucleus accumbens (basal ganglia) (x7.8), Brain - Caudate (basal ganglia) (x6.6), and Testis (x6.1).

Protein differential expression in normal tissues from HIPED for WNT8A Gene

This gene is overexpressed in Bone marrow mesenchymal stem cell (68.5).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for WNT8A Gene



Protein tissue co-expression partners for WNT8A Gene

- Elite partner

NURSA nuclear receptor signaling pathways regulating expression of WNT8A Gene:

WNT8A

SOURCE GeneReport for Unigene cluster for WNT8A Gene:

Hs.591274
genes like me logo Genes that share expression patterns with WNT8A: view

Primer Products

No data available for mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WNT8A Gene

Orthologs for WNT8A Gene

This gene was present in the common ancestor of animals.

Orthologs for WNT8A Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia WNT8A 34 35
  • 99.43 (n)
dog
(Canis familiaris)
Mammalia WNT8A 34 35
  • 89.74 (n)
cow
(Bos Taurus)
Mammalia WNT8A 34 35
  • 88.79 (n)
rat
(Rattus norvegicus)
Mammalia Wnt8a 34
  • 84.53 (n)
mouse
(Mus musculus)
Mammalia Wnt8a 34 16 35
  • 83.86 (n)
platypus
(Ornithorhynchus anatinus)
Mammalia -- 35
  • 20 (a)
ManyToMany
chicken
(Gallus gallus)
Aves WNT8A 34
  • 72.53 (n)
WNT8C 35
  • 71 (a)
OneToOne
lizard
(Anolis carolinensis)
Reptilia WNT8A 35
  • 68 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia wnt8a 34
  • 71.35 (n)
Str.15027 34
African clawed frog
(Xenopus laevis)
Amphibia Xwnt-8 34
zebrafish
(Danio rerio)
Actinopterygii wnt8a 34 35 35
  • 68.09 (n)
-- 34
fruit fly
(Drosophila melanogaster)
Insecta Wnt4 35
  • 17 (a)
ManyToMany
worm
(Caenorhabditis elegans)
Secernentea egl-20 35
  • 28 (a)
ManyToMany
sea squirt
(Ciona savignyi)
Ascidiacea -- 35
  • 20 (a)
ManyToMany
Species where no ortholog for WNT8A was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)

Evolution for WNT8A Gene

ENSEMBL:
Gene Tree for WNT8A (if available)
TreeFam:
Gene Tree for WNT8A (if available)

Paralogs for WNT8A Gene

Paralogs for WNT8A Gene

(16) SIMAP similar genes for WNT8A Gene using alignment to 3 proteins:

genes like me logo Genes that share paralogs with WNT8A: view

Variants for WNT8A Gene

Sequence variations from dbSNP and Humsavar for WNT8A Gene

SNP ID Clin Chr 05 pos Sequence Context AA Info Type
rs1000010025 -- 138,088,385(+) GGAGT(C/G)TCGCT intron-variant
rs1000515504 -- 138,083,156(+) GGCAC(C/G)TGTAG intron-variant, upstream-variant-2KB
rs1000576408 -- 138,075,509(+) AGGCC(A/G)GGTAT upstream-variant-2KB
rs1000620912 -- 138,089,939(+) TTATA(A/G)GCATG intron-variant
rs1000658499 -- 138,076,560(+) GAAAA(A/G)AAAAT upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for WNT8A Gene

Variant ID Type Subtype PubMed ID
esv3575884 CNV gain 25503493
esv3606913 CNV gain 21293372
nsv830502 CNV gain 17160897

Variation tolerance for WNT8A Gene

Residual Variation Intolerance Score: 65.7% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 1.14; 23.03% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for WNT8A Gene

Human Gene Mutation Database (HGMD)
WNT8A
SNPedia medical, phenotypic, and genealogical associations of SNPs for
WNT8A

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for WNT8A Gene

Disorders for WNT8A Gene

Relevant External Links for WNT8A

Genetic Association Database (GAD)
WNT8A
Human Genome Epidemiology (HuGE) Navigator
WNT8A
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
WNT8A

No disorders were found for WNT8A Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WNT8A Gene

Publications for WNT8A Gene

  1. Molecular cloning and characterization of human WNT8A. (PMID: 11408932) Saitoh T. … Katoh M. (Int. J. Oncol. 2001) 2 3 4 64
  2. Studies with Wnt genes and nonsyndromic cleft lip and palate. (PMID: 20890934) Menezes R. … Vieira A.R. (Birth Defects Res. Part A Clin. Mol. Teratol. 2010) 3 46 64
  3. Variation in WNT genes is associated with non-syndromic cleft lip with or without cleft palate. (PMID: 18413325) Chiquet B.T. … Hecht J.T. (Hum. Mol. Genet. 2008) 3 46 64
  4. Polymorphisms and expression of the WNT8A gene in Hirschsprung's disease. (PMID: 23836442) Gao H. … Wang W. (Int. J. Mol. Med. 2013) 3 64
  5. Meta-analysis identifies six new susceptibility loci for atrial fibrillation. (PMID: 22544366) Ellinor P.T. … KAoAob S. (Nat. Genet. 2012) 3 64

Products for WNT8A Gene

  • Addgene plasmids for WNT8A

Sources for WNT8A Gene

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