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Aliases for WI2-2373I1.2 Gene

Subcategory (RNA class) for WI2-2373I1.2 Gene

ncRNA

Quality Score for this RNA gene is

2

Aliases for WI2-2373I1.2 Gene

  • Forkhead Box L1-Like 3
  • AC187653.1 5

External Ids for WI2-2373I1.2 Gene

Previous GeneCards Identifiers for WI2-2373I1.2 Gene

  • GC07P000338

Summaries for WI2-2373I1.2 Gene

GeneCards Summary for WI2-2373I1.2 Gene

WI2-2373I1.2 (Forkhead Box L1-Like) is an RNA Gene, and is affiliated with the ncRNA class. An important paralog of this gene is FOXE1.

Additional gene information for WI2-2373I1.2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WI2-2373I1.2 Gene

Genomics for WI2-2373I1.2 Gene

GeneHancer (GH) Regulatory Elements for WI2-2373I1.2 Gene

Promoters and enhancers for WI2-2373I1.2 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I000294 Enhancer 0.7 ENCODE 0.8 +4.5 4547 0.7 ELF3 SOX5 GATAD2A SAP130 MLX ARID4B ZMYM3 DMAP1 ZBTB7B GABPA ENSG00000249852 FAM20C WI2-2373I1.2 GC07P000306
GH07I000284 Enhancer 0.3 ENCODE 0.8 -5.0 -4968 2 ZNF512 GC07P000283 ENSG00000249852 FAM20C WI2-2373I1.2
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around WI2-2373I1.2 on UCSC Golden Path with GeneCards custom track

Genomic Locations for WI2-2373I1.2 Gene

Genomic Locations for WI2-2373I1.2 Gene
chr7:290,170-294,422
(GRCh38/hg38)
Size:
4,253 bases
Orientation:
Plus strand
chr7:330,136-331,454
(GRCh37/hg19)

Genomic View for WI2-2373I1.2 Gene

Genes around WI2-2373I1.2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WI2-2373I1.2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WI2-2373I1.2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WI2-2373I1.2 Gene

Proteins for WI2-2373I1.2 Gene

  • Protein details for WI2-2373I1.2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1W2PRP0
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1W2PRP0

    Protein attributes for WI2-2373I1.2 Gene

    Size:
    233 amino acids
    Molecular mass:
    25969 Da
    Quaternary structure:
    No Data Available
  • Protein details for WI2-2373I1.2 Gene (UniProtKB/TrEMBL)

    Protein Symbol:
    A0A1W2PRW6
    Recommended name:
    Uncharacterized protein
    Protein Accession:
    A0A1W2PRW6

    Protein attributes for WI2-2373I1.2 Gene

    Size:
    48 amino acids
    Molecular mass:
    5581 Da
    Quaternary structure:
    No Data Available

neXtProt entry for WI2-2373I1.2 Gene

Post-translational modifications for WI2-2373I1.2 Gene

No Post-translational modifications

Other Protein References for WI2-2373I1.2 Gene

ENSEMBL proteins:
REFSEQ proteins:

No data available for DME Specific Peptides for WI2-2373I1.2 Gene

Domains & Families for WI2-2373I1.2 Gene

Protein Domains for WI2-2373I1.2 Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WI2-2373I1.2: view

No data available for Gene Families , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WI2-2373I1.2 Gene

Function for WI2-2373I1.2 Gene

Gene Ontology (GO) - Molecular Function for WI2-2373I1.2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0003700 DNA binding transcription factor activity IEA --
GO:0043565 sequence-specific DNA binding IEA --
genes like me logo Genes that share ontologies with WI2-2373I1.2: view

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WI2-2373I1.2 Gene

Localization for WI2-2373I1.2 Gene

Gene Ontology (GO) - Cellular Components for WI2-2373I1.2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005634 nucleus IEA --
genes like me logo Genes that share ontologies with WI2-2373I1.2: view

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Subcellular locations from the Human Protein Atlas (HPA) for WI2-2373I1.2 Gene

Pathways & Interactions for WI2-2373I1.2 Gene

SuperPathways for WI2-2373I1.2 Gene

No Data Available

Interacting Proteins for WI2-2373I1.2 Gene

Gene Ontology (GO) - Biological Process for WI2-2373I1.2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0006351 transcription, DNA-templated IEA --
GO:0006355 regulation of transcription, DNA-templated IEA --
genes like me logo Genes that share ontologies with WI2-2373I1.2: view

No data available for Pathways by source and SIGNOR curated interactions for WI2-2373I1.2 Gene

Drugs & Compounds for WI2-2373I1.2 Gene

No Compound Related Data Available

Transcripts for WI2-2373I1.2 Gene

mRNA/cDNA for WI2-2373I1.2 Gene

(2) REFSEQ mRNAs :
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for WI2-2373I1.2 Gene

No ASD Table

Relevant External Links for WI2-2373I1.2 Gene

GeneLoc Exon Structure for
WI2-2373I1.2

Expression for WI2-2373I1.2 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WI2-2373I1.2 Gene

Orthologs for WI2-2373I1.2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for WI2-2373I1.2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia LOC453234 33
  • 99.28 (n)
cow
(Bos Taurus)
Mammalia LOC783396 33
  • 84.53 (n)
mouse
(Mus musculus)
Mammalia Gm5294 33 16
  • 81.76 (n)
rat
(Rattus norvegicus)
Mammalia LOC680273 33
  • 79.15 (n)
chicken
(Gallus gallus)
Aves LOC427656 33
  • 62.34 (n)
tropical clawed frog
(Silurana tropicalis)
Amphibia LOC100488925 33
  • 55.94 (n)
zebrafish
(Danio rerio)
Actinopterygii si:dkey-7e14.3 33
  • 60.52 (n)
Species where no ortholog for WI2-2373I1.2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for WI2-2373I1.2 Gene

ENSEMBL:
Gene Tree for WI2-2373I1.2 (if available)
TreeFam:
Gene Tree for WI2-2373I1.2 (if available)

Paralogs for WI2-2373I1.2 Gene

Paralogs for WI2-2373I1.2 Gene

genes like me logo Genes that share paralogs with WI2-2373I1.2: view

Variants for WI2-2373I1.2 Gene

Sequence variations from dbSNP and Humsavar for WI2-2373I1.2 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000045791 -- 289,554(+) C/A upstream_transcript_variant
rs1000676876 -- 289,716(+) C/T upstream_transcript_variant
rs1000977396 -- 291,235(+) C/T coding_sequence_variant, missense_variant
rs1001000109 -- 288,394(+) C/T upstream_transcript_variant
rs1001029776 -- 291,037(+) C/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for WI2-2373I1.2 Gene

Variant ID Type Subtype PubMed ID
dgv1242e214 CNV loss 21293372
esv2656628 CNV deletion 23128226
esv3611754 CNV gain 21293372
esv3611764 CNV gain 21293372
esv3611768 CNV gain 21293372

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Additional Variant Information for WI2-2373I1.2 Gene

Disorders for WI2-2373I1.2 Gene

Additional Disease Information for WI2-2373I1.2

No disorders were found for WI2-2373I1.2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WI2-2373I1.2 Gene

Publications for WI2-2373I1.2 Gene

No publications were found for WI2-2373I1.2 Gene.

Products for WI2-2373I1.2 Gene

Sources for WI2-2373I1.2 Gene

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