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Aliases for WHAMMP2 Gene

Aliases for WHAMMP2 Gene

  • WAS Protein Homolog Associated With Actin, Golgi Membranes And Microtubules Pseudogene 2 2 3 5
  • WAS Protein Homolog Associated With Actin, Golgi Membranes And Microtubules-Like 2 (Pseudogene) 2 3
  • WAS Protein Homology Region 2 Domain Containing 1-Like 2 (Pseudogene) 2 3
  • WHAMML2 3
  • WHDC1L2 3

External Ids for WHAMMP2 Gene

Previous HGNC Symbols for WHAMMP2 Gene

  • WHDC1L2
  • WHAMML2

Previous GeneCards Identifiers for WHAMMP2 Gene

  • GC15P028985
  • GC15P028987

Summaries for WHAMMP2 Gene

GeneCards Summary for WHAMMP2 Gene

WHAMMP2 (WAS Protein Homolog Associated With Actin, Golgi Membranes And Microtubules Pseudogene 2) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WHAMMP2 Gene

Genomics for WHAMMP2 Gene

Regulatory Elements for WHAMMP2 Gene

Enhancers for WHAMMP2 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around WHAMMP2 on UCSC Golden Path with GeneCards custom track

Promoters for WHAMMP2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around WHAMMP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for WHAMMP2 Gene

Chromosome:
15
Start:
28,737,583 bp from pter
End:
28,759,204 bp from pter
Size:
21,622 bases
Orientation:
Plus strand

Genomic View for WHAMMP2 Gene

Genes around WHAMMP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WHAMMP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WHAMMP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WHAMMP2 Gene

Proteins for WHAMMP2 Gene

Post-translational modifications for WHAMMP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WHAMMP2 Gene

Domains & Families for WHAMMP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WHAMMP2 Gene

Function for WHAMMP2 Gene

Phenotypes for WHAMMP2 Gene

GenomeRNAi human phenotypes for WHAMMP2:
genes like me logo Genes that share phenotypes with WHAMMP2: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WHAMMP2 Gene

Localization for WHAMMP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for WHAMMP2 Gene

Pathways & Interactions for WHAMMP2 Gene

SuperPathways for WHAMMP2 Gene

No Data Available

Interacting Proteins for WHAMMP2 Gene

Gene Ontology (GO) - Biological Process for WHAMMP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WHAMMP2 Gene

Drugs & Compounds for WHAMMP2 Gene

No Compound Related Data Available

Transcripts for WHAMMP2 Gene

mRNA/cDNA for WHAMMP2 Gene

Unigene Clusters for WHAMMP2 Gene

WAS protein homolog associated with actin, golgi membranes and microtubules pseudogene 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for WHAMMP2 Gene

No ASD Table

Relevant External Links for WHAMMP2 Gene

GeneLoc Exon Structure for
WHAMMP2
ECgene alternative splicing isoforms for
WHAMMP2

Expression for WHAMMP2 Gene

mRNA expression in normal human tissues for WHAMMP2 Gene

SOURCE GeneReport for Unigene cluster for WHAMMP2 Gene Hs.558967

genes like me logo Genes that share expression patterns with WHAMMP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for WHAMMP2 Gene

Orthologs for WHAMMP2 Gene

Evolution for WHAMMP2 Gene

ENSEMBL:
Gene Tree for WHAMMP2 (if available)
TreeFam:
Gene Tree for WHAMMP2 (if available)

No data available for Orthologs for WHAMMP2 Gene

Paralogs for WHAMMP2 Gene

No data available for Paralogs for WHAMMP2 Gene

Variants for WHAMMP2 Gene

Sequence variations from dbSNP and Humsavar for WHAMMP2 Gene

SNP ID Clin Chr 15 pos Sequence Context AA Info Type
rs9471 -- 28,758,116(-) GAGAT(A/G)TGGTT nc-transcript-variant
rs13529 -- 28,757,959(-) TTGGA(C/T)GGTTT nc-transcript-variant
rs13957 -- 28,758,072(-) TTTAG(C/T)TCCCA nc-transcript-variant
rs4966233 -- 28,742,435(+) TCTAC(G/T)TCTCG intron-variant
rs5021935 -- 28,735,900(-) TCAGG(C/T)TAGAA upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for WHAMMP2 Gene

Variant ID Type Subtype PubMed ID
nsv428299 CNV Loss 18775914
esv2749506 CNV Deletion 23290073
nsv832942 CNV Gain 17160897
nsv522597 CNV Loss 19592680
esv2751526 CNV Loss 17911159
nsv527255 CNV Gain 19592680
nsv507770 CNV Insertion 20534489

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Variation tolerance and Relevant External Links for WHAMMP2 Gene

Disorders for WHAMMP2 Gene

Relevant External Links for WHAMMP2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
WHAMMP2

No disorders were found for WHAMMP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WHAMMP2 Gene

Publications for WHAMMP2 Gene

  1. Insights into RNA biology from an atlas of mammalian mRNA-binding proteins. (PMID: 22658674) Castello A. … Hentze M.W. (Cell 2012) 3 67
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Large genomic duplicons map to sites of instability in the Prader-Willi/Angelman syndrome chromosome region (15q11-q13). (PMID: 10332034) Christian S.L. … Ledbetter D.H. (Hum. Mol. Genet. 1999) 3

Products for WHAMMP2 Gene

Sources for WHAMMP2 Gene

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