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Aliases for WDR86-AS1 Gene

Subcategory (RNA class) for WDR86-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for WDR86-AS1 Gene

  • WDR86 Antisense RNA 1 2 3 5
  • WDR86 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for WDR86-AS1 Gene

Previous GeneCards Identifiers for WDR86-AS1 Gene

  • GC07P151108

Summaries for WDR86-AS1 Gene

GeneCards Summary for WDR86-AS1 Gene

WDR86-AS1 (WDR86 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for WDR86-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WDR86-AS1 Gene

Genomics for WDR86-AS1 Gene

GeneHancer (GH) Regulatory Elements for WDR86-AS1 Gene

Promoters and enhancers for WDR86-AS1 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH07I151408 Promoter/Enhancer 1.9 EPDnew Ensembl ENCODE 550.8 +0.4 394 3.1 ELF3 PKNOX1 ZSCAN4 KLF17 ZNF76 ZNF2 RARA ZNF335 GLIS2 ZNF213 WDR86 WDR86-AS1 ENSG00000241456
GH07I151365 Enhancer 1.1 Ensembl ENCODE 12.1 -42.0 -41995 3.5 HDGF ATF1 ZNF2 ZNF48 YY1 ARID2 ZNF207 ZNF143 FOS ATF7 GC07M151365 WDR86 WDR86-AS1 CRYGN ENSG00000241456 RHEB SMARCD3 ENSG00000243018 NUB1 GC07P151348
GH07I150448 Promoter/Enhancer 2.4 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 4.8 -957.8 -957835 6.4 HDGF PKNOX1 SIN3A ARID2 ZNF207 ZNF143 ATF7 RUNX3 RXRA REST GIMAP8 GIMAP7 GIMAP1 ENSG00000244151 NUB1 GIMAP6 GIMAP5 STRADBP1 ZNF767P GIMAP2
GH07I151424 Enhancer 1.2 Ensembl ENCODE 8 +18.7 18682 6.5 HDGF FEZF1 GLI4 ZNF2 GLIS2 FOS RUNX3 ZNF214 RXRA TSHZ1 ENSG00000241456 WDR86 CRYGN WDR86-AS1 MIR3907
GH07I151379 Enhancer 0.7 Ensembl ENCODE 12.8 -27.8 -27817 3.2 BACH1 ZBTB8A SPI1 EZH2 WDR86 WDR86-AS1 ENSG00000241456 CRYGN SMARCD3 ENSG00000243018 NUB1 GC07M151365 PIR52552
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around WDR86-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for WDR86-AS1 Gene

Genomic Locations for WDR86-AS1 Gene
chr7:151,409,161-151,413,354
(GRCh38/hg38)
Size:
4,194 bases
Orientation:
Plus strand
chr7:151,106,247-151,110,440
(GRCh37/hg19)

Genomic View for WDR86-AS1 Gene

Genes around WDR86-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WDR86-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WDR86-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WDR86-AS1 Gene

Proteins for WDR86-AS1 Gene

Post-translational modifications for WDR86-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WDR86-AS1 Gene

Domains & Families for WDR86-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WDR86-AS1 Gene

Function for WDR86-AS1 Gene

Phenotypes From GWAS Catalog for WDR86-AS1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WDR86-AS1 Gene

Localization for WDR86-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WDR86-AS1 Gene

Pathways & Interactions for WDR86-AS1 Gene

SuperPathways for WDR86-AS1 Gene

No Data Available

Interacting Proteins for WDR86-AS1 Gene

Gene Ontology (GO) - Biological Process for WDR86-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WDR86-AS1 Gene

Drugs & Compounds for WDR86-AS1 Gene

No Compound Related Data Available

Transcripts for WDR86-AS1 Gene

mRNA/cDNA for WDR86-AS1 Gene

(4) Additional mRNA sequences :
(4) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WDR86-AS1 Gene

WDR86 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for WDR86-AS1 Gene

No ASD Table

Relevant External Links for WDR86-AS1 Gene

GeneLoc Exon Structure for
WDR86-AS1
ECgene alternative splicing isoforms for
WDR86-AS1

Expression for WDR86-AS1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WDR86-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for WDR86-AS1 Gene

This gene is overexpressed in Spleen (x8.2), Cervix - Endocervix (x6.9), Fallopian Tube (x4.9), and Thyroid (x4.3).

SOURCE GeneReport for Unigene cluster for WDR86-AS1 Gene:

Hs.659231
genes like me logo Genes that share expression patterns with WDR86-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WDR86-AS1 Gene

Orthologs for WDR86-AS1 Gene

Evolution for WDR86-AS1 Gene

ENSEMBL:
Gene Tree for WDR86-AS1 (if available)
TreeFam:
Gene Tree for WDR86-AS1 (if available)

No data available for Orthologs for WDR86-AS1 Gene

Paralogs for WDR86-AS1 Gene

No data available for Paralogs for WDR86-AS1 Gene

Variants for WDR86-AS1 Gene

Sequence variations from dbSNP and Humsavar for WDR86-AS1 Gene

SNP ID Clin Chr 07 pos Variation AA Info Type
rs1000077011 -- 151,407,731(+) T/A upstream_transcript_variant
rs1000534518 -- 151,407,632(+) A/T upstream_transcript_variant
rs1000808941 -- 151,409,028(+) T/C upstream_transcript_variant
rs1001812666 -- 151,407,657(+) G/A upstream_transcript_variant
rs1002510034 -- 151,413,414(+) G/A downstream_transcript_variant

Structural Variations from Database of Genomic Variants (DGV) for WDR86-AS1 Gene

Variant ID Type Subtype PubMed ID
dgv3695n106 OTHER inversion 24896259
nsv1067934 OTHER inversion 25765185
nsv1151906 OTHER inversion 26484159

Additional Variant Information for WDR86-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WDR86-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for WDR86-AS1 Gene

Disorders for WDR86-AS1 Gene

Additional Disease Information for WDR86-AS1

No disorders were found for WDR86-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WDR86-AS1 Gene

Publications for WDR86-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for WDR86-AS1 Gene

Sources for WDR86-AS1 Gene

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