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Aliases for WDR7-OT1 Gene

Subcategory (RNA class) for WDR7-OT1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for WDR7-OT1 Gene

  • WDR7 Overlapping Transcript 1 2 3 5
  • WDR7 Overlapping Transcript 1 (Non-Protein Coding) 2 3
  • WDR7 3UTR-Associated RNA 1 2 3
  • WDR7-UA1 3
  • WDR7-UT1 3

External Ids for WDR7-OT1 Gene

Previous HGNC Symbols for WDR7-OT1 Gene

  • WDR7-UA1
  • WDR7-UT1

Previous GeneCards Identifiers for WDR7-OT1 Gene

  • GC18P054698

Summaries for WDR7-OT1 Gene

GeneCards Summary for WDR7-OT1 Gene

WDR7-OT1 (WDR7 Overlapping Transcript 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for WDR7-OT1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WDR7-OT1 Gene

Genomics for WDR7-OT1 Gene

Genomic Location for WDR7-OT1 Gene

Chromosome:
18
Start:
57,027,832 bp from pter
End:
57,038,845 bp from pter
Size:
11,014 bases
Orientation:
Plus strand

Genomic View for WDR7-OT1 Gene

Genes around WDR7-OT1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WDR7-OT1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WDR7-OT1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WDR7-OT1 Gene

No data available for Regulatory Elements for WDR7-OT1 Gene

Proteins for WDR7-OT1 Gene

Post-translational modifications for WDR7-OT1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WDR7-OT1 Gene

Domains & Families for WDR7-OT1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WDR7-OT1 Gene

Function for WDR7-OT1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WDR7-OT1 Gene

Localization for WDR7-OT1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WDR7-OT1 Gene

Pathways & Interactions for WDR7-OT1 Gene

SuperPathways for WDR7-OT1 Gene

No Data Available

Interacting Proteins for WDR7-OT1 Gene

Gene Ontology (GO) - Biological Process for WDR7-OT1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WDR7-OT1 Gene

Drugs & Compounds for WDR7-OT1 Gene

No Compound Related Data Available

Transcripts for WDR7-OT1 Gene

mRNA/cDNA for WDR7-OT1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for WDR7-OT1 Gene

No ASD Table

Relevant External Links for WDR7-OT1 Gene

GeneLoc Exon Structure for
WDR7-OT1
ECgene alternative splicing isoforms for
WDR7-OT1

Expression for WDR7-OT1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WDR7-OT1 Gene

genes like me logo Genes that share expression patterns with WDR7-OT1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WDR7-OT1 Gene

Orthologs for WDR7-OT1 Gene

Evolution for WDR7-OT1 Gene

ENSEMBL:
Gene Tree for WDR7-OT1 (if available)
TreeFam:
Gene Tree for WDR7-OT1 (if available)

No data available for Orthologs for WDR7-OT1 Gene

Paralogs for WDR7-OT1 Gene

No data available for Paralogs for WDR7-OT1 Gene

Variants for WDR7-OT1 Gene

Sequence variations from dbSNP and Humsavar for WDR7-OT1 Gene

SNP ID Clin Chr 18 pos Sequence Context AA Info Type
rs1000159917 -- 57,035,386(+) AAGTG(C/T)TGCCC nc-transcript-variant
rs1000275012 -- 57,043,668(+) GGCAT(C/G)TGTTT intron-variant
rs1000465515 -- 57,037,928(+) GTTTA(C/T)ATAGT intron-variant
rs1000641888 -- 57,042,169(+) GCTGG(A/G)GAGTC intron-variant
rs1000732333 -- 57,037,696(+) ACCTC(C/T)TCTTC intron-variant

Relevant External Links for WDR7-OT1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WDR7-OT1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WDR7-OT1 Gene

Disorders for WDR7-OT1 Gene

No disorders were found for WDR7-OT1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for WDR7-OT1 Gene

Publications for WDR7-OT1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60

Products for WDR7-OT1 Gene

Sources for WDR7-OT1 Gene

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