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Aliases for WDR38 Gene

Aliases for WDR38 Gene

  • WD Repeat Domain 38 2 3

External Ids for WDR38 Gene

Previous GeneCards Identifiers for WDR38 Gene

  • GC09P126657
  • GC09P127615
  • GC09P097229

Summaries for WDR38 Gene

GeneCards Summary for WDR38 Gene

WDR38 (WD Repeat Domain 38) is a Protein Coding gene. An important paralog of this gene is ATG16L1.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WDR38 Gene

Genomics for WDR38 Gene

Regulatory Elements for WDR38 Gene

Epigenetics Products

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat

Genomic Location for WDR38 Gene

124,853,348 bp from pter
124,857,891 bp from pter
4,544 bases
Plus strand

Genomic View for WDR38 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for WDR38 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WDR38 Gene

Proteins for WDR38 Gene

  • Protein details for WDR38 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    WD repeat-containing protein 38
    Protein Accession:
    Secondary Accessions:
    • A0PK24

    Protein attributes for WDR38 Gene

    314 amino acids
    Molecular mass:
    34312 Da
    Quaternary structure:
    No Data Available

neXtProt entry for WDR38 Gene

Proteomics data for WDR38 Gene at MOPED

Post-translational modifications for WDR38 Gene

  • Modification sites at PhosphoSitePlus
  • Modification sites at neXtProt

Other Protein References for WDR38 Gene

No data available for DME Specific Peptides for WDR38 Gene

Domains for WDR38 Gene

Gene Families for WDR38 Gene

Suggested Antigen Peptide Sequences for WDR38 Gene

Graphical View of Domain Structure for InterPro Entry



  • Contains 7 WD repeats.
  • Contains 7 WD repeats.
genes like me logo Genes that share domains with WDR38: view

Function for WDR38 Gene

Gene Ontology (GO) - Molecular Function for WDR38 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005515 protein binding --
genes like me logo Genes that share ontologies with WDR38: view

Animal Model Products

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for WDR38

In Situ Assay Products

Flow Cytometry Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WDR38 Gene

Localization for WDR38 Gene

Subcellular locations from

Jensen Localization Image for WDR38 Gene COMPARTMENTS Subcellular localization image for WDR38 gene
Compartment Confidence
cytosol 2
nucleus 2
extracellular 1
peroxisome 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for WDR38 Gene

Pathways for WDR38 Gene

SuperPathways for WDR38 Gene

No Data Available

Interacting Proteins for WDR38 Gene

Gene Ontology (GO) - Biological Process for WDR38 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0002244 hematopoietic progenitor cell differentiation --
genes like me logo Genes that share ontologies with WDR38: view

No data available for Pathways by source for WDR38 Gene

Transcripts for WDR38 Gene

mRNA/cDNA for WDR38 Gene

Unigene Clusters for WDR38 Gene

WD repeat domain 38:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for WDR38

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for WDR38 Gene

No ASD Table

Relevant External Links for WDR38 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for WDR38 Gene

mRNA expression in normal human tissues for WDR38 Gene

mRNA differential expression in normal tissues according to GTEx for WDR38 Gene

This gene is overexpressed in Testis (11.6), Fallopian Tube (8.5), Cervix - Endocervix (7.7), Lung (6.1), and Brain - Hypothalamus (4.0).

Integrated Proteomics: protein expression from ProteomicsDB, PaxDb, and MOPED for WDR38 Gene

SOURCE GeneReport for Unigene cluster for WDR38 Gene Hs.343383

genes like me logo Genes that share expressions with WDR38: view

Expression partners for WDR38 Gene

* - Elite partner

Primer Products

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues and mRNA Expression by UniProt/SwissProt for WDR38 Gene

Orthologs for WDR38 Gene

This gene was present in the common ancestor of animals and fungi.

Orthologs for WDR38 Gene

Organism Taxonomy Gene Similarity Type Details
(Bos Taurus)
Mammalia WDR38 35
  • 83.9 (n)
  • 80.07 (a)
WDR38 36
  • 80 (a)
(Mus musculus)
Mammalia Wdr38 35
  • 78.31 (n)
  • 76.61 (a)
Wdr38 16
Wdr38 36
  • 75 (a)
(Pan troglodytes)
Mammalia WDR38 35
  • 99.15 (n)
  • 98.73 (a)
WDR38 36
  • 99 (a)
(Rattus norvegicus)
Mammalia Wdr38 35
  • 79.11 (n)
  • 75.65 (a)
(Canis familiaris)
Mammalia WDR38 36
  • 75 (a)
(Monodelphis domestica)
Mammalia WDR38 36
  • 46 (a)
tropical clawed frog
(Silurana tropicalis)
Amphibia wdr38 35
  • 59.6 (n)
  • 53 (a)
(Danio rerio)
Actinopterygii wdr38 35
  • 55.22 (n)
  • 50.51 (a)
wdr38 36
  • 50 (a)
baker's yeast
(Saccharomyces cerevisiae)
Saccharomycetes RSA4 36
  • 16 (a)
Species with no ortholog for WDR38:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for WDR38 Gene

Gene Tree for WDR38 (if available)
Gene Tree for WDR38 (if available)

Paralogs for WDR38 Gene

genes like me logo Genes that share paralogs with WDR38: view

Variants for WDR38 Gene

Sequence variations from dbSNP and Humsavar for WDR38 Gene

SNP ID Clin Chr 09 pos Sequence Context AA Info Type MAF
rs2274970 - 124,856,497(-) AGATG(C/T)GTACG reference, missense, intron-variant
rs3814131 -- 124,853,716(-) TACTC(C/T)GGACT intron-variant
rs3814132 -- 124,853,697(-) TGAGC(C/T)ACTGC intron-variant
rs4837002 -- 124,851,890(+) ACAAG(G/T)TCTAC upstream-variant-2KB
rs4838226 -- 124,854,563(+) ACACA(A/G)TAATA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for WDR38 Gene

Variant ID Type Subtype PubMed ID
nsv831721 CNV Gain 17160897

Relevant External Links for WDR38 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for WDR38 Gene

Disorders for WDR38 Gene

No disorders were found for WDR38 Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for WDR38 Gene

Publications for WDR38 Gene

  1. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  2. DNA sequence and analysis of human chromosome 9. (PMID: 15164053) Humphray S.J. … Dunham I. (Nature 2004) 4
  3. The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PMID: 15489334) Gerhard D.S. … Malek J. (Genome Res. 2004) 4

Products for WDR38 Gene

Sources for WDR38 Gene

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