Free for academic non-profit institutions. Other users need a Commercial license

Aliases for WDFY3-AS2 Gene

Subcategory (RNA class) for WDFY3-AS2 Gene

antisense

Quality Score for this RNA gene is

3

Aliases for WDFY3-AS2 Gene

  • WDFY3 Antisense RNA 2 2 3
  • WDFY3 Antisense RNA 2 (Non-Protein Coding) 2 3
  • Chromosome 4 Open Reading Frame 12 2
  • Non-Protein Coding RNA 247 2
  • NCRNA00247 3
  • C4orf12 3
  • FBI4 3

External Ids for WDFY3-AS2 Gene

ORGUL Members for WDFY3-AS2 Gene

Previous Symbols for WDFY3-AS2 Gene

  • C4orf12
  • NCRNA00247

Summaries for WDFY3-AS2 Gene

GeneCards Summary for WDFY3-AS2 Gene

WDFY3-AS2 (WDFY3 Antisense RNA 2) is an RNA Gene, and belongs to the antisense RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WDFY3-AS2 Gene

Genomics for WDFY3-AS2 Gene

Genomic Location for WDFY3-AS2 Gene

Start:
84,965,682 bp from pter
End:
85,011,277 bp from pter
Size:
45,596 bases
Orientation:
Plus strand

Genomic View for WDFY3-AS2 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for WDFY3-AS2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WDFY3-AS2 Gene

No data available for Regulatory Elements for WDFY3-AS2 Gene

Proteins for WDFY3-AS2 Gene

Post-translational modifications for WDFY3-AS2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WDFY3-AS2 Gene

Domains for WDFY3-AS2 Gene

Gene Families for WDFY3-AS2 Gene

HGNC:
  • LNCRNA :Long non-coding RNAs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WDFY3-AS2: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WDFY3-AS2 Gene

Function for WDFY3-AS2 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for WDFY3-AS2 Gene

Localization for WDFY3-AS2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for WDFY3-AS2 Gene

Pathways for WDFY3-AS2 Gene

SuperPathways for WDFY3-AS2 Gene

No Data Available

Interacting Proteins for WDFY3-AS2 Gene

Gene Ontology (GO) - Biological Process for WDFY3-AS2 Gene

None

No data available for Pathways by source for WDFY3-AS2 Gene

Transcripts for WDFY3-AS2 Gene

Unigene Clusters for WDFY3-AS2 Gene

WDFY3 antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for WDFY3-AS2 Gene

No ASD Table

Relevant External Links for WDFY3-AS2 Gene

GeneLoc Exon Structure for
WDFY3-AS2
ECgene alternative splicing isoforms for
WDFY3-AS2

Expression for WDFY3-AS2 Gene

mRNA expression in normal human tissues for WDFY3-AS2 Gene

SOURCE GeneReport for Unigene cluster for WDFY3-AS2 Gene Hs.720920

genes like me logo Genes that share expressions with WDFY3-AS2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for WDFY3-AS2 Gene

Orthologs for WDFY3-AS2 Gene

Evolution for WDFY3-AS2 Gene

ENSEMBL:
Gene Tree for WDFY3-AS2 (if available)
TreeFam:
Gene Tree for WDFY3-AS2 (if available)

No data available for Orthologs for WDFY3-AS2 Gene

Paralogs for WDFY3-AS2 Gene

No data available for Paralogs for WDFY3-AS2 Gene

Variants for WDFY3-AS2 Gene

Sequence variations from dbSNP and Humsavar for WDFY3-AS2 Gene

SNP ID Clin Chr 04 pos Sequence Context AA Info Type MAF
rs4383611 -- 84,996,655(+) ATACT(C/T)AAAGG intron-variant
rs4408955 -- 84,986,608(+) acatg(A/C)ttcag intron-variant
rs4533765 -- 84,994,417(+) AACAA(C/T)TGAGT intron-variant
rs4590017 -- 84,977,588(+) GGAAA(A/G)AGGCT intron-variant
rs5859959 -- 84,999,820(+) AAAAA(-/A)TGGAG intron-variant

Structural Variations from Database of Genomic Variants (DGV) for WDFY3-AS2 Gene

Variant ID Type Subtype PubMed ID
nsv519588 CNV Gain 19592680
nsv879516 CNV Loss 21882294

Relevant External Links for WDFY3-AS2 Gene

HapMap Linkage Disequilibrium report
WDFY3-AS2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for WDFY3-AS2 Gene

Disorders for WDFY3-AS2 Gene

No disorders were found for WDFY3-AS2 Gene.

No data available for UniProtKB/Swiss-Prot for WDFY3-AS2 Gene

Publications for WDFY3-AS2 Gene

  1. Breakpoint analysis of the pericentric inversion distinguishing human chromosome 4 from the homologous chromosome in the chimpanzee (Pan troglodytes). (PMID: 15580561) Kehrer-Sawatzki H. … Hameister H. (Hum. Mutat. 2005) 2 3
  2. NotI flanking sequences: a tool for gene discovery and verification of the human genome. (PMID: 12136098) Kutsenko A.S. … Zabarovsky E.R. (Nucleic Acids Res. 2002) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3

Products for WDFY3-AS2 Gene

  • DNA Methylation CpG Assay Predesigned for Pyrosequencing in human,mouse,rat
  • QIAGEN qRT-PCR Assays for microRNAs that regulate WDFY3-AS2
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for WDFY3-AS2
    • Block miRNA regulation of WDFY3-AS2 using miScript Target Protectors

    Sources for WDFY3-AS2 Gene

    Back to Top

    Content