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Aliases for WASIR2 Gene

Subcategory (RNA class) for WASIR2 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for WASIR2 Gene

  • WASH And IL9R Antisense RNA 2 2 3 5
  • WASH And IL9R Antisense RNA 2 (Non-Protein Coding) 2 3
  • Non-Protein Coding RNA 286A 2 3
  • NCRNA00286A 3

External Ids for WASIR2 Gene

Previous HGNC Symbols for WASIR2 Gene

  • NCRNA00286A

Previous GeneCards Identifiers for WASIR2 Gene

  • GC16P000079
  • GC16P000082
  • GC16P000085
  • GC16P000089
  • GC16P000094
  • GC16P000099

Summaries for WASIR2 Gene

GeneCards Summary for WASIR2 Gene

WASIR2 (WASH And IL9R Antisense RNA 2) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WASIR2 Gene

Genomics for WASIR2 Gene

Regulatory Elements for WASIR2 Gene

Enhancers for WASIR2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH16G000640 1.4 ENCODE dbSUPER 12.2 +622.6 622646 10.1 MLX CREB3L1 AGO1 DMAP1 FEZF1 YY1 SLC30A9 ZNF143 SP3 NFYC LOC105371038 IFT140 WFIKKN1 ENSG00000262528 JMJD8 WASH4P RHBDL1 ENSG00000261505 ENSG00000269482 ENSG00000260051
GH16G000689 1.2 ENCODE 12.2 +667.3 667332 1.7 CREB3L1 MLX AGO1 ZFP64 FEZF1 DMAP1 YY1 SLC30A9 ZNF143 MCM3 WFIKKN1 ENSG00000259840 PRR25 WASIR2 LOC105371038 WDR24 ENSG00000261659
GH16G000118 1 dbSUPER 12.3 +97.3 97250 2.8 ATF1 ARNT ARID4B SIN3A TCF12 ZNF766 GATA2 NCOA1 MXD4 MIER2 NPRL3 ENSG00000259840 PRR25 WASIR2 ENSG00000228779 GC16P000124
GH16G000033 1.5 FANTOM5 Ensembl ENCODE 0.4 +12.1 12108 2.4 HDGF PTBP1 PKNOX1 AGO1 ZSCAN4 SIN3A KLF17 BMI1 ZNF2 EGR1 IL9RP3 SNRNP25 ENSG00000228779 ENSG00000262528 LOC105371184 LUC7L HBA1 HBA2 HBQ1 AXIN1
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around WASIR2 on UCSC Golden Path with GeneCards custom track

Promoters for WASIR2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000082108 190 600 HDGF SIN3A ZNF48 ZNF2 ZNF143 KLF7 FOS ZNF263 SP3 SP5

Genomic Location for WASIR2 Gene

Chromosome:
16
Start:
22,910 bp from pter
End:
25,123 bp from pter
Size:
2,214 bases
Orientation:
Plus strand

Genomic View for WASIR2 Gene

Genes around WASIR2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WASIR2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WASIR2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WASIR2 Gene

Proteins for WASIR2 Gene

Post-translational modifications for WASIR2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASIR2 Gene

Domains & Families for WASIR2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WASIR2 Gene

Function for WASIR2 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WASIR2 Gene

Localization for WASIR2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for WASIR2 Gene

Pathways & Interactions for WASIR2 Gene

SuperPathways for WASIR2 Gene

No Data Available

Interacting Proteins for WASIR2 Gene

Gene Ontology (GO) - Biological Process for WASIR2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WASIR2 Gene

Drugs & Compounds for WASIR2 Gene

No Compound Related Data Available

Transcripts for WASIR2 Gene

mRNA/cDNA for WASIR2 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WASIR2 Gene

WASH and IL9R antisense RNA 2:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for WASIR2 Gene

No ASD Table

Relevant External Links for WASIR2 Gene

GeneLoc Exon Structure for
WASIR2
ECgene alternative splicing isoforms for
WASIR2

Expression for WASIR2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WASIR2 Gene

mRNA differential expression in normal tissues according to GTEx for WASIR2 Gene

This gene is overexpressed in Brain - Cerebellar Hemisphere (x5.4), Brain - Cerebellum (x5.0), and Ovary (x4.2).

NURSA nuclear receptor signaling pathways regulating expression of WASIR2 Gene:

WASIR2

SOURCE GeneReport for Unigene cluster for WASIR2 Gene:

Hs.498519
genes like me logo Genes that share expression patterns with WASIR2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WASIR2 Gene

Orthologs for WASIR2 Gene

Evolution for WASIR2 Gene

ENSEMBL:
Gene Tree for WASIR2 (if available)
TreeFam:
Gene Tree for WASIR2 (if available)

No data available for Orthologs for WASIR2 Gene

Paralogs for WASIR2 Gene

No data available for Paralogs for WASIR2 Gene

Variants for WASIR2 Gene

Sequence variations from dbSNP and Humsavar for WASIR2 Gene

SNP ID Clin Chr 16 pos Sequence Context AA Info Type
rs1000860396 -- 21,136(+) TCGGC(G/T)CAAGC upstream-variant-2KB
rs1000863218 -- 20,981(+) CTGGT(A/G)TGCGG upstream-variant-2KB
rs1001178363 -- 22,135(+) GGAGG(A/C)TCATT upstream-variant-2KB
rs1001250401 -- 22,395(+) GAAAA(G/T)AAAGA upstream-variant-2KB
rs1002851944 -- 24,041(+) TCGAT(C/G/T)GGGGC intron-variant

Relevant External Links for WASIR2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WASIR2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WASIR2 Gene

Disorders for WASIR2 Gene

Relevant External Links for WASIR2

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
WASIR2

No disorders were found for WASIR2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WASIR2 Gene

Publications for WASIR2 Gene

  1. Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. (PMID: 11157797) Daniels R.J. … Higgs D.R. (Hum. Mol. Genet. 2001) 2 3 64

Products for WASIR2 Gene

Sources for WASIR2 Gene

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