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Aliases for WASHC5-AS1 Gene

Subcategory (RNA class) for WASHC5-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for WASHC5-AS1 Gene

  • WASHC5 Antisense RNA 1 2 3 5
  • KIAA0196 Antisense RNA 1 (Non-Protein Coding) 2
  • KIAA0196 Antisense RNA 1 2
  • KIAA0196-AS1 3

External Ids for WASHC5-AS1 Gene

Previous HGNC Symbols for WASHC5-AS1 Gene

  • KIAA0196-AS1

Previous GeneCards Identifiers for WASHC5-AS1 Gene

  • GC08U902665

Summaries for WASHC5-AS1 Gene

GeneCards Summary for WASHC5-AS1 Gene

WASHC5-AS1 (WASHC5 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

Additional gene information for WASHC5-AS1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WASHC5-AS1 Gene

Genomics for WASHC5-AS1 Gene

Regulatory Elements for WASHC5-AS1 Gene

Enhancers for WASHC5-AS1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH08H125696 2 FANTOM5 Ensembl ENCODE dbSUPER 21.6 +658.7 658683 6 PKNOX1 ZFP64 ARID4B SIN3A YY1 GTF3C2 ZNF207 ZNF143 FOS ATF7 WASHC5-AS1 WASHC5 NSMCE2 TRIB1 GC08M126263 LOC105375747
GH08H124194 1.9 FANTOM5 Ensembl ENCODE dbSUPER 21.5 -842.3 -842335 8 HDGF PKNOX1 ARNT SIN3A FEZF1 YBX1 ZNF2 ZBTB7B ZNF766 ZNF207 TRMT12 WASHC5 NSMCE2 TMEM65 FAM91A1 RNF139-AS1 WASHC5-AS1 ZNF572 ENSG00000253106 RNF139
GH08H125428 1.8 FANTOM5 ENCODE dbSUPER 22.5 +391.9 391939 8 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF143 SP3 NFYC ZC3H11A MEF2D TRIB1 WASHC5 TRMT12 WASHC5-AS1 NSMCE2 ENSG00000253106 GC08P125444
GH08H124685 1.5 Ensembl ENCODE dbSUPER 22.9 -352.7 -352666 5 HDGF PKNOX1 FOXA2 ZFP64 ARID4B YBX1 FEZF1 ETS1 ZNF766 GATA2 WASHC5-AS1 FAM91A1 ZNF572 TRMT12 MTSS1 WASHC5 RNF139 TATDN1 NDUFB9 GC08P124718
GH08H124449 1.1 ENCODE 23.6 -589.8 -589761 2 HDGF PKNOX1 ARID4B SIN3A ZNF2 ZBTB7B YY1 ZNF766 ZNF143 ZNF207 TRMT12 ENSG00000253106 WASHC5-AS1 NSMCE2 FAM91A1 RNF139 WASHC5 RNF139-AS1 LOC105375740 GC08M124446
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around WASHC5-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for WASHC5-AS1 Gene

Chromosome:
8
Start:
125,040,684 bp from pter
End:
125,044,989 bp from pter
Size:
4,306 bases
Orientation:
Plus strand

Genomic View for WASHC5-AS1 Gene

Genes around WASHC5-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WASHC5-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WASHC5-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

No data available for RefSeq DNA sequence for WASHC5-AS1 Gene

Proteins for WASHC5-AS1 Gene

Post-translational modifications for WASHC5-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASHC5-AS1 Gene

Domains & Families for WASHC5-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WASHC5-AS1 Gene

Function for WASHC5-AS1 Gene

Phenotypes From GWAS Catalog for WASHC5-AS1 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for WASHC5-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WASHC5-AS1 Gene

Localization for WASHC5-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WASHC5-AS1 Gene

Pathways & Interactions for WASHC5-AS1 Gene

SuperPathways for WASHC5-AS1 Gene

No Data Available

Interacting Proteins for WASHC5-AS1 Gene

Gene Ontology (GO) - Biological Process for WASHC5-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WASHC5-AS1 Gene

Drugs & Compounds for WASHC5-AS1 Gene

No Compound Related Data Available

Transcripts for WASHC5-AS1 Gene

mRNA/cDNA for WASHC5-AS1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for WASHC5-AS1
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for WASHC5-AS1 Gene

No ASD Table

Relevant External Links for WASHC5-AS1 Gene

GeneLoc Exon Structure for
WASHC5-AS1
ECgene alternative splicing isoforms for
WASHC5-AS1

Expression for WASHC5-AS1 Gene

No Expression Related Data Available

No data available for mRNA expression in normal human tissues , mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WASHC5-AS1 Gene

Orthologs for WASHC5-AS1 Gene

Evolution for WASHC5-AS1 Gene

ENSEMBL:
Gene Tree for WASHC5-AS1 (if available)
TreeFam:
Gene Tree for WASHC5-AS1 (if available)

No data available for Orthologs for WASHC5-AS1 Gene

Paralogs for WASHC5-AS1 Gene

No data available for Paralogs for WASHC5-AS1 Gene

Variants for WASHC5-AS1 Gene

Relevant External Links for WASHC5-AS1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WASHC5-AS1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WASHC5-AS1 Gene

Disorders for WASHC5-AS1 Gene

No disorders were found for WASHC5-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for WASHC5-AS1 Gene

Publications for WASHC5-AS1 Gene

  1. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K … Sugano S (Genome research 2006) 3 60

Products for WASHC5-AS1 Gene

Sources for WASHC5-AS1 Gene

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