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Aliases for WASH7P Gene

Aliases for WASH7P Gene

  • WAS Protein Family Homolog 7 Pseudogene 2 3
  • Family With Sequence Similarity 39, Member F 3
  • WAS Protein Family Homolog 5 Pseudogene 3
  • Family With Sequence Similarity 39 2
  • Member F 2
  • FAM39F 3
  • WASH5P 3

External Ids for WASH7P Gene

Summaries for WASH7P Gene

GeneCards Summary for WASH7P Gene

WASH7P (WAS Protein Family Homolog 7 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WASH7P Gene

Genomics for WASH7P Gene

Genomic Location for WASH7P Gene

Start:
14,362 bp from pter
End:
29,570 bp from pter
Size:
15,209 bases
Orientation:
Minus strand

Genomic View for WASH7P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for WASH7P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WASH7P Gene

No data available for Regulatory Elements for WASH7P Gene

Proteins for WASH7P Gene

Post-translational modifications for WASH7P Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASH7P Gene

Domains for WASH7P Gene

Gene Families for WASH7P Gene

HGNC:
  • WASH :WAS protein homologs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WASH7P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WASH7P Gene

Function for WASH7P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for WASH7P Gene

Localization for WASH7P Gene

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for WASH7P Gene COMPARTMENTS Subcellular localization image for WASH7P gene
Compartment Confidence
cytoskeleton 2
cytosol 2
nucleus 2
golgi apparatus 1

No data available for Subcellular locations from UniProtKB/Swiss-Prot and Gene Ontology (GO) - Cellular Components for WASH7P Gene

Pathways for WASH7P Gene

SuperPathways for WASH7P Gene

No Data Available

Interacting Proteins for WASH7P Gene

Gene Ontology (GO) - Biological Process for WASH7P Gene

None

No data available for Pathways by source for WASH7P Gene

Transcripts for WASH7P Gene

mRNA/cDNA for WASH7P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for WASH7P

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for WASH7P Gene

No ASD Table

Relevant External Links for WASH7P Gene

GeneLoc Exon Structure for
WASH7P
ECgene alternative splicing isoforms for
WASH7P

Expression for WASH7P Gene

mRNA expression in normal human tissues for WASH7P Gene

genes like me logo Genes that share expressions with WASH7P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for WASH7P Gene

Orthologs for WASH7P Gene

Evolution for WASH7P Gene

ENSEMBL:
Gene Tree for WASH7P (if available)
TreeFam:
Gene Tree for WASH7P (if available)

No data available for Orthologs for WASH7P Gene

Paralogs for WASH7P Gene

No data available for Paralogs for WASH7P Gene

Variants for WASH7P Gene

Sequence variations from dbSNP and Humsavar for WASH7P Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type MAF
rs376349 -- 26,999(-) CACCT(C/T)CCTGG intron-variant
rs394478 -- 19,600(+) GACCC(A/T)TTAGG intron-variant
rs452623 -- 24,832(-) TGCCC(C/T)TCATC nc-transcript-variant
rs543231 -- 25,774(-) GGGCA(C/T)AGTGC intron-variant
rs2691315 -- 15,820(-) AGAAG(A/C)AGCAG nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for WASH7P Gene

Variant ID Type Subtype PubMed ID
nsv7879 CNV Gain+Loss 18304495
dgv2n71 CNV Gain 21882294
dgv1e1 CNV Complex 17122850
nsv428112 CNV Gain 18775914
dgv3e1 CNV Complex 17122850
esv27265 CNV Gain+Loss 19812545
nsv469759 CNV Loss 16826518
nsv471591 CNV Loss 15918152

Relevant External Links for WASH7P Gene

HapMap Linkage Disequilibrium report
WASH7P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for WASH7P Gene

Disorders for WASH7P Gene

(1) University of Copenhagen DISEASES for WASH7P Gene

genes like me logo Genes that share disorders with WASH7P: view

No data available for UniProtKB/Swiss-Prot for WASH7P Gene

Publications for WASH7P Gene

  1. Human subtelomeric WASH genes encode a new subclass of the WASP family. (PMID: 18159949) Linardopoulou E.V. … Trask B.J. (PLoS Genet. 2007) 2 3
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  3. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  4. Diversification of transcriptional modulation: large-scale identification and characterization of putative alternative promoters of human genes. (PMID: 16344560) Kimura K. … Sugano S. (Genome Res. 2006) 3

Products for WASH7P Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate WASH7P
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for WASH7P
    • Block miRNA regulation of WASH7P using miScript Target Protectors

    Sources for WASH7P Gene

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