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Aliases for WASH5P Gene

Aliases for WASH5P Gene

  • WAS Protein Family Homolog 5 Pseudogene 2 3 5

External Ids for WASH5P Gene

Previous GeneCards Identifiers for WASH5P Gene

  • GC01U901690
  • GC01M000001

Summaries for WASH5P Gene

GeneCards Summary for WASH5P Gene

WASH5P (WAS Protein Family Homolog 5 Pseudogene) is a Pseudogene.

Additional gene information for WASH5P Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WASH5P Gene

Genomics for WASH5P Gene

GeneHancer (GH) Regulatory Elements for WASH5P Gene

Promoters and enhancers for WASH5P Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH19I000070 Promoter 0.5 Ensembl 550.8 +0.9 925 1.4 ENSG00000282798 ENSG00000282807 LOC105376912 MIR1302-11 WASH5P
GH19I000288 Promoter/Enhancer 2.3 EPDnew FANTOM5 Ensembl ENCODE dbSUPER 5.4 -218.5 -218477 2.9 SREBF2 NEUROD1 SIN3A RCOR1 FOS SMARCC1 USF2 CEBPB SMARCB1 ZNF217 PLPP2 WASH5P GZMM MISP RNF126 C2CD4C VN2R11P
GH19I000280 Enhancer 0.5 dbSUPER 9.7 -209.0 -209000 0.8 OSR2 NR2C1 PRDM10 ZIC2 EZH2 GC19P000280 VN2R11P THEG C2CD4C WASH5P PLPP2
GH19I000063 Enhancer 0.2 Ensembl 0.4 +8.5 8525 0.2 ENSG00000282542 WASH5P
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around WASH5P on UCSC Golden Path with GeneCards custom track

Top Transcription factor binding sites by QIAGEN in the WASH5P gene promoter:

Genomic Locations for WASH5P Gene

Genomic Locations for WASH5P Gene
chr19:60,951-71,626
(GRCh38/hg38)
Size:
10,676 bases
Orientation:
Minus strand
chr19:60,105-71,626
(GRCh37/hg19)

Genomic View for WASH5P Gene

Genes around WASH5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WASH5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WASH5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WASH5P Gene

Proteins for WASH5P Gene

Post-translational modifications for WASH5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASH5P Gene

Domains & Families for WASH5P Gene

Gene Families for WASH5P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WASH5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WASH5P Gene

Function for WASH5P Gene

Phenotypes for WASH5P Gene

GenomeRNAi human phenotypes for WASH5P:
genes like me logo Genes that share phenotypes with WASH5P: view

Animal Model Products

Inhibitory RNA Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WASH5P Gene

Localization for WASH5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WASH5P Gene

Pathways & Interactions for WASH5P Gene

SuperPathways for WASH5P Gene

No Data Available

Interacting Proteins for WASH5P Gene

Gene Ontology (GO) - Biological Process for WASH5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WASH5P Gene

Drugs & Compounds for WASH5P Gene

No Compound Related Data Available

Transcripts for WASH5P Gene

mRNA/cDNA for WASH5P Gene

(1) Additional mRNA sequences :
(10) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WASH5P Gene

WAS protein family homolog 5 pseudogene:
Representative Sequences:

Inhibitory RNA Products

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for WASH5P Gene

No ASD Table

Relevant External Links for WASH5P Gene

GeneLoc Exon Structure for
WASH5P
ECgene alternative splicing isoforms for
WASH5P

Expression for WASH5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WASH5P Gene

NURSA nuclear receptor signaling pathways regulating expression of WASH5P Gene:

WASH5P

SOURCE GeneReport for Unigene cluster for WASH5P Gene:

Hs.572592
genes like me logo Genes that share expression patterns with WASH5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WASH5P Gene

Orthologs for WASH5P Gene

Evolution for WASH5P Gene

ENSEMBL:
Gene Tree for WASH5P (if available)
TreeFam:
Gene Tree for WASH5P (if available)

No data available for Orthologs for WASH5P Gene

Paralogs for WASH5P Gene

No data available for Paralogs for WASH5P Gene

Variants for WASH5P Gene

Sequence variations from dbSNP and Humsavar for WASH5P Gene

SNP ID Clin Chr 19 pos Variation AA Info Type
rs1001640151 -- 72,793(-) T/C upstream_transcript_variant
rs1006508662 -- 63,651(-) G/A intron_variant
rs1011744864 -- 71,312(-) C/T upstream_transcript_variant
rs1019273732 -- 64,787(-) T/C intron_variant
rs1021717627 -- 68,680(-) G/T intron_variant

Structural Variations from Database of Genomic Variants (DGV) for WASH5P Gene

Variant ID Type Subtype PubMed ID
dgv1664n106 CNV duplication 24896259
dgv1956e59 CNV duplication 20981092
dgv1957e59 CNV duplication 20981092
esv22059 CNV gain+loss 19812545
esv994482 CNV gain 20482838
nsv1076458 CNV duplication 25765185
nsv1077852 CNV duplication 25765185
nsv1148144 CNV duplication 26484159
nsv471520 CNV gain 19718026
nsv820962 CNV duplication 20802225
nsv960766 CNV duplication 23825009
nsv960767 CNV duplication 23825009
nsv961258 CNV duplication 23825009
nsv963087 CNV duplication 23825009
nsv963088 CNV duplication 23825009
nsv9651 CNV gain+loss 18304495

Additional Variant Information for WASH5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WASH5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for WASH5P Gene

Disorders for WASH5P Gene

Additional Disease Information for WASH5P

No disorders were found for WASH5P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for WASH5P Gene

Publications for WASH5P Gene

  1. Human subtelomeric WASH genes encode a new subclass of the WASP family. (PMID: 18159949) Linardopoulou EV … Trask BJ (PLoS genetics 2007) 2 58
  2. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T … Sugano S (Nature genetics 2004) 3 58

Products for WASH5P Gene

Sources for WASH5P Gene

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