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Aliases for WASH5P Gene

Aliases for WASH5P Gene

  • WAS Protein Family Homolog 5 Pseudogene 2 3

External Ids for WASH5P Gene

Previous GeneCards Identifiers for WASH5P Gene

  • GC01U901690
  • GC01M000001

Summaries for WASH5P Gene

GeneCards Summary for WASH5P Gene

WASH5P (WAS Protein Family Homolog 5 Pseudogene) is a Pseudogene.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WASH5P Gene

Genomics for WASH5P Gene

Regulatory Elements for WASH5P Gene

Genomic Location for WASH5P Gene

Start:
60,105 bp from pter
End:
71,626 bp from pter
Size:
11,522 bases
Orientation:
Minus strand

Genomic View for WASH5P Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for WASH5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for WASH5P Gene

Proteins for WASH5P Gene

Post-translational modifications for WASH5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASH5P Gene

Domains for WASH5P Gene

Gene Families for WASH5P Gene

HGNC:
  • WASH :WAS protein homologs

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WASH5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WASH5P Gene

Function for WASH5P Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for WASH5P Gene

Localization for WASH5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for WASH5P Gene

Pathways for WASH5P Gene

SuperPathways for WASH5P Gene

No Data Available

Interacting Proteins for WASH5P Gene

Gene Ontology (GO) - Biological Process for WASH5P Gene

None

No data available for Pathways by source for WASH5P Gene

Transcripts for WASH5P Gene

mRNA/cDNA for WASH5P Gene

(1) Additional mRNA sequences :
(15) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for WASH5P Gene

WAS protein family homolog 5 pseudogene:
Representative Sequences:

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for WASH5P

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for WASH5P Gene

No ASD Table

Relevant External Links for WASH5P Gene

GeneLoc Exon Structure for
WASH5P
ECgene alternative splicing isoforms for
WASH5P

Expression for WASH5P Gene

mRNA expression in normal human tissues for WASH5P Gene

SOURCE GeneReport for Unigene cluster for WASH5P Gene Hs.572592

genes like me logo Genes that share expressions with WASH5P: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Expression partners for WASH5P Gene

Orthologs for WASH5P Gene

Evolution for WASH5P Gene

ENSEMBL:
Gene Tree for WASH5P (if available)
TreeFam:
Gene Tree for WASH5P (if available)

No data available for Orthologs for WASH5P Gene

Paralogs for WASH5P Gene

Pseudogenes.org Pseudogenes for WASH5P Gene

genes like me logo Genes that share paralogs with WASH5P: view

No data available for Paralogs for WASH5P Gene

Variants for WASH5P Gene

Sequence variations from dbSNP and Humsavar for WASH5P Gene

SNP ID Clin Chr 19 pos Sequence Context AA Info Type MAF
rs806730 -- 72,768(-) GAGGG(A/G)AAAAT upstream-variant-2KB
rs2418684 -- 72,775(-) GTGGA(A/G)TGAGG upstream-variant-2KB
rs2870120 -- 72,638(+) tcacc(A/G)ggaac upstream-variant-2KB
rs3982686 -- 62,208(-) CTTCT(A/G)TATTT intron-variant
rs7351082 -- 60,950(+) AGGAA(A/G)GGCAG downstream-variant-500B

Structural Variations from Database of Genomic Variants (DGV) for WASH5P Gene

Variant ID Type Subtype PubMed ID
nsv9651 CNV Gain+Loss 18304495
nsv910070 CNV Gain 21882294
nsv471520 CNV Duplication 19718026
esv994482 CNV Gain 20482838
nsv820962 CNV Duplication 20802225
esv22059 CNV Gain+Loss 19812545

Relevant External Links for WASH5P Gene

HapMap Linkage Disequilibrium report
WASH5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for WASH5P Gene

Disorders for WASH5P Gene

No disorders were found for WASH5P Gene.

No data available for MalaCards , OMIM , UniProtKB/Swiss-Prot , University of Copenhagen DISEASES , Novoseek inferred disease relationships , Genatlas and External Links for WASH5P Gene

Publications for WASH5P Gene

  1. Complete sequencing and characterization of 21,243 full-length human cDNAs. (PMID: 14702039) Ota T. … Sugano S. (Nat. Genet. 2004) 3
  2. Human subtelomeric WASH genes encode a new subclass of the WASP family. (PMID: 18159949) Linardopoulou E.V. … Trask B.J. (PLoS Genet. 2007) 2

Products for WASH5P Gene

Sources for WASH5P Gene

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