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Aliases for WASF5P Gene

Aliases for WASF5P Gene

  • WAS Protein Family Member 5, Pseudogene 2 3 5
  • WAS Protein Family, Member 5, Pseudogene 2

External Ids for WASF5P Gene

Previous GeneCards Identifiers for WASF5P Gene

  • GC00U914415
  • GC06U900680
  • GC06M031363
  • GC06M031256
  • GC06M031055
  • GC06Mj31247
  • GC06M031262
  • GC06M031271
  • GC06M031304
  • GC06M031360

Summaries for WASF5P Gene

Entrez Gene Summary for WASF5P Gene

  • This gene is a pseudogene belonging to the family of genes encoding Wiskott-Aldrich syndrome (WAS) proteins, which are involved in the transmission of signals to the actin cytoskeleton. Wiskott-Aldrich syndrome is a disease of the immune system. This pseudogene, which is apparently not transcribed, resembles the gene encoding the WAS protein family member 3, which is located on chromosome 13. [provided by RefSeq, Jul 2008]

GeneCards Summary for WASF5P Gene

WASF5P (WAS Protein Family Member 5, Pseudogene) is a Pseudogene. Diseases associated with WASF5P include Wiskott-Aldrich Syndrome.

Additional gene information for WASF5P Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for WASF5P Gene

Genomics for WASF5P Gene

Regulatory Elements for WASF5P Gene

Enhancers for WASF5P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH06H031307 1.2 FANTOM5 Ensembl ENCODE 9 -19.3 -19293 1 MAZ PKNOX1 ZNF687 HCFC1 DDX20 EBF1 ZNF217 PBX2 NFYB CREB1 HLA-C PSORS1C3 GPANK1 BAG6 PSORS1C2 CCHCR1 MDC1 TRIM39 VARS DHX16
GH06H031266 0.7 ENCODE dbSUPER 9.5 +22.3 22286 0 POLR2A BACH1 HLA-C WASF5P POU5F1 PIR41455 ENSG00000255899
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around WASF5P on UCSC Golden Path with GeneCards custom track

Genomic Location for WASF5P Gene

Chromosome:
6
Start:
31,287,385 bp from pter
End:
31,289,164 bp from pter
Size:
1,780 bases
Orientation:
Minus strand

Genomic View for WASF5P Gene

Genes around WASF5P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
WASF5P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for WASF5P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

Proteins for WASF5P Gene

Post-translational modifications for WASF5P Gene

No Post-translational modifications

No data available for DME Specific Peptides for WASF5P Gene

Domains & Families for WASF5P Gene

Gene Families for WASF5P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with WASF5P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for WASF5P Gene

Function for WASF5P Gene

Phenotypes From GWAS Catalog for WASF5P Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for WASF5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for WASF5P Gene

Localization for WASF5P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for WASF5P Gene

Pathways & Interactions for WASF5P Gene

SuperPathways for WASF5P Gene

No Data Available

Interacting Proteins for WASF5P Gene

Gene Ontology (GO) - Biological Process for WASF5P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for WASF5P Gene

Drugs & Compounds for WASF5P Gene

No Compound Related Data Available

Transcripts for WASF5P Gene

mRNA/cDNA for WASF5P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for WASF5P
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for WASF5P Gene

No ASD Table

Relevant External Links for WASF5P Gene

GeneLoc Exon Structure for
WASF5P
ECgene alternative splicing isoforms for
WASF5P

Expression for WASF5P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for WASF5P Gene

mRNA differential expression in normal tissues according to GTEx for WASF5P Gene

This gene is overexpressed in Pancreas (x11.0), Brain - Cerebellum (x6.2), Brain - Cerebellar Hemisphere (x5.8), and Prostate (x4.9).

NURSA nuclear receptor signaling pathways regulating expression of WASF5P Gene:

WASF5P
genes like me logo Genes that share expression patterns with WASF5P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for WASF5P Gene

Orthologs for WASF5P Gene

Evolution for WASF5P Gene

ENSEMBL:
Gene Tree for WASF5P (if available)
TreeFam:
Gene Tree for WASF5P (if available)

No data available for Orthologs for WASF5P Gene

Paralogs for WASF5P Gene

No data available for Paralogs for WASF5P Gene

Variants for WASF5P Gene

Relevant External Links for WASF5P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
WASF5P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for WASF5P Gene

Disorders for WASF5P Gene

MalaCards: The human disease database

(1) MalaCards diseases for WASF5P Gene - From: GeneCards

Disorder Aliases PubMed IDs
wiskott-aldrich syndrome
  • wiskott syndrome
- elite association - COSMIC cancer census association via MalaCards

Relevant External Links for WASF5P

Genetic Association Database (GAD)
WASF5P
genes like me logo Genes that share disorders with WASF5P: view

No data available for UniProtKB/Swiss-Prot and Genatlas for WASF5P Gene

Publications for WASF5P Gene

  1. Genomewide association study of an AIDS-nonprogression cohort emphasizes the role played by HLA genes (ANRS Genomewide Association Study 02). (PMID: 19115949) Limou S … ANRS Genomic Group (The Journal of infectious diseases 2009) 3 45 60
  2. Common genetic variation and the control of HIV-1 in humans. (PMID: 20041166) Fellay J … NIAID Center for HIV/AIDS Vaccine Immunology (CHAVI) (PLoS genetics 2009) 3 45 60
  3. Biological, clinical and population relevance of 95 loci for blood lipids. (PMID: 20686565) Teslovich TM … Kathiresan S (Nature 2010) 45 60
  4. The major genetic determinants of HIV-1 control affect HLA class I peptide presentation. (PMID: 21051598) International HIV Controllers Study … Zhao M (Science (New York, N.Y.) 2010) 45 60
  5. Genome-wide association study identifies variants in the MHC class I, IL10, and IL23R-IL12RB2 regions associated with Behçet's disease. (PMID: 20622878) Remmers EF … Gül A (Nature genetics 2010) 45 60

Products for WASF5P Gene

Sources for WASF5P Gene

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