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Aliases for VTI1BP4 Gene

Aliases for VTI1BP4 Gene

  • Vesicle Transport Through Interaction With T-SNAREs 1B Pseudogene 4 2 3 5
  • Vesicle Transport Through Interaction With T-SNAREs Homolog 1B (Yeast) Pseudogene 4 2

External Ids for VTI1BP4 Gene

Previous GeneCards Identifiers for VTI1BP4 Gene

  • GC09P131415

Summaries for VTI1BP4 Gene

GeneCards Summary for VTI1BP4 Gene

VTI1BP4 (Vesicle Transport Through Interaction With T-SNAREs 1B Pseudogene 4) is a Pseudogene.

Additional gene information for VTI1BP4 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VTI1BP4 Gene

Genomics for VTI1BP4 Gene

GeneHancer (GH) Regulatory Elements for VTI1BP4 Gene

Promoters and enhancers for VTI1BP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH09I128655 Promoter/Enhancer 2.1 EPDnew Ensembl ENCODE 0.4 +5.7 5684 2.3 MLX FEZF1 DMAP1 YY1 SLC30A9 ZNF213 E2F8 ZNF143 SP3 NFYC WDR34 NAIF1 NUP188 GLE1 URM1 CERCAM GC09M128631 VTI1BP4
GH09I128633 Enhancer 1.4 Ensembl ENCODE dbSUPER 0.4 -14.9 -14891 4.7 PKNOX1 ARID4B NEUROD1 SIN3A FEZF1 DMAP1 ZNF2 ZBTB7B YY1 SLC30A9 PKN3 ODF2 LOC100129352 LOC100506100 ZDHHC12 LOC101929270 RNU7-171P LRRC8A KYAT1 TBC1D13
GH09I128648 Enhancer 0.6 ENCODE 0.8 -2.5 -2541 0.2 BCOR SMARCA5 CTCF ZNF654 ZMYM3 REST ZNF48 RAD21 ZNF121 ZFP69B URM1 VTI1BP4 WDR34 GC09M128631 ENSG00000280758
GH09I128642 Enhancer 0.8 ENCODE 0.4 -7.5 -7529 1.4 HDGF CLOCK RB1 NFIB YBX1 ZNF121 EGR1 ZNF207 ATF7 IKZF2 PKN3 LOC100506100 ZDHHC12 LOC101929270 SPTAN1 KYAT1 LRRC8A CERCAM VTI1BP4 WDR34
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around VTI1BP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for VTI1BP4 Gene

Genomic Locations for VTI1BP4 Gene
chr9:128,650,998-128,652,150
(GRCh38/hg38)
Size:
1,153 bases
Orientation:
Plus strand
chr9:131,413,277-131,414,429
(GRCh37/hg19)

Genomic View for VTI1BP4 Gene

Genes around VTI1BP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VTI1BP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VTI1BP4 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VTI1BP4 Gene

Proteins for VTI1BP4 Gene

Post-translational modifications for VTI1BP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VTI1BP4 Gene

Domains & Families for VTI1BP4 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VTI1BP4 Gene

Function for VTI1BP4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VTI1BP4 Gene

Localization for VTI1BP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VTI1BP4 Gene

Pathways & Interactions for VTI1BP4 Gene

SuperPathways for VTI1BP4 Gene

No Data Available

Interacting Proteins for VTI1BP4 Gene

Gene Ontology (GO) - Biological Process for VTI1BP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VTI1BP4 Gene

Drugs & Compounds for VTI1BP4 Gene

No Compound Related Data Available

Transcripts for VTI1BP4 Gene

mRNA/cDNA for VTI1BP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for VTI1BP4 Gene

No ASD Table

Relevant External Links for VTI1BP4 Gene

GeneLoc Exon Structure for
VTI1BP4
ECgene alternative splicing isoforms for
VTI1BP4

Expression for VTI1BP4 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for VTI1BP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of VTI1BP4 Gene:

VTI1BP4
genes like me logo Genes that share expression patterns with VTI1BP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VTI1BP4 Gene

Orthologs for VTI1BP4 Gene

Evolution for VTI1BP4 Gene

ENSEMBL:
Gene Tree for VTI1BP4 (if available)
TreeFam:
Gene Tree for VTI1BP4 (if available)

No data available for Orthologs for VTI1BP4 Gene

Paralogs for VTI1BP4 Gene

No data available for Paralogs for VTI1BP4 Gene

Variants for VTI1BP4 Gene

Additional Variant Information for VTI1BP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VTI1BP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VTI1BP4 Gene

Disorders for VTI1BP4 Gene

No disorders were found for VTI1BP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VTI1BP4 Gene

Publications for VTI1BP4 Gene

No publications were found for VTI1BP4 Gene.

Products for VTI1BP4 Gene

Sources for VTI1BP4 Gene

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