Free for academic non-profit institutions. Other users need a Commercial license

Aliases for VTI1BP3 Gene

Aliases for VTI1BP3 Gene

  • Vesicle Transport Through Interaction With T-SNAREs 1B Pseudogene 3 2 3 5
  • Vesicle Transport Through Interaction With T-SNAREs Homolog 1B (Yeast) Pseudogene 3 2

External Ids for VTI1BP3 Gene

Previous GeneCards Identifiers for VTI1BP3 Gene

  • GC12P053526

Summaries for VTI1BP3 Gene

GeneCards Summary for VTI1BP3 Gene

VTI1BP3 (Vesicle Transport Through Interaction With T-SNAREs 1B Pseudogene 3) is a Pseudogene.

Additional gene information for VTI1BP3 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VTI1BP3 Gene

Genomics for VTI1BP3 Gene

GeneHancer (GH) Regulatory Elements for VTI1BP3 Gene

Promoters and enhancers for VTI1BP3 Gene
GeneHancer (GH) Identifier GH Type GH
Score
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH12I053101 Promoter/Enhancer 1.6 EPDnew Ensembl ENCODE 0.3 -27.7 -27657 3.4 HDGF PKNOX1 FOXA2 MLX ZFP64 ARID4B ATF7 RUNX3 RXRA SP5 SOAT2 RNU6-333P CSAD ZNF740 KRT76 IGFBP6 VTI1BP3
GH12I053115 Enhancer 0.7 ENCODE 0.4 -14.9 -14935 1 SMARCA5 BCOR ZNF740 ZBTB11 ZMYM3 NFXL1 CBX1 HDAC2 EGR1 ADNP SOAT2 ENSG00000257605 VTI1BP3
GH12I053112 Enhancer 0.4 ENCODE 0.4 -17.2 -17201 2.4 IKZF1 IKZF2 SOAT2 ZNF740 VTI1BP3
GH12I053118 Enhancer 0.2 ENCODE 0.4 -12.5 -12506 1.1 SOAT2 ZNF740 CSAD VTI1BP3
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around VTI1BP3 on UCSC Golden Path with GeneCards custom track

Genomic Locations for VTI1BP3 Gene

Genomic Locations for VTI1BP3 Gene
chr12:53,131,350-53,131,987
(GRCh38/hg38)
Size:
638 bases
Orientation:
Plus strand
chr12:53,525,134-53,525,771
(GRCh37/hg19)

Genomic View for VTI1BP3 Gene

Genes around VTI1BP3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VTI1BP3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VTI1BP3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VTI1BP3 Gene

Proteins for VTI1BP3 Gene

Post-translational modifications for VTI1BP3 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VTI1BP3 Gene

Domains & Families for VTI1BP3 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VTI1BP3 Gene

Function for VTI1BP3 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VTI1BP3 Gene

Localization for VTI1BP3 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VTI1BP3 Gene

Pathways & Interactions for VTI1BP3 Gene

SuperPathways for VTI1BP3 Gene

No Data Available

Interacting Proteins for VTI1BP3 Gene

Gene Ontology (GO) - Biological Process for VTI1BP3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VTI1BP3 Gene

Drugs & Compounds for VTI1BP3 Gene

No Compound Related Data Available

Transcripts for VTI1BP3 Gene

mRNA/cDNA for VTI1BP3 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for VTI1BP3 Gene

No ASD Table

Relevant External Links for VTI1BP3 Gene

GeneLoc Exon Structure for
VTI1BP3
ECgene alternative splicing isoforms for
VTI1BP3

Expression for VTI1BP3 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for VTI1BP3 Gene

NURSA nuclear receptor signaling pathways regulating expression of VTI1BP3 Gene:

VTI1BP3
genes like me logo Genes that share expression patterns with VTI1BP3: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VTI1BP3 Gene

Orthologs for VTI1BP3 Gene

Evolution for VTI1BP3 Gene

ENSEMBL:
Gene Tree for VTI1BP3 (if available)
TreeFam:
Gene Tree for VTI1BP3 (if available)

No data available for Orthologs for VTI1BP3 Gene

Paralogs for VTI1BP3 Gene

No data available for Paralogs for VTI1BP3 Gene

Variants for VTI1BP3 Gene

Additional Variant Information for VTI1BP3 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VTI1BP3

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VTI1BP3 Gene

Disorders for VTI1BP3 Gene

No disorders were found for VTI1BP3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VTI1BP3 Gene

Publications for VTI1BP3 Gene

No publications were found for VTI1BP3 Gene.

Products for VTI1BP3 Gene

Sources for VTI1BP3 Gene

Content
Loading form....