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Aliases for VTI1BP2 Gene

Aliases for VTI1BP2 Gene

  • Vesicle Transport Through Interaction With T-SNAREs 1B Pseudogene 2 2 3 5
  • Vesicle Transport Through Interaction With T-SNAREs Homolog 1B (Yeast) Pseudogene 2 2

External Ids for VTI1BP2 Gene

Previous GeneCards Identifiers for VTI1BP2 Gene

  • GC04P184406

Summaries for VTI1BP2 Gene

GeneCards Summary for VTI1BP2 Gene

VTI1BP2 (Vesicle Transport Through Interaction With T-SNAREs 1B Pseudogene 2) is a Pseudogene.

Additional gene information for VTI1BP2 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VTI1BP2 Gene

Genomics for VTI1BP2 Gene

Regulatory Elements for VTI1BP2 Gene

Enhancers for VTI1BP2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH04H183468 1.4 FANTOM5 Ensembl ENCODE 0.4 -13.6 -13638 3 SOX13 ZNF211 FOXA2 SAP130 MAX CEBPG RAD21 YY1 ZNF316 NFE2 CDKN2AIP RWDD4 TRAPPC11 ING2 VTI1BP2
GH04H183472 0.9 Ensembl ENCODE 0.4 -10.9 -10850 0 ELF3 SCRT1 CTCF ZNF654 TRIM22 REST RAD21 CC2D1A SCRT2 SMC3 RWDD4 TRAPPC11 VTI1BP2 CDKN2AIP
GH04H183465 0.5 FANTOM5 0.4 -17.3 -17315 0 ZNF766 CDKN2AIP TRAPPC11 RWDD4 VTI1BP2
GH04H183449 0.6 ENCODE 0.3 -33.6 -33595 0 ZNF664 JUND POLR2A HNF4G FOS HNF4A LOC389247 ING2 CDKN2AIP VTI1BP2
GH04H183492 0.4 ENCODE 0.4 +10.0 9953 2 CEBPB CDKN2AIP RWDD4 TRAPPC11 VTI1BP2 LOC389247
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around VTI1BP2 on UCSC Golden Path with GeneCards custom track

Genomic Location for VTI1BP2 Gene

Chromosome:
4
Start:
183,483,350 bp from pter
End:
183,484,416 bp from pter
Size:
1,067 bases
Orientation:
Plus strand

Genomic View for VTI1BP2 Gene

Genes around VTI1BP2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VTI1BP2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VTI1BP2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VTI1BP2 Gene

Proteins for VTI1BP2 Gene

Post-translational modifications for VTI1BP2 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VTI1BP2 Gene

Domains & Families for VTI1BP2 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VTI1BP2 Gene

Function for VTI1BP2 Gene

Animal Model Products

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for VTI1BP2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

No data available for Molecular function , Enzyme Numbers (IUBMB) , Phenotypes From GWAS Catalog , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VTI1BP2 Gene

Localization for VTI1BP2 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VTI1BP2 Gene

Pathways & Interactions for VTI1BP2 Gene

SuperPathways for VTI1BP2 Gene

No Data Available

Interacting Proteins for VTI1BP2 Gene

Gene Ontology (GO) - Biological Process for VTI1BP2 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VTI1BP2 Gene

Drugs & Compounds for VTI1BP2 Gene

No Compound Related Data Available

Transcripts for VTI1BP2 Gene

mRNA/cDNA for VTI1BP2 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

CRISPR Products

Clone Products

  • Applied Biological Materials Clones for VTI1BP2
  • Vectors and viruses for ORF, Lenti, Retro, Adenovirus, AAV, and more

Alternative Splicing Database (ASD) splice patterns (SP) for VTI1BP2 Gene

No ASD Table

Relevant External Links for VTI1BP2 Gene

GeneLoc Exon Structure for
VTI1BP2
ECgene alternative splicing isoforms for
VTI1BP2

Expression for VTI1BP2 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for VTI1BP2 Gene

mRNA differential expression in normal tissues according to GTEx for VTI1BP2 Gene

This gene is overexpressed in Adrenal Gland (x6.3), Testis (x5.6), and Pituitary (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of VTI1BP2 Gene:

VTI1BP2
genes like me logo Genes that share expression patterns with VTI1BP2: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VTI1BP2 Gene

Orthologs for VTI1BP2 Gene

Evolution for VTI1BP2 Gene

ENSEMBL:
Gene Tree for VTI1BP2 (if available)
TreeFam:
Gene Tree for VTI1BP2 (if available)

No data available for Orthologs for VTI1BP2 Gene

Paralogs for VTI1BP2 Gene

No data available for Paralogs for VTI1BP2 Gene

Variants for VTI1BP2 Gene

Relevant External Links for VTI1BP2 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VTI1BP2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VTI1BP2 Gene

Disorders for VTI1BP2 Gene

No disorders were found for VTI1BP2 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VTI1BP2 Gene

Publications for VTI1BP2 Gene

  1. Toward a complete human genome sequence. (PMID: 9847074) Sanger Center … Genome Sequencing Center (Genome research 1998) 3 60

Products for VTI1BP2 Gene

Sources for VTI1BP2 Gene

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