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Aliases for VTI1BP1 Gene

Aliases for VTI1BP1 Gene

  • Vesicle Transport Through Interaction With T-SNAREs 1B Pseudogene 1 2 3 5
  • Vesicle Transport Through Interaction With T-SNAREs Homolog 1B (Yeast) Pseudogene 1 2

External Ids for VTI1BP1 Gene

Previous GeneCards Identifiers for VTI1BP1 Gene

  • GC03P099946

Summaries for VTI1BP1 Gene

GeneCards Summary for VTI1BP1 Gene

VTI1BP1 (Vesicle Transport Through Interaction With T-SNAREs 1B Pseudogene 1) is a Pseudogene.

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VTI1BP1 Gene

Genomics for VTI1BP1 Gene

Regulatory Elements for VTI1BP1 Gene

Enhancers for VTI1BP1 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH03G100168 0.6 ENCODE dbSUPER 11.7 -55.6 -55556 3.1 NFIC VTI1BP1 FILIP1L CMSS1 TBC1D23 GC03P100163 GC03P100180
GH03G100226 1 Ensembl ENCODE 0.7 +1.8 1844 1.9 HDAC1 ATF1 JUN ZMYM3 CEBPG RAD21 FOSL1 ZNF316 NCOR1 MAFK TBC1D23 FILIP1L CMSS1 VTI1BP1 GC03P100236
GH03G100225 0.6 FANTOM5 0.7 +0.5 470 0.3 MBD2 SMARCA4 DPF2 FEZF1 TBC1D23 FILIP1L CMSS1 VTI1BP1 GC03P100236
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around VTI1BP1 on UCSC Golden Path with GeneCards custom track

Promoters for VTI1BP1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00000155614 151 399 MBD2 SMARCA4 DPF2 ZBTB33 FEZF1 RAD21

Genomic Location for VTI1BP1 Gene

Chromosome:
3
Start:
100,225,250 bp from pter
End:
100,226,270 bp from pter
Size:
1,021 bases
Orientation:
Plus strand

Genomic View for VTI1BP1 Gene

Genes around VTI1BP1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VTI1BP1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VTI1BP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VTI1BP1 Gene

Proteins for VTI1BP1 Gene

Post-translational modifications for VTI1BP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VTI1BP1 Gene

Domains & Families for VTI1BP1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VTI1BP1 Gene

Function for VTI1BP1 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VTI1BP1 Gene

Localization for VTI1BP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for VTI1BP1 Gene

Pathways & Interactions for VTI1BP1 Gene

SuperPathways for VTI1BP1 Gene

No Data Available

Interacting Proteins for VTI1BP1 Gene

Gene Ontology (GO) - Biological Process for VTI1BP1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VTI1BP1 Gene

Drugs & Compounds for VTI1BP1 Gene

No Compound Related Data Available

Transcripts for VTI1BP1 Gene

mRNA/cDNA for VTI1BP1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for VTI1BP1 Gene

No ASD Table

Relevant External Links for VTI1BP1 Gene

GeneLoc Exon Structure for
VTI1BP1
ECgene alternative splicing isoforms for
VTI1BP1

Expression for VTI1BP1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for VTI1BP1 Gene

NURSA nuclear receptor signaling pathways regulating expression of VTI1BP1 Gene:

VTI1BP1
genes like me logo Genes that share expression patterns with VTI1BP1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VTI1BP1 Gene

Orthologs for VTI1BP1 Gene

Evolution for VTI1BP1 Gene

ENSEMBL:
Gene Tree for VTI1BP1 (if available)
TreeFam:
Gene Tree for VTI1BP1 (if available)

No data available for Orthologs for VTI1BP1 Gene

Paralogs for VTI1BP1 Gene

No data available for Paralogs for VTI1BP1 Gene

Variants for VTI1BP1 Gene

Relevant External Links for VTI1BP1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VTI1BP1

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VTI1BP1 Gene

Disorders for VTI1BP1 Gene

No disorders were found for VTI1BP1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VTI1BP1 Gene

Publications for VTI1BP1 Gene

No publications were found for VTI1BP1 Gene.

Products for VTI1BP1 Gene

Sources for VTI1BP1 Gene

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