VPS54 Gene
protein-coding GIFtS : 50
GCID: GC02 M064119
vacuolar protein sorting 54 homolog (S. cerevisiae) (Previous name: vacuolar protein sorting 54 (yeast) )
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Aliasesfor VPS54 gene
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc ,
7 Ensembl ,
8 DME ,
9 miRBase ,
and/or 10 fRNAdb )About This Section Aliases Vacuolar Protein Sorting 54 Homolog (S. Cerevisiae) 1 2 SLP-8p2 HCC81 2 3 VPS54L2 Hepatocellular Carcinoma Protein 82 3 WR2 Tumor Antigen HOM-HCC-82 3 HVps54L1 Tumor Antigen SLP-8p2 3 Vacuolar Protein Sorting-Associated Protein 542 Vacuolar Protein Sorting 54 (Yeast)1
Export aliases for VPS54 gene to outside databases Previous GC identifers: GC02M064076 GC02M064093 GC02M064094 GC02M064031 GC02M063973 GC02M063859
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Summariesfor VPS54 gene (According to Entrez Gene ,
Tocris Bioscience ,
Wikipedia's
Gene Wiki ,
PharmGKB ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
About This Section Entrez Gene summary for VPS54 : This gene encodes for a protein that in yeast forms part of a trimeric vacuolar-protein-sorting complex that is required for retrograde transport of proteins from prevacuoles to the late Golgi compartment. As in yeast, mammalian Vps54 proteins contain a coiled-coil region and dileucine motifs. Alternative splicing results in multiple transcript variants encoding different isoforms (provided by RefSeq, Jul 2008) UniProtKB/Swiss-Prot: VPS54_HUMAN, Q9P1Q0 Function : May be involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex isrequired for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Viewsfor VPS54 gene
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 37) ,
and/or miRBase ,
Genomic Views according to
UCSC (hg19) and
Ensembl (release 69) ,
Regulatory elements and Epigenetics data according to
QIAGEN ,
SABiosciences , and/or
SwitchGear Genomics )About This Section RefSeq DNA sequence: NC_000002.11 NC_018913.1 NT_022184.15 Regulatory elements: SABiosciences Regulatory transcription factor binding sites in the VPS54 gene promoter: USF1 USF2 USF-1:USF-2 MEF-2A USF-1 FOXO1a aMEF-2 FOXO1 Other transcription factors Search SABiosciences Chromatin IP Primers for VPS54 Epigenetics: QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat VPS54
Genomic Location: Genomic View : UCSC Golden Path with GeneCards custom track Entrez Gene cytogenetic band: 2p13-p14 Ensembl cytogenetic band: 2p14 HGNC cytogenetic band: 2p15-p14 VPS54 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc information about chromosome 2 GeneLoc Exon Structure
GeneLoc location for GC02M064119: view genomic region
(about GC identifiers )
Start:
64,119,667 bp from pter
End:
64,246,567 bp from pter
Size:
126,901 bases
Orientation:
minus strand
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Proteinsfor VPS54 gene
(According to
1 UniProtKB ,
HORDE ,
neXtProt ,
Ensembl ,
and/or Reactome ,
Modification sites according to 2 PhosphoSitePlus ,
Specific Peptides from DME ,
Protein expression images according to data from SPIRE MOPED and PaxDb ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from
EMD Millipore ,
R&D Systems ,
GenScript ,
Enzo Life Sciences ,
OriGene ,
Novus Biologicals ,
Sino Biological ,
ProSpec , and/or
Uscn ,
Biochemical Assays by
EMD Millipore ,
R&D Systems ,
OriGene ,
GenScript ,
Cell Signaling Technology ,
Enzo Life Sciences , and/or
Uscn ,
Ontologies according to Gene
Ontology Consortium 01 Mar 2013 and
Entrez Gene ,
Antibodies by
EMD Millipore ,
R&D Systems ,
GenScript ,
Cell Signaling Technology ,
OriGene ,
Novus Biologicals ,
Thermo Fisher Scientific ,
Abcam , and/or
Uscn )
About This Section UniProtKB/Swiss-Prot: VPS54_HUMAN, Q9P1Q0 (See
protein sequence )Recommended Name: Vacuolar protein sorting-associated protein 54 Size : 977 amino acids; 110589 Da
Subunit : Component of the Golgi-associated retrograde protein (GARP) complex, also called VFT (VPS fifty-three)complex, composed of VPS51, VPS52, VPS53 and VPS54
Sequence caution : Sequence=BAA92134.1; Type=Erroneous initiation;
Secondary accessions : Q5VIR5 Q86YF7 Q8N6G3 Q9NPV0 Q9NT07 Q9NUJ0Alternative splicing : 5 isoforms : Q9P1Q0-1 Q9P1Q0-2 Q9P1Q0-3 Q9P1Q0-4 Q9P1Q0-5 (No experimental confirmation available)Explore the universe of human proteins at neXtProt for VPS54: NX_Q9P1Q0 Post-translational modifications:
View modification sites using PhosphoSitePlus 2 View neXtProt modification sites for NX_Q9P1Q0 VPS54 Protein expression data from MOPED and PaxDb : About this image
REFSEQ proteins (2 alternative transcripts):
NP_001005739.1 NP_057600.2 ENSEMBL proteins: ENSP00000346499 ENSP00000272322 ENSP00000386980 ENSP00000414725 ENSP00000445040 Human Recombinant Protein Products: Gene Ontology (GO): 1 cellular component term (GO ID links to tree view) : About this table
VPS54 for ontologies About GeneDecksing VPS54 Antibody Products: Assay Products for VPS54:
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Protein
Domains / Familiesfor VPS54 gene (According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
About This Section
VPS54 for domains About GeneDecksing 2 InterPro domains/families :
Graphical View of Domain Structure for InterPro Entry Q9P1Q0 ProtoNet protein and cluster: Q9P1Q0
1 Blocks protein family : IPB012501 Vps54-like UniProtKB/Swiss-Prot: VPS54_HUMAN, Q9P1Q0 Similarity : Belongs to the VPS54 family
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Functionfor VPS54 gene
(According to 1 UniProtKB ,
Genatlas ,
LifeMap Discovery™ ,
IUBMB , and/or
2 DME ,
Human phenotypes from GenomeRNAi ,
Animal models from MGI Mar 06 2013,
bound targets from SABiosciences ,
miRNA Gene Targets from miRTarBase
shRNA from
OriGene ,
RNAi from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
microRNA from QIAGEN ,
Gene Editing from DNA2.0 ,
Clones from EMD Millipore ,
OriGene ,
SwitchGear Genomics ,
GenScript ,
Sino Biological ,
DNA2.0 ,
and Vector BioLabs ,
Cell Lines from GenScript ,
LifeMap BioReagents ,
In Situ Hybridization Assays from Advanced Cell Diagnostics ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene .)
About This Section Function Summary: UniProtKB/Swiss-Prot: VPS54_HUMAN, Q9P1Q0 Function : May be involved in retrograde transport from early and late endosomes to the late Golgi. The GARP complex isrequired for the maintenance of the cycling of mannose 6-phosphate receptors between the TGN and endosomes, this cycling is necessary for proper lysosomal sorting of acid hydrolases such as CTSD
Clone Products: Browse Clones for the Expression of Recombinant Proteins Available from EMD Millipore OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for VPS54 (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for VPS54 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): VPS54 (NM_001005739 ) Browse Sino Biological Human cDNA Clones DNA2.0 Custom Codon Optimized Gene
Synthesis Service for VPS54 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat VPS54
In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for VPS54
Gene Ontology (GO): 1 molecular function term (GO ID links to tree view) : About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0005515 protein binding
IPI --
VPS54 for ontologies About GeneDecksing Animal Models: 13 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Vps54) :
VPS54 for phenotypes About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Pathways & Interactionsfor VPS54 gene
(Pathways according to
EMD Millipore ,
R&D Systems ,
Cell Signaling Technology ,
KEGG ,
PharmGKB ,
BioSystems ,
Reactome ,
Tocris Bioscience ,
GeneGo (Thomson Reuters) ,
QIAGEN ,
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Interaction Networks according to
SABiosciences ,
and/or STRING ,
Interactions according to 1 UniProtKB ,
2 MINT ,
3 I2D , and/or
4 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Mar 2013 via
Entrez Gene) .
About This Section Interactions: SABiosciences Gene Network CentralTM Interacting Genes and Proteins Network for VPS54 STRING Interaction
Network Preview (showing 1 interactants - click image to see more details)2 Interacting proteins for VPS54 (Q9P1Q0 3 ENSP00000272322 4 ) via UniProtKB, MINT, STRING , and/or I2D About this table Gene Ontology (GO): 5/6 biological process terms (GO ID links to tree view) (see all 6 ): About this table
GO ID Qualified GO term Evidence PubMed IDs GO:0015031 protein transport
IEA -- GO:0040007 growth
IEA -- GO:0042147 retrograde transport, endosome to Golgi
IEA -- GO:0048873 homeostasis of number of cells within a tissue
IEA -- GO:0050881 musculoskeletal movement
IEA --
VPS54 for ontologies About GeneDecksing
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Drugs & Compoundsfor VPS54 gene (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
EMD Millipore , Tocris Bioscience
HMDB ,
BitterDB , and/or
Novoseek , and Drugs according to
DrugBank ,
Enzo Life Sciences , and/or
PharmGKB , with drugs/clinical trials/news
search links to CenterWatch )
About This Section Browse Tocris compounds for VPS54 Search CenterWatch for drugs/clinical trials and news about VPS54
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Transcriptsfor VPS54 gene (Secondary structures according to
fRNAdb ,
GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 235 Homo sapiens; Mar 10 2013) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
transcript ids from Ensembl
with links to UCSC ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from
EMD Millipore ,
siRNAs from
OriGene ,
QIAGEN ,
shRNA from
OriGene ,
microRNA from QIAGEN ,
Tagged/untagged cDNA clones from
OriGene ,
SwitchGear Genomics ,
GenScript ,
DNA2.0 ,
Vector BioLabs ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN
)About This Section REFSEQ mRNAs for VPS54 gene (2 alternative transcripts): NM_001005739.1 NM_016516.2 Unigene Cluster for VPS54:
Vacuolar protein sorting 54 homolog (S. cerevisiae) Hs.48499 [show with all ESTs ] Unigene Representative Sequence: AK124436 5 Ensembl transcripts including schematic representations, and UCSC links where relevant : ENST00000354504 (uc002scn.3 uc002sco.3 uc010fct.3 ) ENST00000272322 (uc002scq.3 )ENST00000409558 (uc002scp.3 ) ENST00000416400 ENST00000483277 Clone Products: OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for VPS54 (see all 5 ) OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for VPS54 (see all 2 )OriGene custom cloning services – gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling GenScript: all cDNA clones in your preferred vector (see all 2 ): VPS54 (NM_001005739 ) DNA2.0 Custom Codon Optimized Gene
Synthesis Service for VPS54 Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat VPS54
Additional cDNA sequence: AF102177.1 AK002205.1 AK025545.1 AK094019.1 AK124436.1 AK126141.1 AK292669.1 AK292889.1 AL137604.1 AL359939.1 AY444798.1 BC030275.1 BC041868.1 CR749701.1
10 DOTS entries : DT.100025644 DT.100648268
DT.443152 DT.99950695 DT.95269718 DT.100776628 DT.121020675 DT.431793 DT.121020693 DT.91995140 24/136 AceView cDNA sequences (see all 136 ):
BU689982 BM542779 AA810742 BP351131 BQ424740 CR749701 BM724998 BU618428 AK124436 BX279581 AL359939 AL137604 AK002205 BE671145 AI400048 AA427813 CK822939 AW663966 AA314675 AA287061 BQ102353 CK724970 AK025545 BG024675 GeneLoc Exon Structure 3 Alternative Splicing Database (ASD) splice patterns (SP) for VPS54 About this scheme ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14a · 14b ^ 15a · 15b ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23a · 23b SP1 :                               -       -                 SP2 :                               -                       SP3 :                                                    
ECgene alternative splicing isoforms for VPS54
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Expression for VPS54 gene
(RNA expression data according to
H-InvDB ,
NONCODE ,
miRBase , and
RNAdb ,
Expression images according to data from
BioGPS ,
Illumina Human BodyMap , and
CGAP
SAGE ,
Sets of similar genes according to GeneDecks ,
in vivo and in vitro expression data from LifeMap Discovery™ ,
plus additional links to
Genevestigator , and/or
SOURCE , and/or
BioGPS , and/or
UniProtKB ,
PCR Arrays from
SABiosciences ,
Primers from
OriGene ,
SABiosciences , and/or
QIAGEN ,
In Situ Hybridization Assays from Advanced Cell Diagnostics )
About This Section VPS54 expression in normal human tissues (normalized intensities) See probesets specificity/sensitivity at GeneAnnot About this image BioGPS CGAP TAG: GGATGTGTTT
About this image VPS54 expression in embryonic tissues and stem cells Expression by the Database of Embryonic development, Stem cell research, and
Regenerative medicine About this table 1 LifeMap In Vivo Development Anatomical Compartment/Cell Tissue Anatomical Compartment
Cell Category (developmental path) Head Mesenchyme Branchial Arch 1 Paraxial Mesoderm Cells Bone, Skeletal Muscle Expression: Positive Negative
Selective markerExperimental details:
Curated
Microarrays
In-situ hybridization
See VPS54 Protein Expression from SPIRE MOPED and PaxDB Genevestigator expression for VPS54 SOURCE GeneReport for Unigene cluster: Hs.48499 SABiosciences Custom PCR Arrays for VPS54 Primer Products: OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for VPS54Browse OriGene validated miRNA SYBR primer pairs SABiosciences RT2 qPCR Primer Assay in human , mouse , rat VPS54 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat VPS54 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat VPS54 In Situ Assay Products: Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for VPS54
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Orthologsfor VPS54 gene
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
,
5 MGI Mar 06 2013,
with possible further links to
Flybase
and/or
WormBase ,
and/or
6 Ensembl pan taxonomic compara ,
Gene Trees according to Ensembl and
TreeFam )
About This Section
This gene was present in the common ancestor of eukaryotes.
Orthologs for VPS54 gene from 9/27 species (see all 27 ) About this table
ENSEMBL Gene Tree for VPS54 (if available)TreeFam Gene Tree for VPS54 (if available)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Paralogsfor VPS54 gene (Paralogs according to
1 HomoloGene , 2 Ensembl , and 3 SIMAP , Pseudogenes according to 4 Pseudogene.org Build 68)About This Section --
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genomic Variantsfor VPS54 gene (SNPs/Variants according to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE ,
UniProtKB , and
DNA2.0 ,
Linkage Disequilibrium by HapMap ,
Structural Variations(CNVs/InDels/Inversions) from the Database of Genomic Variants , Mutations from the Human Gene
Mutation Database (HGMD) and the Locus Specific Mutation
Databases (LSDB) , Blood group antigen gene mutations by BGMUT ,
Resequencing Primers from QIAGEN ,
Cancer Mutation PCR Arrays and Assays and Copy Number PCR Arrays from SABiosciences )
About This Section
Genomic Data Transcription Related Data Allele Frequencies SNP ID Valid Clinical significance Chr 2 pos Sequence # AA Chg Type More # Allele freq Pop Total sample More
HapMap Linkage Disequilibrium report for VPS54 (64119667 - 64246567 bp)
Structural Variations (Copy Number Variations, Insertions/Deletions, Inversions) Database of Genomic Variants (DGV) variations for VPS54: --
SABiosciences Cancer Mutation PCR Assays
QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing VPS54
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Disorders
/ Diseasesfor VPS54 gene
(in which this Gene is Involved, According to MalaCards ,
OMIM, UniProtKB ,
the University of Copenhagen DISEASES
database ,
Genatlas , GeneTests ,
GAD ,
HuGE Navigator ,
and/or TGDB .)
About This Section
VPS54 for disorders About GeneDecksing
OMIM gene information: 614633
OMIM disorders : --4 diseases for VPS54 : About MalaCards hepatocellular carcinoma amyotrophic lateral sclerosis carcinoma lateral sclerosis 1 disease from the University of Copenhagen DISEASES database for VPS54 :Amyotrophic lateral sclerosis Human Genome Epidemiology (HuGE) Navigator: VPS54 (2 documents) Export disorders for VPS54 gene to outside databases
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Publicationsfor VPS54 gene (in
PubMed .
Associations of this gene to articles via
1 Entrez Gene ,
2 UniProtKB/Swiss-Prot ,
3 HGNC ,
4 GAD ,
5 PharmGKB ,
6 HMDB ,
7 DrugBank ,
8 UniProtKB/TrEMBL ,
9 Novoseek , and/or
10 fRNAdb )
About This Section PubMed articles for VPS54 gene, integrated from 9 sources (see all 15 ): (articles sorted by number of sources associating them with VPS54) Utopia : connect your pdf to the dynamic world of online information
Ang2/fat-free is a conserved subunit of the Golgi-ass ociated retrograde protein complex. (PubMed id 20685960) 1 , 2 PAcrez-Victoria F.J....Bonifacino J.S. (2010) Requirement of the Human GARP Complex for Mannose 6-phosphate- receptor-dependent Sorting of Cathepsin D to Lysosomes. (PubMed id 18367545) 1 , 2 Perez-Victoria F.J.... Bonifacino J.S. (2008) Characterization of the human GARP (Golgi associated retrograde protein) complex. (PubMed id 15878329) 1 , 2 Liewen H.... Stenner-Liewen F. (2005) The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC). (PubMed id 15489334) 1 , 2 Gerhard D.S....Malek J. (2004) Complete sequencing and characterization of 21,243 full-length human cDNAs. (PubMed id 14702039) 1 , 2 Ota T.... Sugano S. (2004) Identification, characterization and cytogenetic mapping of a yeast Vps54 homolog in rat and mouse. (PubMed id 12039048) 1 , 3 Walter L....Gunther E. (2002) Dual roles of the mammalian GARP complex in tethering and SNARE complex assembly at the trans-golgi network. (PubMed id 19620288) 1 , 9 PAcrez-Victoria F.J. and Bonifacino J.S. (2009) VPS54 genetic analysis in ALS Italian cohort. (PubMed id 21087364) 1 Corrado L....D'Alfonso S. (2011) Structural basis for the wobbler mouse neurodegenerat ive disorder caused by mutation in the Vps54 subunit of the GARP complex. (PubMed id 20615984) 1 PAcrez-Victoria F.J....Hierro A. (2010) Personalized smoking cessation: interactions between nicotine dose, dependence and quit-success genotype score. (PubMed id 20379614) 1 Rose J.E....Uhl G.R. (2010)
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
External Searches for VPS54 gene
(in PubMed ,
OMIM , and NCBI Bookshelf ) About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Genome Databases showing VPS54 gene
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
Kegg ,
and/or
H-InvDB )
About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Other Databases showing VPS54 gene
(According to HUGE )
About This Section --
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Specialized Databases showing VPS54 gene (According to PharmGKB ,
ATLAS , HORDE , IMGT , LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
About This Section Patent Information for VPS54 gene: Search GeneIP for patents involving VPS54 GeneCards and IP: Japan Patent Office Licenses GeneCards European Patent Office Licenses GeneCards Improving the IP Search
Jump to Section...
Aliases
Databases
Disorders / Diseases
Domains / Families
Drugs / Compounds
Expression
Function
Genomic Views
Intellectual Property
Orthologs
Paralogs
Pathways / Interactions
Products
Proteins
Publications
Search Box
Summaries
Transcripts
Variants
TOP
BOTTOM
Productsfor VPS54 gene (Antibodies, recombinant proteins, and assays from EMD Millipore , R&D Systems , OriGene , QIAGEN , GenScript , Cell Signaling Technology , SABiosciences , Novus Biologicals , Sino Biological , Enzo Life Sciences , Abcam , ProSpec , Uscn , Thermo Fisher Scientific , Gene Editing from DNA2.0 , Clones from EMD Millipore , OriGene , GenScript , Sino Biological , DNA2.0 , SwitchGear Genomics , Vector BioLabs , Cell lines from GenScript and LifeMap BioReagents , PCR Arrays from SABiosciences , Drugs and/or compounds from EMD Millipore , Tocris Bioscience , and/or
Enzo Life Sciences ), In Situ Hybridization Assays from Advanced Cell Diagnostics About This Section
Browse OriGene Antibodies OriGene shRNA RFP for VPS54 OriGene 29mer shRNA kits in GFP-retroviral vector in human , mouse , rat for VPS54 OriGene genome-wide validated SYBR primer pairs in human , mouse , rat for VPS54 OriGene Protein Over-expression Lysate for VPS54 Browse OriGene Fluorogenic Cell Assay Kits OriGene siRNA for VPS54 OriGene 3'-UTR Clone for VPS54 OriGene untagged cDNA clones in CMV expression vector in human , mouse , rat for VPS54 OriGene Myc/DDK tagged cDNA clones in CMV expression vector in human , mouse , rat for VPS54 Browse OriGene GFP tagged cDNA clones in CMV expression vector Browse OriGene MicroRNA Expression Plasmids Browse OriGene basic RS shRNAs Browse OriGene validated miRNA SYBR primer pairs Browse OriGene full length recombinant human proteins expressed in human HEK293 cells OriGene custom cloning services - gene synthesis, subcloning, mutagenesis,
variant library, vector shuttling OriGene Custom Antibody Services for VPS54 OriGene Custom Protein Services for VPS54 OriGene Custom Immunoassay Development
QIAGEN Custom miScript Target Protector blocks miRNA-binding site of in human, mouse, rat VPS54 QIAGEN SeqTarget long-range PCR primers in human , mouse , rat for resequencing VPS54 QIAGEN PyroMark CpG Assay predesigned Pyrosequencing DNA Methylation assays in human , mouse , rat VPS54 QIAGEN FlexiTube/FlexiPlate siRNA for gene silencing in human , mouse , rat VPS54 QIAGEN QuantiFast Probe-based Assays in human , mouse , rat VPS54 QIAGEN QuantiTect SYBR Green Assays in human , mouse , rat VPS54
Search Tocris compounds for VPS54
VPS54 Proteins, Antibodies, CLIAs, and ELISAs
Advanced Cell Diagnostics RNAscope RNA in situ hybridization assays for VPS54
Search ThermoFisher Antibodies for VPS54
Vector BioLabs ready-to-use adenovirus/AAV for human , mouse , rat VPS54
Jump to Section...
Aliases for VPS54
Databases for VPS54
Disorders / Diseases for VPS54
Domains / Families for VPS54
Drugs / Compounds for VPS54
Expression for VPS54
Function for VPS54
Genomic Views for VPS54
Intellectual Property for VPS54
Orthologs for VPS54
Paralogs for VPS54
Pathways / Interactions for VPS54
Products for VPS54
Proteins for VPS54
Publications for VPS54
Search Box for VPS54
Summaries for VPS54
Transcripts for VPS54
Variants for VPS54
TOP
BOTTOM