Free for academic non-profit institutions. Other users need a Commercial license

Aliases for VPS25P1 Gene

Aliases for VPS25P1 Gene

  • VPS25 Pseudogene 1 2 3 5
  • Vacuolar Protein Sorting 25 Homolog (S. Cerevisiae) Pseudogene 1 2

External Ids for VPS25P1 Gene

Previous GeneCards Identifiers for VPS25P1 Gene

  • GC01P118094

Summaries for VPS25P1 Gene

GeneCards Summary for VPS25P1 Gene

VPS25P1 (VPS25 Pseudogene 1) is a Pseudogene.

Additional gene information for VPS25P1 Gene

No data available for Entrez Gene Summary , CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VPS25P1 Gene

Genomics for VPS25P1 Gene

GeneHancer (GH) Regulatory Elements for VPS25P1 Gene

Promoters and enhancers for VPS25P1 Gene
GeneHancer (GH) Identifier GH Type GH
GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites
Gene Targets
GH01I117535 Enhancer 1.1 Ensembl ENCODE 0.4 -14.2 -14211 0.4 HDGF PKNOX1 ARNT IRF4 E2F8 ARID2 ZNF143 FOS RUNX3 NCOA1 GDAP2 FAM46C LOC100996263 ENSG00000212266 GC01P117527 VPS25P1
GH01I117564 Enhancer 0.9 ENCODE dbSUPER 0.4 +15.5 15479 0.2 HCFC1 ARNT NFRKB TEAD4 CEBPB USF2 CEBPG EP300 MEF2D IKZF1 LOC100996263 FAM46C ENSG00000212266 VPS25P1
GH01I117588 Enhancer 1 ENCODE dbSUPER 0.3 +41.3 41272 4.2 FOXA2 RB1 SIN3A RAD21 YY1 FOS RCOR1 RXRA GATAD2B ZNF398 ENSG00000212266 FAM46C LOC100996263 VPS25P1
GH01I117565 Enhancer 0.7 dbSUPER 0.4 +16.4 16428 1.5 NFRKB TEAD4 CEBPB ZMYM3 CEBPG EP300 MEF2D MAFF POLR2A IKZF1 LOC100996263 FAM46C ENSG00000212266 VPS25P1
GH01I117570 Enhancer 0.9 ENCODE dbSUPER 0.3 +22.0 22017 1.5 GTF2F1 PKNOX1 ESRRA SIN3A ZBTB40 CTBP1 ZNF444 SMARCE1 RFX1 MAZ LOC100996263 FAM46C ENSG00000212266 VPS25P1
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around VPS25P1 on UCSC Golden Path with GeneCards custom track

Genomic Locations for VPS25P1 Gene

Genomic Locations for VPS25P1 Gene
508 bases
Plus strand

Genomic View for VPS25P1 Gene

Genes around VPS25P1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VPS25P1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VPS25P1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VPS25P1 Gene

Proteins for VPS25P1 Gene

Post-translational modifications for VPS25P1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VPS25P1 Gene

Domains & Families for VPS25P1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VPS25P1 Gene

Function for VPS25P1 Gene

Phenotypes From GWAS Catalog for VPS25P1 Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VPS25P1 Gene

Localization for VPS25P1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VPS25P1 Gene

Pathways & Interactions for VPS25P1 Gene

SuperPathways for VPS25P1 Gene

No Data Available

Interacting Proteins for VPS25P1 Gene

Gene Ontology (GO) - Biological Process for VPS25P1 Gene


No data available for Pathways by source and SIGNOR curated interactions for VPS25P1 Gene

Drugs & Compounds for VPS25P1 Gene

No Compound Related Data Available

Transcripts for VPS25P1 Gene

mRNA/cDNA for VPS25P1 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for VPS25P1 Gene

No ASD Table

Relevant External Links for VPS25P1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for VPS25P1 Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for VPS25P1 Gene

NURSA nuclear receptor signaling pathways regulating expression of VPS25P1 Gene:

genes like me logo Genes that share expression patterns with VPS25P1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VPS25P1 Gene

Orthologs for VPS25P1 Gene

Evolution for VPS25P1 Gene

Gene Tree for VPS25P1 (if available)
Gene Tree for VPS25P1 (if available)

No data available for Orthologs for VPS25P1 Gene

Paralogs for VPS25P1 Gene

No data available for Paralogs for VPS25P1 Gene

Variants for VPS25P1 Gene

Additional Variant Information for VPS25P1 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VPS25P1 Gene

Disorders for VPS25P1 Gene

No disorders were found for VPS25P1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VPS25P1 Gene

Publications for VPS25P1 Gene

No publications were found for VPS25P1 Gene.

Products for VPS25P1 Gene

Sources for VPS25P1 Gene

Loading form....