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Aliases for VN1R96P Gene

Subcategory (RNA class) for VN1R96P Gene

lncRNA

Aliases for VN1R96P Gene

  • Vomeronasal 1 Receptor 96 Pseudogene 2 3 5

External Ids for VN1R96P Gene

ORGUL Members for VN1R96P Gene

Previous GeneCards Identifiers for VN1R96P Gene

  • GC19M045320
  • GC19M040628
  • GC19M037062

Summaries for VN1R96P Gene

GeneCards Summary for VN1R96P Gene

VN1R96P (Vomeronasal 1 Receptor 96 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VN1R96P Gene

Genomics for VN1R96P Gene

Regulatory Elements for VN1R96P Gene

Enhancers for VN1R96P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH19F040119 0.7 ENCODE 0.8 +2.2 2162 0.2 SOX13 BHLHE40 THRB ZIC2 ZBTB7A ZFHX2 IKZF1 NR2F6 CREM EGR2 VN1R96P ZNF780A
GH19F040142 1.1 Ensembl ENCODE 0.3 -22.1 -22071 3.8 BCOR PKNOX1 MXI1 USF1 TBL1XR1 ZNF133 CHD4 ZMYM3 ZNF664 ZNF366 ZNF780A FCGBP GC19M040148 VN1R96P
GH19F040139 0.9 ENCODE 0.3 -17.8 -17759 0.2 INSM2 KLF17 FEZF1 ZNF2 RAD21 ZEB1 RFX5 ZNF335 GLIS2 ZNF654 TTC9B CNTD2 HIPK4 ENSG00000206925 C19orf47 PLD3 GC19M040148 VN1R96P
GH19F040146 0.9 Ensembl ENCODE 0.3 -25.5 -25532 1.9 ZNF280D JUN ZIC2 ZEB1 ZNF121 ZFHX2 JUND POLR2A IKZF1 FOS ZNF780A GC19M040148 VN1R96P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around VN1R96P on UCSC Golden Path with GeneCards custom track

Genomic Location for VN1R96P Gene

Chromosome:
19
Start:
40,121,311 bp from pter
End:
40,122,230 bp from pter
Size:
920 bases
Orientation:
Minus strand

Genomic View for VN1R96P Gene

Genes around VN1R96P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VN1R96P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VN1R96P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VN1R96P Gene

Proteins for VN1R96P Gene

Post-translational modifications for VN1R96P Gene

No Post-translational modifications

No data available for DME Specific Peptides for VN1R96P Gene

Domains & Families for VN1R96P Gene

Gene Families for VN1R96P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with VN1R96P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VN1R96P Gene

Function for VN1R96P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VN1R96P Gene

Localization for VN1R96P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for VN1R96P Gene

Pathways & Interactions for VN1R96P Gene

SuperPathways for VN1R96P Gene

No Data Available

Interacting Proteins for VN1R96P Gene

Gene Ontology (GO) - Biological Process for VN1R96P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VN1R96P Gene

Transcripts for VN1R96P Gene

mRNA/cDNA for VN1R96P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for VN1R96P Gene

No ASD Table

Relevant External Links for VN1R96P Gene

GeneLoc Exon Structure for
VN1R96P
ECgene alternative splicing isoforms for
VN1R96P

Expression for VN1R96P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for VN1R96P Gene

mRNA differential expression in normal tissues according to GTEx for VN1R96P Gene

This gene is overexpressed in Testis (x6.6), Brain - Caudate (basal ganglia) (x4.7), Brain - Nucleus accumbens (basal ganglia) (x4.5), Brain - Frontal Cortex (BA9) (x4.4), and Minor Salivary Gland (x4.1).

NURSA nuclear receptor signaling pathways regulating expression of VN1R96P Gene:

VN1R96P
genes like me logo Genes that share expression patterns with VN1R96P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for VN1R96P Gene

Orthologs for VN1R96P Gene

Evolution for VN1R96P Gene

ENSEMBL:
Gene Tree for VN1R96P (if available)
TreeFam:
Gene Tree for VN1R96P (if available)

No data available for Orthologs for VN1R96P Gene

Paralogs for VN1R96P Gene

No data available for Paralogs for VN1R96P Gene

Variants for VN1R96P Gene

Relevant External Links for VN1R96P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VN1R96P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VN1R96P Gene

Disorders for VN1R96P Gene

No disorders were found for VN1R96P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VN1R96P Gene

Publications for VN1R96P Gene

  1. Extreme variability among mammalian V1R gene families. (PMID: 19952141) Young J.M. … Trask B.J. (Genome Res. 2010) 3 64

Products for VN1R96P Gene

Sources for VN1R96P Gene

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