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Aliases for VN1R57P Gene

Subcategory (RNA class) for VN1R57P Gene

lncRNA

Aliases for VN1R57P Gene

  • Vomeronasal 1 Receptor 57 Pseudogene 2 3
  • RP11-275O18.1 5

External Ids for VN1R57P Gene

ORGUL Members for VN1R57P Gene

Previous GeneCards Identifiers for VN1R57P Gene

  • GC00U927200
  • GC12U901341
  • GC12P082262

Summaries for VN1R57P Gene

GeneCards Summary for VN1R57P Gene

VN1R57P (Vomeronasal 1 Receptor 57 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VN1R57P Gene

Genomics for VN1R57P Gene

Regulatory Elements for VN1R57P Gene

Enhancers for VN1R57P Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH12F081941 1.3 FANTOM5 Ensembl ENCODE 0.2 +74.5 74533 2.2 CTCF PKNOX1 MTA2 TRIM22 BMI1 TBX21 EP300 IKZF1 NBN MLLT1 PPFIA2 CCDC59 LOC101928449 VN1R57P
GH12F081810 1 FANTOM5 Ensembl 0.2 -57.9 -57868 0.6 MTA2 JUNB TRIM22 BMI1 EBF1 TBX21 EP300 IKZF1 TARDBP ETV6 PPFIA2 VN1R57P
GH12F081811 0.8 FANTOM5 Ensembl 0.2 -57.0 -56984 0.4 ZNF157 TEAD4 CEBPB PPFIA2 VN1R57P
GH12F081949 0.8 FANTOM5 Ensembl 0.2 +81.5 81533 1.0 TBP RAD51 NFYB FOXP2 PPFIA2 TMTC2 CCDC59 LOC101928449 VN1R57P
GH12F081800 0.4 ENCODE 0.2 -67.5 -67468 0.8 NR2F2 PPFIA2 VN1R57P
- Elite enhancer and/or Elite enhancer-gene association Download GeneHancer data dump

Enhancers around VN1R57P on UCSC Golden Path with GeneCards custom track

Genomic Location for VN1R57P Gene

Chromosome:
12
Start:
81,868,368 bp from pter
End:
81,869,098 bp from pter
Size:
731 bases
Orientation:
Plus strand

Genomic View for VN1R57P Gene

Genes around VN1R57P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VN1R57P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VN1R57P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VN1R57P Gene

Proteins for VN1R57P Gene

Post-translational modifications for VN1R57P Gene

No Post-translational modifications

No data available for DME Specific Peptides for VN1R57P Gene

Domains & Families for VN1R57P Gene

Gene Families for VN1R57P Gene

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with VN1R57P: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VN1R57P Gene

Function for VN1R57P Gene

Animal Model Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VN1R57P Gene

Localization for VN1R57P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for VN1R57P Gene

Pathways & Interactions for VN1R57P Gene

SuperPathways for VN1R57P Gene

No Data Available

Interacting Proteins for VN1R57P Gene

Gene Ontology (GO) - Biological Process for VN1R57P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VN1R57P Gene

Transcripts for VN1R57P Gene

mRNA/cDNA for VN1R57P Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for VN1R57P Gene

No ASD Table

Relevant External Links for VN1R57P Gene

GeneLoc Exon Structure for
VN1R57P
ECgene alternative splicing isoforms for
VN1R57P

Expression for VN1R57P Gene

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and SAGE for VN1R57P Gene

NURSA nuclear receptor signaling pathways regulating expression of VN1R57P Gene:

VN1R57P
genes like me logo Genes that share expression patterns with VN1R57P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners and mRNA Expression by UniProt/SwissProt for VN1R57P Gene

Orthologs for VN1R57P Gene

Evolution for VN1R57P Gene

ENSEMBL:
Gene Tree for VN1R57P (if available)
TreeFam:
Gene Tree for VN1R57P (if available)

No data available for Orthologs for VN1R57P Gene

Paralogs for VN1R57P Gene

No data available for Paralogs for VN1R57P Gene

Variants for VN1R57P Gene

Relevant External Links for VN1R57P Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VN1R57P

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VN1R57P Gene

Disorders for VN1R57P Gene

No disorders were found for VN1R57P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot , Genatlas and External Links for VN1R57P Gene

Publications for VN1R57P Gene

  1. Extreme variability among mammalian V1R gene families. (PMID: 19952141) Young J.M. … Trask B.J. (Genome Res. 2010) 3 64

Products for VN1R57P Gene

Sources for VN1R57P Gene

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