Free for academic non-profit institutions. Other users need a Commercial license

Aliases for VN1R3 Gene

Subcategory (RNA class) for VN1R3 Gene

lncRNA

Aliases for VN1R3 Gene

  • Vomeronasal 1 Receptor 3 (Gene/Pseudogene) 2 3 5
  • Vomeronasal 1 Receptor 3 Pseudogene 2 3
  • V1RL3 3 4
  • Vomeronasal 1 Receptor 4 Pseudogene 3
  • Vomeronasal 1 Receptor 3 2
  • V1r-Like Receptor 3 4
  • V1RL3 Pseudogene 3
  • V1R-Like 3 3
  • FKSG46 3
  • V1RL3p 3

External Ids for VN1R3 Gene

ORGUL Members for VN1R3 Gene

Previous GeneCards Identifiers for VN1R3 Gene

  • GC16M032315
  • GC16M031815
  • GC16M031855
  • GC16M031856
  • GC16M031726
  • GC16M029379

Summaries for VN1R3 Gene

GeneCards Summary for VN1R3 Gene

VN1R3 (Vomeronasal 1 Receptor 3 (Gene/Pseudogene)) is a Protein Coding gene, and is affiliated with the lncRNA class. GO annotations related to this gene include pheromone receptor activity.

UniProtKB/Swiss-Prot for VN1R3 Gene

  • Putative pheromone receptor.

Gene Wiki entry for VN1R3 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VN1R3 Gene

Genomics for VN1R3 Gene

Regulatory Elements for VN1R3 Gene

Enhancers for VN1R3 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around VN1R3 on UCSC Golden Path with GeneCards custom track

Genomic Location for VN1R3 Gene

Chromosome:
16
Start:
31,807,590 bp from pter
End:
31,808,846 bp from pter
Size:
1,257 bases
Orientation:
Minus strand

Genomic View for VN1R3 Gene

Genes around VN1R3 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VN1R3 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VN1R3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VN1R3 Gene

Proteins for VN1R3 Gene

  • Protein details for VN1R3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BXE9-VN1R3_HUMAN
    Recommended name:
    Vomeronasal type-1 receptor 3
    Protein Accession:
    Q9BXE9

    Protein attributes for VN1R3 Gene

    Size:
    311 amino acids
    Molecular mass:
    34713 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • The gorilla and orangutan orthologous proteins do not exist, their genes are pseudogenes.

neXtProt entry for VN1R3 Gene

Proteomics data for VN1R3 Gene at MOPED

Post-translational modifications for VN1R3 Gene

No data available for DME Specific Peptides for VN1R3 Gene

Domains & Families for VN1R3 Gene

Gene Families for VN1R3 Gene

Protein Domains for VN1R3 Gene

Suggested Antigen Peptide Sequences for VN1R3 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

Q9BXE9

UniProtKB/Swiss-Prot:

VN1R3_HUMAN :
  • Belongs to the G-protein coupled receptor 1 family.
Family:
  • Belongs to the G-protein coupled receptor 1 family.
genes like me logo Genes that share domains with VN1R3: view

Function for VN1R3 Gene

Molecular function for VN1R3 Gene

UniProtKB/Swiss-Prot Function:
Putative pheromone receptor.

Phenotypes for VN1R3 Gene

GenomeRNAi human phenotypes for VN1R3:
genes like me logo Genes that share phenotypes with VN1R3: view

No data available for Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VN1R3 Gene

Localization for VN1R3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for VN1R3 Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for VN1R3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
genes like me logo Genes that share ontologies with VN1R3: view

No data available for Subcellular locations from COMPARTMENTS for VN1R3 Gene

Pathways & Interactions for VN1R3 Gene

SuperPathways for VN1R3 Gene

No Data Available

Interacting Proteins for VN1R3 Gene

Gene Ontology (GO) - Biological Process for VN1R3 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VN1R3 Gene

Drugs & Compounds for VN1R3 Gene

No Compound Related Data Available

Transcripts for VN1R3 Gene

mRNA/cDNA for VN1R3 Gene

(3) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for VN1R3 Gene

Vomeronasal 1 receptor 3 (gene/pseudogene):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for VN1R3 Gene

No ASD Table

Relevant External Links for VN1R3 Gene

GeneLoc Exon Structure for
VN1R3
ECgene alternative splicing isoforms for
VN1R3

Expression for VN1R3 Gene

mRNA expression in normal human tissues for VN1R3 Gene

SOURCE GeneReport for Unigene cluster for VN1R3 Gene Hs.257746

genes like me logo Genes that share expression patterns with VN1R3: view

Primer Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for VN1R3 Gene

Orthologs for VN1R3 Gene

Evolution for VN1R3 Gene

ENSEMBL:
Gene Tree for VN1R3 (if available)
TreeFam:
Gene Tree for VN1R3 (if available)

No data available for Orthologs for VN1R3 Gene

Paralogs for VN1R3 Gene

(6) SIMAP similar genes for VN1R3 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with VN1R3: view

No data available for Paralogs for VN1R3 Gene

Variants for VN1R3 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for VN1R3 Gene

VN1R3_HUMAN-Q9BXE9
There seems to be a deletion in the gene coding for this protein in about 98% of the population.

No data available for Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for VN1R3 Gene

Disorders for VN1R3 Gene

Relevant External Links for VN1R3

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
VN1R3

No disorders were found for VN1R3 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for VN1R3 Gene

Publications for VN1R3 Gene

  1. Evolutionary deterioration of the vomeronasal pheromone transduction pathway in catarrhine primates. (PMID: 12826614) Zhang J. … Webb D.M. (Proc. Natl. Acad. Sci. U.S.A. 2003) 3 4 67
  2. Extreme variability among mammalian V1R gene families. (PMID: 19952141) Young J.M. … Trask B.J. (Genome Res. 2010) 3
  3. Novel human vomeronasal receptor-like genes reveal species-specific families. (PMID: 12123587) Rodriguez I. … Mombaerts P. (Curr. Biol. 2002) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for VN1R3 Gene

Sources for VN1R3 Gene

Content