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Aliases for VN1R3 Gene

Subcategory (RNA class) for VN1R3 Gene

lncRNA

Aliases for VN1R3 Gene

  • Vomeronasal 1 Receptor 3 (Gene/Pseudogene) 2 3
  • Vomeronasal 1 Receptor 3 Pseudogene 2 3
  • V1RL3 3 4
  • Vomeronasal 1 Receptor 4 Pseudogene 3
  • Vomeronasal 1 Receptor 3 2
  • V1r-Like Receptor 3 4
  • V1RL3 Pseudogene 3
  • V1R-Like 3 3
  • FKSG46 3
  • V1RL3p 3

External Ids for VN1R3 Gene

ORGUL Members for VN1R3 Gene

Summaries for VN1R3 Gene

GeneCards Summary for VN1R3 Gene

VN1R3 (Vomeronasal 1 Receptor 3 (Gene/Pseudogene)) is a Protein Coding gene, and belongs to lncRNA RNA class. GO annotations related to this gene include pheromone receptor activity.

UniProtKB/Swiss-Prot for VN1R3 Gene

  • Putative pheromone receptor

Gene Wiki entry for VN1R3 Gene

No data available for Entrez Gene Summary , Tocris Summary , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VN1R3 Gene

Genomics for VN1R3 Gene

Genomic Location for VN1R3 Gene

Start:
31,807,590 bp from pter
End:
31,808,846 bp from pter
Size:
1,257 bases
Orientation:
Minus strand

Genomic View for VN1R3 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for VN1R3 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VN1R3 Gene

No data available for Regulatory Elements for VN1R3 Gene

Proteins for VN1R3 Gene

  • Protein details for VN1R3 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Q9BXE9-VN1R3_HUMAN
    Recommended name:
    Vomeronasal type-1 receptor 3
    Protein Accession:
    Q9BXE9
    Secondary Accessions:

    Protein attributes for VN1R3 Gene

    Size:
    311 amino acids
    Molecular mass:
    34713 Da
    Quaternary structure:
    No Data Available
    Miscellaneous:
    • The gorilla and orangutan orthologous proteins do not exist, their genes are pseudogenes

neXtProt entry for VN1R3 Gene

Proteomics data for VN1R3 Gene at MOPED

Post-translational modifications for VN1R3 Gene

No data available for DME Specific Peptides for VN1R3 Gene

Domains for VN1R3 Gene

Gene Families for VN1R3 Gene

HGNC:
  • VN1R :Vomeronasal receptors / Type 1
  • VN1RU :GPCR / Unclassified : Vomeronasal receptors, type 1

Protein Domains for VN1R3 Gene

UniProtKB/Swiss-Prot:

VN1R3_HUMAN
Family:
  • Belongs to the G-protein coupled receptor 1 family.:
    • Q9BXE9
genes like me logo Genes that share domains with VN1R3: view

Function for VN1R3 Gene

Molecular function for VN1R3 Gene

UniProtKB/Swiss-Prot Function: Putative pheromone receptor

Gene Ontology (GO) - Molecular Function for VN1R3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0016503 pheromone receptor activity IEA --
genes like me logo Genes that share ontologies with VN1R3: view

No data available for Enzyme Numbers (IUBMB) , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for VN1R3 Gene

Localization for VN1R3 Gene

Subcellular locations from UniProtKB/Swiss-Prot for VN1R3 Gene

Cell membrane; Multi-pass membrane protein.

Gene Ontology (GO) - Cellular Components for VN1R3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with VN1R3: view

Pathways for VN1R3 Gene

SuperPathways for VN1R3 Gene

No Data Available

Interacting Proteins for VN1R3 Gene

Gene Ontology (GO) - Biological Process for VN1R3 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0019236 response to pheromone IEA --
genes like me logo Genes that share ontologies with VN1R3: view

No data available for Pathways by source for VN1R3 Gene

Transcripts for VN1R3 Gene

mRNA/cDNA for VN1R3 Gene

(3) Additional mRNA sequences :
(2) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for VN1R3 Gene

Vomeronasal 1 receptor 3 (gene/pseudogene):
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for VN1R3 Gene

No ASD Table

Relevant External Links for VN1R3 Gene

GeneLoc Exon Structure for
VN1R3
ECgene alternative splicing isoforms for
VN1R3

Expression for VN1R3 Gene

mRNA expression in normal human tissues for VN1R3 Gene

SOURCE GeneReport for Unigene cluster for VN1R3 Gene Hs.257746

genes like me logo Genes that share expressions with VN1R3: view

Orthologs for VN1R3 Gene

This gene was present in the common ancestor of human and mouse.

Orthologs for VN1R3 Gene

Organism Taxonomy Gene Similarity Type Details
mouse
(Mus musculus)
Mammalia Vmn1r235 16
Species with no ortholog for VN1R3:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • chicken (Gallus gallus)
  • chimpanzee (Pan troglodytes)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • cow (Bos Taurus)
  • dog (Canis familiaris)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • lizard (Anolis carolinensis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • oppossum (Monodelphis domestica)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • platypus (Ornithorhynchus anatinus)
  • rainbow trout (Oncorhynchus mykiss)
  • rat (Rattus norvegicus)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • tropical clawed frog (Silurana tropicalis)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)
  • zebrafish (Danio rerio)

Evolution for VN1R3 Gene

ENSEMBL:
Gene Tree for VN1R3 (if available)
TreeFam:
Gene Tree for VN1R3 (if available)

Paralogs for VN1R3 Gene

Selected SIMAP similar genes for VN1R3 Gene using alignment to 1 proteins:

genes like me logo Genes that share paralogs with VN1R3: view

No data available for Paralogs for VN1R3 Gene

Variants for VN1R3 Gene

Polymorphic Variants from UniProtKB/Swiss-Prot for VN1R3 Gene

Q9BXE9-VN1R3_HUMAN
There seems to be a deletion in the gene coding for this protein in about 98% of the population

Relevant External Links for VN1R3 Gene

HapMap Linkage Disequilibrium report
VN1R3

No data available for Sequence variations from dbSNP and Humsavar and Structural Variations from Database of Genomic Variants (DGV) for VN1R3 Gene

Disorders for VN1R3 Gene

No disorders were found for VN1R3 Gene.

No data available for UniProtKB/Swiss-Prot for VN1R3 Gene

Publications for VN1R3 Gene

  1. Novel human vomeronasal receptor-like genes reveal species-specific families. (PMID: 12123587) Rodriguez I. … Mombaerts P. (Curr. Biol. 2002) 3 4
  2. Evolutionary deterioration of the vomeronasal pheromone transduction pathway in catarrhine primates. (PMID: 12826614) Zhang J. … Webb D.M. (Proc. Natl. Acad. Sci. U.S.A. 2003) 3 4
  3. Extreme variability among mammalian V1R gene families. (PMID: 19952141) Young J.M. … Trask B.J. (Genome Res. 2010) 3
  4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3

Products for VN1R3 Gene

Sources for VN1R3 Gene

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