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Aliases for VN1R10P Gene

Subcategory (RNA class) for VN1R10P Gene

lncRNA

Aliases for VN1R10P Gene

  • Vomeronasal 1 Receptor 10 Pseudogene 2 3 5
  • Vomeronasal Olfactory Receptor, (Chromosome 6) Subtype I, Member 1 Pseudogene 2 3
  • Vomeronasal 1 Receptor 1 Pseudogene 3
  • B24o18.2 3
  • Hs6V1-1p 3
  • VNR6I1P 3
  • FKSG83 3

External Ids for VN1R10P Gene

ORGUL Members for VN1R10P Gene

Previous HGNC Symbols for VN1R10P Gene

  • VNR6I1P

Previous GeneCards Identifiers for VN1R10P Gene

  • GC00U914056
  • GC06U900683
  • GC06P027292
  • GC06P027100

Summaries for VN1R10P Gene

GeneCards Summary for VN1R10P Gene

VN1R10P (Vomeronasal 1 Receptor 10 Pseudogene) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VN1R10P Gene

Genomics for VN1R10P Gene

Regulatory Elements for VN1R10P Gene

Enhancers for VN1R10P Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around VN1R10P on UCSC Golden Path with GeneCards custom track

Genomic Location for VN1R10P Gene

Chromosome:
6
Start:
27,324,761 bp from pter
End:
27,325,963 bp from pter
Size:
1,203 bases
Orientation:
Plus strand

Genomic View for VN1R10P Gene

Genes around VN1R10P on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VN1R10P Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VN1R10P Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VN1R10P Gene

Proteins for VN1R10P Gene

Post-translational modifications for VN1R10P Gene

No Post-translational modifications

No data available for DME Specific Peptides for VN1R10P Gene

Domains & Families for VN1R10P Gene

Gene Families for VN1R10P Gene

Suggested Antigen Peptide Sequences for VN1R10P Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with VN1R10P: view

No data available for Protein Domains and UniProtKB/Swiss-Prot for VN1R10P Gene

Function for VN1R10P Gene

Phenotypes for VN1R10P Gene

genes like me logo Genes that share phenotypes with VN1R10P: view

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VN1R10P Gene

Localization for VN1R10P Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for VN1R10P Gene

Pathways & Interactions for VN1R10P Gene

SuperPathways for VN1R10P Gene

No Data Available

Interacting Proteins for VN1R10P Gene

Gene Ontology (GO) - Biological Process for VN1R10P Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VN1R10P Gene

Drugs & Compounds for VN1R10P Gene

No Compound Related Data Available

Transcripts for VN1R10P Gene

mRNA/cDNA for VN1R10P Gene

(1) REFSEQ mRNAs :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for VN1R10P Gene

No ASD Table

Relevant External Links for VN1R10P Gene

GeneLoc Exon Structure for
VN1R10P
ECgene alternative splicing isoforms for
VN1R10P

Expression for VN1R10P Gene

mRNA expression in normal human tissues for VN1R10P Gene

mRNA differential expression in normal tissues according to GTEx for VN1R10P Gene

This gene is overexpressed in Testis (x30.0).

SOURCE GeneReport for Unigene cluster for VN1R10P Gene Hs.326753

genes like me logo Genes that share expression patterns with VN1R10P: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for VN1R10P Gene

Orthologs for VN1R10P Gene

Evolution for VN1R10P Gene

ENSEMBL:
Gene Tree for VN1R10P (if available)
TreeFam:
Gene Tree for VN1R10P (if available)

No data available for Orthologs for VN1R10P Gene

Paralogs for VN1R10P Gene

No data available for Paralogs for VN1R10P Gene

Variants for VN1R10P Gene

Sequence variations from dbSNP and Humsavar for VN1R10P Gene

SNP ID Clin Chr 06 pos Sequence Context AA Info Type
rs16897710 -- 27,325,149(+) GTATG(G/T)ACTTC nc-transcript-variant
rs9348759 -- 27,323,109(+) tcctt(C/T)ttttg upstream-variant-2KB
rs113716932 -- 27,324,346(+) ACAAT(G/T)AGCAC upstream-variant-2KB
rs4145206 -- 27,324,043(+) AAGTT(A/G)TGTAA upstream-variant-2KB
rs9366690 -- 27,323,300(+) tttcc(C/T)ttagc upstream-variant-2KB

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for VN1R10P Gene

Disorders for VN1R10P Gene

Relevant External Links for VN1R10P

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
VN1R10P

No disorders were found for VN1R10P Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for VN1R10P Gene

Publications for VN1R10P Gene

  1. The palmitoyl acyltransferase HIP14 shares a high proportion of interactors with huntingtin: implications for a role in the pathogenesis of Huntington's disease. (PMID: 24705354) Butland S.L. … Hayden M.R. (Hum. Mol. Genet. 2014) 3 67
  2. Extreme variability among mammalian V1R gene families. (PMID: 19952141) Young J.M. … Trask B.J. (Genome Res. 2010) 3
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. (PMID: 12477932) Strausberg R.L. … Marra M.A. (Proc. Natl. Acad. Sci. U.S.A. 2002) 3
  4. The sequence of the human genome. (PMID: 11181995) Venter J.C. … Zhu X. (Science 2001) 3

Products for VN1R10P Gene

Sources for VN1R10P Gene

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