Free for academic non-profit institutions. Other users need a Commercial license

Aliases for VIPR2 Gene

Aliases for VIPR2 Gene

  • Vasoactive Intestinal Peptide Receptor 2 2 3 5
  • Pituitary Adenylate Cyclase-Activating Polypeptide Type III Receptor 3 4
  • Helodermin-Preferring VIP Receptor 3 4
  • VIP And PACAP Receptor 2 2 3
  • PACAP Type III Receptor 3 4
  • PACAP-R-3 3 4
  • PACAP-R3 3 4
  • VIP-R-2 3 4
  • VPAC2 3 4
  • Vasoactive Intestinal Polypeptide Receptor 2 3
  • C16DUPq36.3 3
  • DUP7q36.3 3
  • VPCAP2R 3
  • VPAC2R 3
  • VIP2R 4

External Ids for VIPR2 Gene

Previous GeneCards Identifiers for VIPR2 Gene

  • GC07M157122
  • GC07M158123
  • GC07M158237
  • GC07M158320
  • GC07M158513
  • GC07M158820
  • GC07M152560

Summaries for VIPR2 Gene

Entrez Gene Summary for VIPR2 Gene

  • This gene encodes a receptor for vasoactive intestinal peptide, a small neuropeptide. Vasoactive intestinal peptide is involved in smooth muscle relaxation, exocrine and endocrine secretion, and water and ion flux in lung and intestinal epithelia. Its actions are effected through integral membrane receptors associated with a guanine nucleotide binding protein which activates adenylate cyclase. [provided by RefSeq, Aug 2011]

GeneCards Summary for VIPR2 Gene

VIPR2 (Vasoactive Intestinal Peptide Receptor 2) is a Protein Coding gene. Diseases associated with VIPR2 include Schizophrenia 16 and Holoprosencephaly-3. Among its related pathways are Signaling by GPCR and Peptide ligand-binding receptors. GO annotations related to this gene include G-protein coupled receptor activity and vasoactive intestinal polypeptide receptor activity. An important paralog of this gene is ADCYAP1R1.

UniProtKB/Swiss-Prot for VIPR2 Gene

  • This is a receptor for VIP as well as PACAP-38 and -27, the activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Can be coupled to phospholipase C.

Tocris Summary for VIPR2 Gene

  • Vasoactive intestinal peptide (VIP) receptors are a group of Gs -protein-coupled receptors that are currently divided into two subtypes; VPAC1 and VPAC2. They are widely distributed throughout the central nervous system.

Gene Wiki entry for VIPR2 Gene

No data available for PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VIPR2 Gene

Genomics for VIPR2 Gene

Regulatory Elements for VIPR2 Gene

Enhancers for VIPR2 Gene
GeneHancer Identifier Enhancer Score Enhancer Sources Gene-Enhancer Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Gene Targets for Enhancer
GH07F159115 0.6 ENCODE 27 +28.6 28628 2.0 CTCF MAX RAD21 VIPR2 PIR32261 PIR57199
GH07F159112 0.5 ENCODE 24.6 +32.1 32141 0.6 CBX3 L3MBTL2 CREB3L1 RNF2 NR2F1 ETV1 ZBTB40 GABPA NR2F6 MYC VIPR2 PIR57199 PIR32261
GH07F159109 0.2 ENCODE 24.5 +35.7 35733 0.2 POLR2H VIPR2 PIR57199 PIR32261
GH07F159108 0.2 ENCODE 24.5 +36.9 36853 0.2 VIPR2 PIR57199 PIR32261
GH07F159105 1 ENCODE 24.5 +38.3 38274 2.2 KLF1 PKNOX1 TAF1 KLF17 GLI4 POLR2A SMARCC2 ZNF202 SP3 MAZ VIPR2 PIR57199 PIR32261
- Elite enhancer/Elite enhancer-gene association Download Table
Download GeneHancer data dump

Enhancers around VIPR2 on UCSC Golden Path with GeneCards custom track

Promoters for VIPR2 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters
ENSR00001049062 257 1801 ZNF324 ZFHX2 ZNF366 PATZ1 ZBTB20 EZH2 EGR2 ZBTB10 SMARCC1 SP3

Genomic Location for VIPR2 Gene

Chromosome:
7
Start:
159,028,175 bp from pter
End:
159,144,957 bp from pter
Size:
116,783 bases
Orientation:
Minus strand

Genomic View for VIPR2 Gene

Genes around VIPR2 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VIPR2 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VIPR2 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VIPR2 Gene

Proteins for VIPR2 Gene

  • Protein details for VIPR2 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    P41587-VIPR2_HUMAN
    Recommended name:
    Vasoactive intestinal polypeptide receptor 2
    Protein Accession:
    P41587
    Secondary Accessions:
    • Q13053
    • Q15870
    • Q53Y09
    • Q6ZN22
    • Q9UCW0

    Protein attributes for VIPR2 Gene

    Size:
    438 amino acids
    Molecular mass:
    49479 Da
    Quaternary structure:
    No Data Available

    Three dimensional structures from OCA and Proteopedia for VIPR2 Gene

    Alternative splice isoforms for VIPR2 Gene

    UniProtKB/Swiss-Prot:

neXtProt entry for VIPR2 Gene

Post-translational modifications for VIPR2 Gene

  • Glycosylation at Asn 58, Asn 88, and Asn 92
  • Modification sites at PhosphoSitePlus

No data available for DME Specific Peptides for VIPR2 Gene

Domains & Families for VIPR2 Gene

Graphical View of Domain Structure for InterPro Entry

P41587

UniProtKB/Swiss-Prot:

VIPR2_HUMAN :
  • Belongs to the G-protein coupled receptor 2 family.
Family:
  • Belongs to the G-protein coupled receptor 2 family.
genes like me logo Genes that share domains with VIPR2: view

Function for VIPR2 Gene

Molecular function for VIPR2 Gene

GENATLAS Biochemistry:
vasoactive intestinal peptide,also responding to the pituitary adenylate cyclase activating polypeptide in stimulating cAMP production,receptor 2,G protein coupled,secretin receptor superfamily
UniProtKB/Swiss-Prot Function:
This is a receptor for VIP as well as PACAP-38 and -27, the activity of this receptor is mediated by G proteins which activate adenylyl cyclase. Can be coupled to phospholipase C.

Gene Ontology (GO) - Molecular Function for VIPR2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0004888 transmembrane signaling receptor activity IEA --
GO:0004930 G-protein coupled receptor activity IEA,TAS 7811244
GO:0004999 vasoactive intestinal polypeptide receptor activity IEA --
genes like me logo Genes that share ontologies with VIPR2: view
genes like me logo Genes that share phenotypes with VIPR2: view

Animal Models for VIPR2 Gene

MGI Knock Outs for VIPR2:

Animal Model Products

  • Taconic Biosciences Mouse Models for VIPR2

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for VIPR2

Flow Cytometry Products

No data available for Enzyme Numbers (IUBMB) , Human Phenotype Ontology , miRNA , Transcription Factor Targets and HOMER Transcription for VIPR2 Gene

Localization for VIPR2 Gene

Subcellular locations from UniProtKB/Swiss-Prot for VIPR2 Gene

Cell membrane; Multi-pass membrane protein.

Subcellular locations from

COMPARTMENTS
Jensen Localization Image for VIPR2 Gene COMPARTMENTS Subcellular localization image for VIPR2 gene
Compartment Confidence
plasma membrane 5
cytosol 1
extracellular 1
nucleus 1

Gene Ontology (GO) - Cellular Components for VIPR2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0005886 plasma membrane TAS --
GO:0005887 integral component of plasma membrane TAS 7811244
GO:0016020 membrane IEA --
GO:0016021 integral component of membrane IEA --
genes like me logo Genes that share ontologies with VIPR2: view

Pathways & Interactions for VIPR2 Gene

genes like me logo Genes that share pathways with VIPR2: view

Pathways by source for VIPR2 Gene

Gene Ontology (GO) - Biological Process for VIPR2 Gene

GO ID Qualified GO term Evidence PubMed IDs
GO:0007165 signal transduction IEA,TAS 7811244
GO:0007166 cell surface receptor signaling pathway IEA --
GO:0007186 G-protein coupled receptor signaling pathway IEA --
GO:0007190 activation of adenylate cyclase activity IEA --
GO:0007267 cell-cell signaling TAS 8757618
genes like me logo Genes that share ontologies with VIPR2: view

No data available for SIGNOR curated interactions for VIPR2 Gene

Drugs & Compounds for VIPR2 Gene

(28) Drugs for VIPR2 Gene - From: ApexBio, DGIdb, IUPHAR, Tocris, and Novoseek

Name Status Disease Links Group Role Mechanism of Action Clinical Trials
Secretin Approved, Investigational Pharma Full agonist, Agonist, binder 31
Bay 55-9837 Pharma Agonist Potent and selective VPAC2 agonist 0
[Ac-Tyr1,D-Phe2]GRF 1-29, amide (human) Pharma VIP receptor antagonist 0
[D-p-Cl-Phe6,Leu17]-VIP Pharma Selective VIP receptor antagonist 0
VIP (6-28) (human, rat, porcine, bovine) Pharma VIP receptor antagonist 0

(4) Additional Compounds for VIPR2 Gene - From: IUPHAR, Novoseek, and Tocris

Name Synonyms Role CAS Number PubChem IDs PubMed IDs
[<sup>125</sup>I]VIP
Full agonist, Agonist
[Lys<sup>15</sup>,Arg<sup>16</sup>,Leu<sup>27</sup>]VIP-(1?ao7)/GRF-(8?ao27)-NH<sub>2</sub>
Full agonist, Agonist
VIP (human, rat, mouse, rabbit, canine, porcine)
40077-57-4

(5) Tocris Compounds for VIPR2 Gene

Compound Action Cas Number
[Ac-Tyr1,D-Phe2]GRF 1-29, amide (human) VIP receptor antagonist 93965-89-0
[D-p-Cl-Phe6,Leu17]-VIP Selective VIP receptor antagonist 102805-45-8
Bay 55-9837 Potent and selective VPAC2 agonist 463930-25-8
VIP (6-28) (human, rat, porcine, bovine) VIP receptor antagonist 69698-54-0
VIP (human, rat, mouse, rabbit, canine, porcine) Involved in neurotransmission and smooth muscle relaxation 40077-57-4

(6) ApexBio Compounds for VIPR2 Gene

genes like me logo Genes that share compounds with VIPR2: view

Transcripts for VIPR2 Gene

Unigene Clusters for VIPR2 Gene

Vasoactive intestinal peptide receptor 2:
Representative Sequences:

Inhibitory RNA Products

Clone Products

  • Addgene plasmids for VIPR2

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for VIPR2 Gene

ExUns: 1a · 1b · 1c ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13a · 13b ^ 14a · 14b ^ 15a · 15b · 15c
SP1: - - - -
SP2: -
SP3: -
SP4:
SP5: -

Relevant External Links for VIPR2 Gene

GeneLoc Exon Structure for
VIPR2
ECgene alternative splicing isoforms for
VIPR2

Expression for VIPR2 Gene

mRNA expression in normal human tissues for VIPR2 Gene

mRNA expression in embryonic tissues and stem cells from LifeMap Discovery

mRNA differential expression in normal tissues according to GTEx for VIPR2 Gene

This gene is overexpressed in Esophagus - Gastroesophageal Junction (x4.4).

Protein differential expression in normal tissues from HIPED for VIPR2 Gene

This gene is overexpressed in Plasma (67.8).

Integrated Proteomics: protein expression in normal tissues and cell lines from ProteomicsDB, PaxDb, and MOPED for VIPR2 Gene



Protein tissue co-expression partners for VIPR2 Gene

NURSA nuclear receptor signaling pathways regulating expression of VIPR2 Gene:

VIPR2

SOURCE GeneReport for Unigene cluster for VIPR2 Gene:

Hs.585052

mRNA Expression by UniProt/SwissProt for VIPR2 Gene:

P41587-VIPR2_HUMAN
Tissue specificity: Expressed in CD4+ T-cells, but not in CD8+ T-cells. Expressed in the T-cell lines Jurkat, Peer, MOLT-4, HSB, YT and SUP-T1, but not in the T-cell lines HARRIS and HuT 78.
genes like me logo Genes that share expression patterns with VIPR2: view

Primer Products

Orthologs for VIPR2 Gene

This gene was present in the common ancestor of chordates.

Orthologs for VIPR2 Gene

Organism Taxonomy Gene Similarity Type Details
chimpanzee
(Pan troglodytes)
Mammalia VIPR2 34 35
  • 99.39 (n)
cow
(Bos Taurus)
Mammalia VIPR2 34 35
  • 86.31 (n)
dog
(Canis familiaris)
Mammalia VIPR2 34 35
  • 83.72 (n)
mouse
(Mus musculus)
Mammalia Vipr2 34 16 35
  • 82.9 (n)
rat
(Rattus norvegicus)
Mammalia Vipr2 34
  • 82.36 (n)
oppossum
(Monodelphis domestica)
Mammalia VIPR2 35
  • 79 (a)
OneToOne
platypus
(Ornithorhynchus anatinus)
Mammalia VIPR2 35
  • 78 (a)
OneToOne
chicken
(Gallus gallus)
Aves VPAC2 35
  • 73 (a)
OneToOne
VIPR2 34
  • 70.79 (n)
lizard
(Anolis carolinensis)
Reptilia VIPR2 35
  • 67 (a)
OneToOne
tropical clawed frog
(Silurana tropicalis)
Amphibia vipr2 34
  • 65.35 (n)
zebrafish
(Danio rerio)
Actinopterygii vipr2 34 35
  • 62.07 (n)
rainbow trout
(Oncorhynchus mykiss)
Actinopterygii Omy.4810 34
Species where no ortholog for VIPR2 was found in the sources mined by GeneCards:
  • A. gosspyii yeast (Ashbya gossypii)
  • Actinobacteria (Mycobacterium tuberculosis)
  • African clawed frog (Xenopus laevis)
  • African malaria mosquito (Anopheles gambiae)
  • Alicante grape (Vitis vinifera)
  • alpha proteobacteria (Wolbachia pipientis)
  • amoeba (Dictyostelium discoideum)
  • Archea (Pyrococcus horikoshii)
  • baker's yeast (Saccharomyces cerevisiae)
  • barley (Hordeum vulgare)
  • beta proteobacteria (Neisseria meningitidis)
  • bread mold (Neurospora crassa)
  • Chromalveolata (Phytophthora infestans)
  • common water flea (Daphnia pulex)
  • corn (Zea mays)
  • E. coli (Escherichia coli)
  • filamentous fungi (Aspergillus nidulans)
  • Firmicute bacteria (Streptococcus pneumoniae)
  • fission yeast (Schizosaccharomyces pombe)
  • fruit fly (Drosophila melanogaster)
  • green algae (Chlamydomonas reinhardtii)
  • honey bee (Apis mellifera)
  • K. lactis yeast (Kluyveromyces lactis)
  • loblloly pine (Pinus taeda)
  • malaria parasite (Plasmodium falciparum)
  • medicago trunc (Medicago Truncatula)
  • moss (Physcomitrella patens)
  • orangutan (Pongo pygmaeus)
  • pig (Sus scrofa)
  • rice (Oryza sativa)
  • rice blast fungus (Magnaporthe grisea)
  • schistosome parasite (Schistosoma mansoni)
  • sea anemone (Nematostella vectensis)
  • sea squirt (Ciona intestinalis)
  • sea squirt (Ciona savignyi)
  • sea urchin (Strongylocentrotus purpuratus)
  • sorghum (Sorghum bicolor)
  • soybean (Glycine max)
  • stem rust fungus (Puccinia graminis)
  • sugarcane (Saccharum officinarum)
  • thale cress (Arabidopsis thaliana)
  • tomato (Lycopersicon esculentum)
  • toxoplasmosis (Toxoplasma gondii)
  • Trichoplax (Trichoplax adhaerens)
  • wheat (Triticum aestivum)
  • worm (Caenorhabditis elegans)

Evolution for VIPR2 Gene

ENSEMBL:
Gene Tree for VIPR2 (if available)
TreeFam:
Gene Tree for VIPR2 (if available)

Paralogs for VIPR2 Gene

(15) SIMAP similar genes for VIPR2 Gene using alignment to 4 proteins:

genes like me logo Genes that share paralogs with VIPR2: view

Variants for VIPR2 Gene

Sequence variations from dbSNP and Humsavar for VIPR2 Gene

SNP ID Clin Chr 07 pos Sequence Context AA Info Type
rs10133 -- 159,031,754(+) GGCTG(C/T)GGCAC intron-variant, nc-transcript-variant, reference, missense
rs1017032 -- 159,035,021(-) TATAC(A/C)TGCAA intron-variant
rs1017033 -- 159,034,710(-) ATTCT(C/T)CTGTA intron-variant
rs1017034 -- 159,027,769(-) GCACA(C/T)GCGTG downstream-variant-500B
rs10215842 -- 159,053,861(+) TAAAA(C/T)GGCAA intron-variant

Structural Variations from Database of Genomic Variants (DGV) for VIPR2 Gene

Variant ID Type Subtype PubMed ID
dgv11804n54 CNV gain 21841781
dgv6772n100 CNV gain 25217958
esv1258689 CNV insertion 17803354
esv1585946 CNV insertion 17803354
esv1955405 CNV deletion 18987734
esv2080886 CNV deletion 18987734
esv23771 CNV loss 19812545
esv2621732 CNV deletion 19546169
esv2667886 CNV deletion 23128226
esv2762713 CNV loss 21179565
esv28310 CNV loss 19812545
esv3323566 CNV duplication 20981092
esv3414637 CNV duplication 20981092
esv3542830 CNV deletion 23714750
esv3576497 CNV gain 25503493
esv3615741 CNV gain 21293372
esv3615756 CNV gain 21293372
esv3615757 CNV gain 21293372
esv8515 OTHER inversion 19470904
esv998866 CNV deletion 20482838
nsv1018315 CNV gain 25217958
nsv1018458 CNV gain 25217958
nsv1020010 CNV loss 25217958
nsv1027282 CNV gain 25217958
nsv1027593 CNV loss 25217958
nsv1032688 CNV loss 25217958
nsv1032814 CNV gain 25217958
nsv1075498 CNV deletion 25765185
nsv1078848 CNV insertion 25765185
nsv1117475 CNV tandem duplication 24896259
nsv1129291 CNV insertion 24896259
nsv1132968 CNV insertion 24896259
nsv1137328 CNV deletion 24896259
nsv1140880 CNV deletion 24896259
nsv1143355 CNV deletion 24896259
nsv1146594 OTHER inversion 26484159
nsv1146819 CNV deletion 26484159
nsv1147200 CNV insertion 26484159
nsv1148146 CNV deletion 26484159
nsv435963 OTHER inversion 17901297
nsv465262 CNV gain 19166990
nsv519749 CNV loss 19592680
nsv526756 CNV gain 19592680
nsv609363 CNV loss 21841781
nsv609419 CNV gain 21841781
nsv609425 CNV loss 21841781
nsv820022 CNV loss 19587683
nsv831202 CNV gain 17160897
nsv951684 CNV deletion 24416366

Variation tolerance for VIPR2 Gene

Residual Variation Intolerance Score: 85.4% of all genes are more intolerant (likely to be disease-causing)
Gene Damage Index Score: 3.81; 58.45% of all genes are more intolerant (likely to be disease-causing)

Relevant External Links for VIPR2 Gene

Human Gene Mutation Database (HGMD)
VIPR2
SNPedia medical, phenotypic, and genealogical associations of SNPs for
VIPR2

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for VIPR2 Gene

Disorders for VIPR2 Gene

MalaCards: The human disease database

(3) MalaCards diseases for VIPR2 Gene - From: OMIM, DISEASES, and GeneCards

Disorder Aliases PubMed IDs
schizophrenia 16
holoprosencephaly-3
  • holoprosencephaly 3
schizophrenia
  • schizophrenia 12
- elite association - COSMIC cancer census association via MalaCards
Search VIPR2 in MalaCards View complete list of genes associated with diseases

Relevant External Links for VIPR2

Genetic Association Database (GAD)
VIPR2
Human Genome Epidemiology (HuGE) Navigator
VIPR2
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
VIPR2
genes like me logo Genes that share disorders with VIPR2: view

No data available for UniProtKB/Swiss-Prot and Genatlas for VIPR2 Gene

Publications for VIPR2 Gene

  1. Differential association of circadian genes with mood disorders: CRY1 and NPAS2 are associated with unipolar major depression and CLOCK and VIP with bipolar disorder. (PMID: 20072116) Soria V. … Urretavizcaya M. (Neuropsychopharmacology 2010) 3 22 46 64
  2. Structure of the human VIP2R gene for vasoactive intestinal peptide type 2 receptor. (PMID: 10481065) Lutz E.M. … Harmar A.J. (FEBS Lett. 1999) 3 4 22 64
  3. Chromosomal localization in mouse and human of the vasoactive intestinal peptide receptor type 2 gene: a possible contributor to the holoprosencephaly 3 phenotype. (PMID: 8938447) Mackay M. … Harmar A.J. (Genomics 1996) 3 4 22 64
  4. Molecular cloning and functional characterization of a human VIP receptor from SUP-T1 lymphoblasts. (PMID: 7811244) Svoboda M. … Robberecht P. (Biochem. Biophys. Res. Commun. 1994) 2 3 4 64
  5. Assessment of a polymorphism of SDK1 with hypertension in Japanese Individuals. (PMID: 19851296) Oguri M. … Yamada Y. (Am. J. Hypertens. 2010) 3 46 64

Products for VIPR2 Gene

Sources for VIPR2 Gene

Content
Loading form....