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Aliases for VENTXP7 Gene

Subcategory (RNA class) for VENTXP7 Gene

lncRNA

Aliases for VENTXP7 Gene

  • VENT Homeobox Pseudogene 7 2 3
  • VENT-Like Homeobox 1 2 3
  • VENT Homeobox (Xenopus Laevis) Pseudogene 7 2
  • VENT-Like Homeobox Pseudogene 7 3
  • VENTX1 3
  • HPX42 3

External Ids for VENTXP7 Gene

ORGUL Members for VENTXP7 Gene

Previous HGNC Symbols for VENTXP7 Gene

  • VENTX1

Summaries for VENTXP7 Gene

Entrez Gene Summary for VENTXP7 Gene

  • Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the Vent homeobox gene family. [provided by RefSeq, Jul 2008]

GeneCards Summary for VENTXP7 Gene

VENTXP7 (VENT Homeobox Pseudogene 7) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VENTXP7 Gene

Genomics for VENTXP7 Gene

Regulatory Elements for VENTXP7 Gene

Genomic Location for VENTXP7 Gene

Start:
21,405,726 bp from pter
End:
21,406,708 bp from pter
Size:
983 bases
Orientation:
Plus strand

Genomic View for VENTXP7 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for VENTXP7 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VENTXP7 Gene

Proteins for VENTXP7 Gene

Post-translational modifications for VENTXP7 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VENTXP7 Gene

Domains for VENTXP7 Gene

Gene Families for VENTXP7 Gene

HGNC:
  • NKL :Homeoboxes / ANTP class : NKL subclass

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with VENTXP7: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VENTXP7 Gene

Function for VENTXP7 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targeting and HOMER Transcription for VENTXP7 Gene

Localization for VENTXP7 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for VENTXP7 Gene

Pathways for VENTXP7 Gene

SuperPathways for VENTXP7 Gene

No Data Available

Interacting Proteins for VENTXP7 Gene

Gene Ontology (GO) - Biological Process for VENTXP7 Gene

None

No data available for Pathways by source for VENTXP7 Gene

Transcripts for VENTXP7 Gene

mRNA/cDNA for VENTXP7 Gene

(1) Selected AceView cDNA sequences:
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

miRNA Products

Inhibitory RNA Products

  • Predesigned siRNA for gene silencing in human,mouse,rat for VENTXP7

Primer Products

  • OriGene qSTAR qPCR primer pairs in human,mouse,rat for VENTXP7
  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

Flow Cytometry Products

Alternative Splicing Database (ASD) splice patterns (SP) for VENTXP7 Gene

No ASD Table

Relevant External Links for VENTXP7 Gene

GeneLoc Exon Structure for
VENTXP7
ECgene alternative splicing isoforms for
VENTXP7

Expression for VENTXP7 Gene

mRNA expression in normal human tissues for VENTXP7 Gene

SOURCE GeneReport for Unigene cluster for VENTXP7 Gene Hs.543226

genes like me logo Genes that share expressions with VENTXP7: view

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein expression and mRNA Expression by UniProt/SwissProt for VENTXP7 Gene

Orthologs for VENTXP7 Gene

Evolution for VENTXP7 Gene

ENSEMBL:
Gene Tree for VENTXP7 (if available)
TreeFam:
Gene Tree for VENTXP7 (if available)

No data available for Orthologs for VENTXP7 Gene

Paralogs for VENTXP7 Gene

No data available for Paralogs for VENTXP7 Gene

Variants for VENTXP7 Gene

Sequence variations from dbSNP and Humsavar for VENTXP7 Gene

SNP ID Clin Chr 03 pos Sequence Context AA Info Type MAF
rs366161 -- 21,406,033(+) ACCAC(A/G)GAGCA nc-transcript-variant
rs366609 -- 21,406,851(-) tgctg(A/G)tgaat downstream-variant-500B
rs371532 -- 21,405,845(-) GGCAG(G/T)CCTGG nc-transcript-variant
rs386371 -- 21,404,150(+) cacct(C/T)ggcct upstream-variant-2KB
rs398472 -- 21,404,824(-) tttca(G/T)ctttc upstream-variant-2KB

Structural Variations from Database of Genomic Variants (DGV) for VENTXP7 Gene

Variant ID Type Subtype PubMed ID
nsv834630 CNV Loss 17160897

Relevant External Links for VENTXP7 Gene

HapMap Linkage Disequilibrium report
VENTXP7

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot for VENTXP7 Gene

Disorders for VENTXP7 Gene

Relevant External Links for VENTXP7

Genetic Association Database (GAD)
VENTXP7
genes like me logo Genes that share disorders with VENTXP7: view

No data available for UniProtKB/Swiss-Prot for VENTXP7 Gene

Publications for VENTXP7 Gene

  1. Molecular cloning of a human Vent-like homeobox gene. (PMID: 11549314) Moretti P.A.B. … D'Andrea R.J. (Genomics 2001) 2 3 23
  2. Identification of homeobox genes expressed in human haemopoietic progenitor cells. (PMID: 7518789) Moretti P. … D'Andrea R. (Gene 1994) 3
  3. Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects. (PMID: 24324551) Deng X. … Seielstad M. (PLoS ONE 2013) 3
  4. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan R.S. … Benjamin E.J. (BMC Med. Genet. 2007) 48

Products for VENTXP7 Gene

  • QIAGEN qRT-PCR Assays for microRNAs that regulate VENTXP7
    • QuantiTect SYBR Green Assays in human,mouse,rat
    • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
    • QuantiFast Probe-based Assays in human,mouse,rat
    • Predesigned siRNA for gene silencing in human,mouse,rat for VENTXP7
    • Block miRNA regulation of VENTXP7 using miScript Target Protectors

    Sources for VENTXP7 Gene

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