Free for academic non-profit institutions. Other users need a Commercial license

VENTXP4 Gene(Pseudogene)

VENT Homeobox Pseudogene 4

GCID:
GC03M026363
GIFtS:
9
Genes Participants
UDN Logo

Aliases for VENTXP4 Gene

Aliases for VENTXP4 Gene

  • VENT Homeobox Pseudogene 4 2 3 5
  • VENT Homeobox (Xenopus Laevis) Pseudogene 4 2
  • VENT-Like Homeobox 2 Pseudogene 4 3
  • VENT Homeobox Homolog Pseudogene 3
  • VENTX2P4 3

External Ids for VENTXP4 Gene

Summaries for VENTXP4 Gene

Entrez Gene Summary for VENTXP4 Gene

  • Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the Vent homeobox gene family. [provided by RefSeq, Jul 2008]

GeneCards Summary for VENTXP4 Gene

VENTXP4 (VENT Homeobox Pseudogene 4) is a Pseudogene.

Additional gene information for VENTXP4 Gene

No data available for CIViC summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VENTXP4 Gene

Genomics for VENTXP4 Gene

Products:

  1. Regulatory Element

GeneHancer (GH) Regulatory Elements for VENTXP4 Gene

Promoters and enhancers for VENTXP4 Gene
GeneHancer (GH) Identifier GH Type GH
Score		 GH Sources Gene Association Score Total Score TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor
Binding Sites		 Gene Targets
GH03I026349 Enhancer 0.3 ENCODE 0.8 -2.9 -2945 1.4 ATF2 VENTXP4 GC03P026423
- Elite GeneHancer and/or Elite GeneHancer-gene association Download GeneHancer data dump

GeneHancers around VENTXP4 on UCSC Golden Path with GeneCards custom track

Genomic Locations for VENTXP4 Gene

Genomic Locations for VENTXP4 Gene
chr3:26,346,263-26,347,725
(GRCh38/hg38)
Size:
1,463 bases
Orientation:
Minus strand
chr3:26,387,754-26,389,216
(GRCh37/hg19)

Genomic View for VENTXP4 Gene

Genes around VENTXP4 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VENTXP4 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VENTXP4 Gene
GeneLoc Logo Genomic Neighborhood • Exon Structure • Gene Density

RefSeq DNA sequence for VENTXP4 Gene

Proteins for VENTXP4 Gene

Products:

  1. Antibody
  2. Protein
  3. Assay

Post-translational modifications for VENTXP4 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VENTXP4 Gene

Domains & Families for VENTXP4 Gene

Gene Families for VENTXP4 Gene

HGNC:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with VENTXP4: view

No data available for Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VENTXP4 Gene

Function for VENTXP4 Gene

Products:

  1. Animal Model
  2. CRISPR
  3. miRNA
  4. Inhibitory RNA
  5. Clone
  6. Cell Line

Phenotypes From GWAS Catalog for VENTXP4 Gene

Animal Model Products

Clone Products

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VENTXP4 Gene

Localization for VENTXP4 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS , Subcellular locations from the Human Protein Atlas (HPA) and Gene Ontology (GO) - Cellular Components for VENTXP4 Gene

Pathways & Interactions for VENTXP4 Gene

SuperPathways for VENTXP4 Gene

PathCards logo More details on SuperPathways for VENTXP4
No Data Available

Interacting Proteins for VENTXP4 Gene

Gene Ontology (GO) - Biological Process for VENTXP4 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VENTXP4 Gene

Drugs & Compounds for VENTXP4 Gene

Products:

  1. Drug
No Compound Related Data Available

Transcripts for VENTXP4 Gene

Products:

  1. CRISPR
  2. miRNA
  3. Inhibitory RNA
  4. Clone

mRNA/cDNA for VENTXP4 Gene

(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Clone Products

Alternative Splicing Database (ASD) splice patterns (SP) for VENTXP4 Gene

No ASD Table

Relevant External Links for VENTXP4 Gene

GeneLoc Exon Structure for
VENTXP4
ECgene alternative splicing isoforms for
VENTXP4

Expression for VENTXP4 Gene

Products:

  1. Primer

mRNA expression in normal human tissues from GTEx, Illumina, BioGPS, and CGAP SAGE for VENTXP4 Gene

mRNA expression in normal human tissues for VENTXP4 Gene
mRNA expression by GTEx for VENTXP4 Gene

NURSA nuclear receptor signaling pathways regulating expression of VENTXP4 Gene:

VENTXP4
genes like me logo Genes that share expression patterns with VENTXP4: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , mRNA differential expression in normal tissues , Protein differential expression in normal tissues , Protein expression , Protein tissue co-expression partners , mRNA Expression by UniProt/SwissProt , Evidence on tissue expression from TISSUES and Phenotype-based relationships between genes and organs from Gene ORGANizer for VENTXP4 Gene

Orthologs for VENTXP4 Gene

Evolution for VENTXP4 Gene

ENSEMBL:
Gene Tree for VENTXP4 (if available)
TreeFam:
Gene Tree for VENTXP4 (if available)

No data available for Orthologs for VENTXP4 Gene

Paralogs for VENTXP4 Gene

No data available for Paralogs for VENTXP4 Gene

Variants for VENTXP4 Gene

Additional Variant Information for VENTXP4 Gene

SNPedia medical, phenotypic, and genealogical associations of SNPs for
VENTXP4

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Sequence variations from dbSNP and Humsavar , Structural Variations from Database of Genomic Variants (DGV) and Variation tolerance for VENTXP4 Gene

Disorders for VENTXP4 Gene

Additional Disease Information for VENTXP4

Genetic Association Database
(GAD)

No disorders were found for VENTXP4 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for VENTXP4 Gene

Publications for VENTXP4 Gene

  1. Classification and nomenclature of all human homeobox genes. (PMID: 17963489) Holland PW … Bruford EA (BMC biology 2007) 3 58
  2. A genome-wide association study for blood lipid phenotypes in the Framingham Heart Study. (PMID: 17903299) Kathiresan S … Cupples LA (BMC medical genetics 2007) 44 58
  3. Genome-wide association of echocardiographic dimensions, brachial artery endothelial function and treadmill exercise responses in the Framingham Heart Study. (PMID: 17903301) Vasan RS … Benjamin EJ (BMC medical genetics 2007) 44 58

Products for VENTXP4 Gene

Sources for VENTXP4 Gene

Content
Loading form....