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Aliases for VENTXP1 Gene

Subcategory (RNA class) for VENTXP1 Gene


Aliases for VENTXP1 Gene

  • VENT Homeobox Pseudogene 1 2 3
  • Cancer/Testis Antigen 18 2 3 4
  • Tumor Antigen NA88A 2 3
  • CT18 3 4
  • VENT Homeobox (Xenopus Laevis) Pseudogene 1 2
  • VENT-Like Homeobox 2 Pseudogene 1 3
  • VENTX2P1 3
  • NA88A 3

External Ids for VENTXP1 Gene

ORGUL Members for VENTXP1 Gene

Previous GeneCards Identifiers for VENTXP1 Gene

  • GC0XP026337
  • GC0XP026486
  • GC0XP024315

Summaries for VENTXP1 Gene

Entrez Gene Summary for VENTXP1 Gene

  • Homeobox genes encode DNA-binding proteins, many of which are thought to be involved in early embryonic development. Homeobox genes encode a DNA-binding domain of 60 to 63 amino acids referred to as the homeodomain. This pseudogene is a member of the Vent homeobox gene family. [provided by RefSeq, Jul 2008]

GeneCards Summary for VENTXP1 Gene

VENTXP1 (VENT Homeobox Pseudogene 1) is a Pseudogene, and is affiliated with the lncRNA class.

No data available for UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VENTXP1 Gene

Genomics for VENTXP1 Gene

Regulatory Elements for VENTXP1 Gene

Genomic Location for VENTXP1 Gene

26,558,337 bp from pter
26,561,052 bp from pter
2,716 bases
Plus strand

Genomic View for VENTXP1 Gene

UCSC Golden Path with GeneCards custom track
Cytogenetic band:
Genomic Location for VENTXP1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VENTXP1 Gene

Proteins for VENTXP1 Gene

  • Protein details for VENTXP1 Gene (UniProtKB/Swiss-Prot)

    Protein Symbol:
    Recommended name:
    Putative tumor antigen NA88-A
    Protein Accession:

    Protein attributes for VENTXP1 Gene

    33 amino acids
    Molecular mass:
    3500 Da
    Quaternary structure:
    No Data Available

neXtProt entry for VENTXP1 Gene

Proteomics data for VENTXP1 Gene at MOPED

Post-translational modifications for VENTXP1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VENTXP1 Gene

Domains & Families for VENTXP1 Gene

Gene Families for VENTXP1 Gene

Protein Domains for VENTXP1 Gene


Suggested Antigen Peptide Sequences for VENTXP1 Gene

GenScript: Design optimal peptide antigens:

Graphical View of Domain Structure for InterPro Entry

genes like me logo Genes that share domains with VENTXP1: view

No data available for UniProtKB/Swiss-Prot for VENTXP1 Gene

Function for VENTXP1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VENTXP1 Gene

Localization for VENTXP1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for VENTXP1 Gene

Pathways & Interactions for VENTXP1 Gene

SuperPathways for VENTXP1 Gene

No Data Available

Interacting Proteins for VENTXP1 Gene

Gene Ontology (GO) - Biological Process for VENTXP1 Gene


No data available for Pathways by source and SIGNOR curated interactions for VENTXP1 Gene

Drugs & Compounds for VENTXP1 Gene

No Compound Related Data Available

Transcripts for VENTXP1 Gene

mRNA/cDNA for VENTXP1 Gene

(2) Selected AceView cDNA sequences:
(2) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Alternative Splicing Database (ASD) splice patterns (SP) for VENTXP1 Gene

No ASD Table

Relevant External Links for VENTXP1 Gene

GeneLoc Exon Structure for
ECgene alternative splicing isoforms for

Expression for VENTXP1 Gene

mRNA expression in normal human tissues for VENTXP1 Gene

mRNA differential expression in normal tissues according to GTEx for VENTXP1 Gene

This gene is overexpressed in Testis (x53.0).

SOURCE GeneReport for Unigene cluster for VENTXP1 Gene Hs.447377

mRNA Expression by UniProt/SwissProt for VENTXP1 Gene

Tissue specificity: Expressed in testis and melanoma cell lines.
genes like me logo Genes that share expression patterns with VENTXP1: view

Primer Products

  • QuantiTect SYBR Green Assays in human,mouse,rat
  • Pre-validated RT² qPCR Primer Assay in human,mouse,rat
  • QuantiFast Probe-based Assays in human,mouse,rat

In Situ Assay Products

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression and Protein tissue co-expression partners for VENTXP1 Gene

Orthologs for VENTXP1 Gene

Evolution for VENTXP1 Gene

Gene Tree for VENTXP1 (if available)
Gene Tree for VENTXP1 (if available)

No data available for Orthologs for VENTXP1 Gene

Paralogs for VENTXP1 Gene

No data available for Paralogs for VENTXP1 Gene

Variants for VENTXP1 Gene

Sequence variations from dbSNP and Humsavar for VENTXP1 Gene

SNP ID Clin Chr 0X pos Sequence Context AA Info Type MAF
rs4537454 -- 26,558,274(+) GCCCT(C/G)TCCAG upstream-variant-2KB
rs5944522 -- 26,556,885(+) GAATA(A/C)TATTC upstream-variant-2KB
rs5944523 -- 26,558,363(+) ACACA(C/T)GCGGT nc-transcript-variant
rs5944524 -- 26,559,056(+) AGTCT(A/G)GAAGT nc-transcript-variant
rs5944525 -- 26,559,147(+) CTGCA(C/T)GCACC nc-transcript-variant

Structural Variations from Database of Genomic Variants (DGV) for VENTXP1 Gene

Variant ID Type Subtype PubMed ID
nsv522405 CNV Gain 19592680
nsv525877 CNV Gain 19592680

Relevant External Links for VENTXP1 Gene

HapMap Linkage Disequilibrium report

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot and Variation tolerance for VENTXP1 Gene

Disorders for VENTXP1 Gene

Relevant External Links for VENTXP1

Genetic Association Database (GAD)
Atlas of Genetics and Cytogenetics in Oncology and Haematology:
genes like me logo Genes that share disorders with VENTXP1: view

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for VENTXP1 Gene

Publications for VENTXP1 Gene

  1. Genome-wide association study of monoamine metabolite levels in human cerebrospinal fluid. (PMID: 23319000) Luykx J.J. … Ophoff R.A. (Mol. Psychiatry 2013) 67
  2. Framingham Heart Study 100K project: genome-wide associations for cardiovascular disease outcomes. (PMID: 17903304) Larson M.G. … Levy D. (BMC Med. Genet. 2007) 67
  3. Molecular cloning of a human Vent-like homeobox gene. (PMID: 11549314) Moretti P.A.B. … D'Andrea R.J. (Genomics 2001) 67
  4. A processed pseudogene codes for a new antigen recognized by a CD8(+) T cell clone on melanoma. (PMID: 10790436) Moreau-Aubry A. … Breathnach R. (J. Exp. Med. 2000) 67

Products for VENTXP1 Gene

Sources for VENTXP1 Gene

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