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Aliases for VAV3-AS1 Gene

Subcategory (RNA class) for VAV3-AS1 Gene

non-coding RNA

Quality Score for this RNA gene is

3

Aliases for VAV3-AS1 Gene

  • VAV3 Antisense RNA 1 2 3 5
  • VAV3 Antisense RNA 1 (Non-Protein Coding) 2

External Ids for VAV3-AS1 Gene

Previous GeneCards Identifiers for VAV3-AS1 Gene

  • GC01P108508

Summaries for VAV3-AS1 Gene

GeneCards Summary for VAV3-AS1 Gene

VAV3-AS1 (VAV3 Antisense RNA 1) is an RNA Gene, and is affiliated with the non-coding RNA class.

No data available for Entrez Gene Summary , UniProtKB/Swiss-Prot , Tocris Summary , Gene Wiki entry , PharmGKB "VIP" Summary , fRNAdb sequence ontologies and piRNA Summary for VAV3-AS1 Gene

Genomics for VAV3-AS1 Gene

Regulatory Elements for VAV3-AS1 Gene

Enhancers for VAV3-AS1 Gene
GeneHancer Identifier Score Enhancer Sources TSS distance (kb) Number of Genes Away Size (kb) Transcription Factor Binding Sites within enhancer Other Gene Targets for Enhancer

Enhancers around VAV3-AS1 on UCSC Golden Path with GeneCards custom track

Promoters for VAV3-AS1 Gene
Ensembl Regulatory Elements (ENSRs) TSS Distance (bp) Size (bp) Binding Sites for Transcription Factors within promoters

ENSRs around VAV3-AS1 on UCSC Golden Path with GeneCards custom track

Genomic Location for VAV3-AS1 Gene

Chromosome:
1
Start:
107,964,443 bp from pter
End:
107,994,607 bp from pter
Size:
30,165 bases
Orientation:
Plus strand

Genomic View for VAV3-AS1 Gene

Genes around VAV3-AS1 on UCSC Golden Path with GeneCards custom track

Cytogenetic band:
VAV3-AS1 Gene in genomic location: bands according to Ensembl, locations according to GeneLoc (and/or Entrez Gene and/or Ensembl if different)
Genomic Location for VAV3-AS1 Gene
GeneLoc Logo Genomic Neighborhood Exon StructureGene Density

RefSeq DNA sequence for VAV3-AS1 Gene

Proteins for VAV3-AS1 Gene

Post-translational modifications for VAV3-AS1 Gene

No Post-translational modifications

No data available for DME Specific Peptides for VAV3-AS1 Gene

Domains & Families for VAV3-AS1 Gene

Graphical View of Domain Structure for InterPro Entry

No data available for Gene Families , Protein Domains , Suggested Antigen Peptide Sequences and UniProtKB/Swiss-Prot for VAV3-AS1 Gene

Function for VAV3-AS1 Gene

No data available for Molecular function , Enzyme Numbers (IUBMB) , Gene Ontology (GO) - Molecular Function , Phenotypes , Human Phenotype Ontology , Animal Models , miRNA , Transcription Factor Targets and HOMER Transcription for VAV3-AS1 Gene

Localization for VAV3-AS1 Gene

No data available for Subcellular locations from UniProtKB/Swiss-Prot , Subcellular locations from COMPARTMENTS and Gene Ontology (GO) - Cellular Components for VAV3-AS1 Gene

Pathways & Interactions for VAV3-AS1 Gene

SuperPathways for VAV3-AS1 Gene

No Data Available

Interacting Proteins for VAV3-AS1 Gene

Gene Ontology (GO) - Biological Process for VAV3-AS1 Gene

None

No data available for Pathways by source and SIGNOR curated interactions for VAV3-AS1 Gene

Drugs & Compounds for VAV3-AS1 Gene

No Compound Related Data Available

Transcripts for VAV3-AS1 Gene

mRNA/cDNA for VAV3-AS1 Gene

(1) Additional mRNA sequences :
(1) Ensembl transcripts including schematic representations, and UCSC links where relevant :

Unigene Clusters for VAV3-AS1 Gene

VAV3 antisense RNA 1:
Representative Sequences:

Alternative Splicing Database (ASD) splice patterns (SP) for VAV3-AS1 Gene

No ASD Table

Relevant External Links for VAV3-AS1 Gene

GeneLoc Exon Structure for
VAV3-AS1
ECgene alternative splicing isoforms for
VAV3-AS1

Expression for VAV3-AS1 Gene

mRNA expression in normal human tissues for VAV3-AS1 Gene

mRNA differential expression in normal tissues according to GTEx for VAV3-AS1 Gene

This gene is overexpressed in Spleen (x15.1) and Whole Blood (x10.6).

SOURCE GeneReport for Unigene cluster for VAV3-AS1 Gene Hs.568676

genes like me logo Genes that share expression patterns with VAV3-AS1: view

No data available for mRNA expression in embryonic tissues and stem cells from LifeMap Discovery , Protein differential expression in normal tissues , Protein expression , mRNA Expression by UniProt/SwissProt and Protein tissue co-expression partners for VAV3-AS1 Gene

Orthologs for VAV3-AS1 Gene

Evolution for VAV3-AS1 Gene

ENSEMBL:
Gene Tree for VAV3-AS1 (if available)
TreeFam:
Gene Tree for VAV3-AS1 (if available)

No data available for Orthologs for VAV3-AS1 Gene

Paralogs for VAV3-AS1 Gene

No data available for Paralogs for VAV3-AS1 Gene

Variants for VAV3-AS1 Gene

Sequence variations from dbSNP and Humsavar for VAV3-AS1 Gene

SNP ID Clin Chr 01 pos Sequence Context AA Info Type
rs73143 -- 107,976,248(-) GCCAG(A/C)ACAAA intron-variant
rs168275 -- 107,973,692(-) TTACT(C/T)TCACC intron-variant
rs345250 -- 107,974,799(-) ctgct(C/T)ccacc intron-variant
rs345251 -- 107,974,773(-) gcaac(A/C)accat intron-variant
rs345252 -- 107,974,753(-) tccct(A/G)tgaat intron-variant

No data available for Polymorphic Variants from UniProtKB/Swiss-Prot , Structural Variations from Database of Genomic Variants (DGV) , Variation tolerance and Relevant External Links for VAV3-AS1 Gene

Disorders for VAV3-AS1 Gene

Relevant External Links for VAV3-AS1

Atlas of Genetics and Cytogenetics in Oncology and Haematology:
VAV3-AS1

No disorders were found for VAV3-AS1 Gene.

No data available for MalaCards , UniProtKB/Swiss-Prot and Genatlas for VAV3-AS1 Gene

Publications for VAV3-AS1 Gene

  1. Creation of genome-wide protein expression libraries using random activation of gene expression. (PMID: 11329013) Harrington J.J. … Ducar M. (Nat. Biotechnol. 2001) 3 67

Products for VAV3-AS1 Gene

Sources for VAV3-AS1 Gene

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