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Aliases & Descriptions for VAV3
(According to
1 HGNC ,
2 Entrez Gene ,
3 UniProtKB/Swiss-Prot ,
4 UniProtKB/TrEMBL , 5 OMIM , 6 GeneLoc
, and/or 7 Ensembl ,
8 miRBase )About This Section
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Aliases FLJ40431 2 OTTHUMP00000012665 2 VAV-3 3
Descriptions vav 3 guanine nucleotide exchange factor 2 vav 3 oncogene 1 , 2
Search outside databases for aliases for VAV3 genePrevious GC identifers: GC01M108614 GC01M107096 GC01M107270 GC01M107468 GC01M107825
Summaries for VAV3 (According to Entrez Gene ,
Wikipedia's
Gene Wiki ,
UniProtKB/Swiss-Prot ,
and/or
UniProtKB/TrEMBL )
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EntrezGene summary for VAV3 : This gene is a member of the VAV gene family. The VAV proteins are guanine nucleotide exchangefactors (GEFs) for Rho family GTPases that activate pathways leading to actin cytoskeletalrearrangements and transcriptional alterations. This gene product acts as a GEF preferentially forRhoG, RhoA, and to a lesser extent, RAC1, and it associates maximally with the nucleotide-freestates of these GTPases. Alternatively spliced transcript variants encoding different isoformshave been described for this gene. [provided by RefSeq] UniProtKB/Swiss-Prot: VAV3_HUMAN, Q9UKW4 Function : Exchange factor for GTP-binding proteins RhoA, RhoG and, to a lesser extent, Rac1. Bindsphysically to the nucleotide-free states of those GTPases
Gene Wiki entry for VAV3
Genomic Location for VAV3
(According to
GeneLoc and/or
HGNC , and/or
Entrez Gene (NCBI build 36) ,
and/or miRBase ,
Genomic Views according to
UCSC and
Ensembl ,
Transcription factor binding sites according to
SABiosciences )About This Section
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Genomic View : UCSC Golden Path with GeneCards custom track Transcription factor binding sites upstream to the VAV3 gene Entrez Gene cytogenetic band: 1p13.3 Ensembl cytogenetic band: 1p13.3 HGNC cytogenetic band: 1p13.3 VAV3 Gene in genomic location: bands according to Ensembl, locations according to
(and/or Entrez Gene and/or Ensembl if different) GeneLoc gene densities for chromosome 1 GeneLoc Exon Structure
GeneLoc location for GC01M107915:
(about GC identifiers )
Start:
107,915,305 bp from pter
End:
108,309,068 bp from pter
Size:
393,764 bases
Orientation:
minus strand
RefSeq DNA sequence: NC_000001.9 NT_019273.18 Proteins for VAV3
(According to
1 UniProtKB ,
and/or Ensembl ,
Phosphorylation sites according to 2 Phosphosite ,
RefSeq according to NCBI ,
PDB rendering according to OCA and/or Proteopedia ,
Recombinant Proteins
from Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Enzo Life Sciences ,
Abnova ,
OriGene and/or,
Abcam ,
Biochemical Assays by
Invitrogen ,
Millipore ,
R&D Systems ,
Cell Signaling Technology , and/or
Enzo Life Sciences ,
Ontologies according to Gene
Ontology Consortium 01 Apr 2009 and
Entrez Gene ,
Antibodies by Invitrogen ,
Millipore ,
Sigma-Aldrich ,
R&D Systems ,
Cell Signaling Technology ,
Abcam ,
Abnova , and/or
Novus Biologicals )
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UniProtKB/Swiss-Prot: VAV3_HUMAN, Q9UKW4 (See
protein sequence )Recommended Name: Guanine nucleotide exchange factor VAV3 Size : 847 amino acids; 97776 Da
Subunit : Interacts with the PH domain of APS
PDB structures from and Proteopedia : 2D86 (3D)
 
Secondary accessions : B1AMM0 O95230 Q9Y5X8Alternative splicing : 2 isoforms : Q9UKW4-1 Q9UKW4-2
Post-translational modifications:
View phosphorylation sites using PhosphoSite 2
REFSEQ proteins (2 alternative transcripts):
NP_001073343.1 NP_006104.4 ENSEMBL proteins: ENSP00000359073 ENSP00000344267 Human Recombinant Proteins Browse Origene for full length recombinant human proteins expressed in human HEK293 cells 1 Gene Ontology (GO) cellular component term (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0005622 intracellular
IEA --
About this table Antibodies for VAV3: Assays for VAV3:
Protein
Domains/ Families for VAV3(According to InterPro , ProtoNet ,
UniProtKB , and/or BLOCKS ,
Sets of similar genes according to GeneDecks )
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Graphical View of Domain Structure for InterPro Entry Q9UKW4 ProtoNet protein and cluster: Q9UKW4
5/6 Blocks protein families (see all 6
): IPB000219 DH domain IPB000980 SH2 domain signature IPB001452 SH3 domain signature IPB001715 Calponin-like actin-binding IPB001849 Pleckstrin-like UniProtKB/Swiss-Prot: VAV3_HUMAN, Q9UKW4 Similarity : Contains 1 CH (calponin-homology) domainSimilarity : Contains 1 DH (DBL-homology) domainSimilarity : Contains 1 PH domainSimilarity : Contains 1 phorbol-ester/DAG-type zinc fingerSimilarity : Contains 1 SH2 domainSimilarity : Contains 2 SH3 domains
Gene Function for VAV3
(According to MGI Jun 06 2009, UniProtKB ,
IUBMB ,and/or Genatlas ,
shRNA from
OriGene ,
Sigma-Aldrich , RNAi from
Sigma-Aldrich ,
RNAi Products ,
Clones , and
Q-PCR Products
from Invitrogen ,
Millipore ,
OriGene , and/or
Abnova ,
siRNAs from
Applied Biosystems ,
SYBR primers from OriGene ,
Cell-based Assays from Millipore ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001079874 Applied Biosystems Silencer ® siRNAs for VAV3 Sigma-Aldrich siRNA and siRNA Panels for VAV3 Sigma-Aldrich shRNA for VAV3 Explore Sigma-Aldrich super-pooled esiRNAs                OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001079874                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001079874                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001079874  Primers: Browse
Quantitative PCR Central at Invitrogen for Q-PCR LUX™ Primers               OriGene genome-wide validated SYBR primer pairs: NM_006113 UniProtKB/Swiss-Prot: VAV3_HUMAN, Q9UKW4 Function : Exchange factor for GTP-binding proteins RhoA, RhoG and, to a lesser extent, Rac1. Bindsphysically to the nucleotide-free states of those GTPases
8 MGI mutant phenotypes (inferred from 2 alleles ) (MGI details for Vav3) :5/8 Gene Ontology (GO) molecular function terms (links to tree view) (see all 8
):
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Pathways & Interactions for VAV3
(Pathways according to Invitrogen
(maps by GeneGo ),
Millipore ,
Cell Signaling Technology ,
Sigma-Aldrich ,
KEGG
and/or UniProtKB ,
Sets of similar genes according to GeneDecks ,
Proteins Network according to
SABiosciences ,
Interactions according to 1 UniProtKB ,
2 MINT , and/or
3 STRING ,
with links to IntAct and
Ensembl ,
Ontologies according to Gene Ontology Consortium 01 Apr 2009 via
Entrez Gene .)
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5/7 Sigma-Aldrich "Your Favorite Gene" Pathways for VAV3 (Your Favorite Gene powered by Ingenuity) (see all 7
) Gene Network CentralTM Interacting Genes and Proteins Network for VAV3 5/103 Interacting proteins for VAV3 (ENSP00000359073 3 Q9UKW4 1 , 2 ) via UniProtKB, MINT, and/or STRING (see all 103
)About this table 2 Gene Ontology (GO) biological process terms (links to tree view) :
GO ID Qualified GO term Evidence PubMed IDs GO:0007264 small GTPase mediated signal transduction
TAS 10523675 GO:0035023 regulation of Rho protein signal transduction
IEA --
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Drugs & Compounds for VAV3 (Chemical Compounds according to UniProtKB , Enzo Life Sciences ,
Sigma-Aldrich , Tocris Bioscience , and/or
Novoseek and Drugs according to
Enzo Life Sciences and/or
PharmGKB )
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Browse Tocris compounds for VAV3 2 Novoseek chemical compound relationships for VAV3 gene
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Transcripts for VAV3(GenBank/EMBL/DDBJ Accessions according to
Unigene
(Build 219 Homo sapiens; Jun 2 2009) or GenBank , RefSeq according to Entrez Gene ,
DOTS (version 10), and/or
AceView ,
non coding RNAs according to
RNAdb ,
ESTs according to GeneTide ,
exon structure from GeneLoc ,
alternative splicing isoforms according to ASD and/or
ECgene ,
RNAi Products from Invitrogen ,
Millipore , and/or
Abnova ,
siRNAs from Applied Biosystems ,
Sigma-Aldrich ,
shRNA from
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OriGene ,
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               OriGene 29mer shRNA kit in GFP-retroviral vectors (see all 2 ): NM_001079874 Sigma-Aldrich siRNA and siRNA Panels for VAV3 Sigma-Aldrich shRNA for VAV3 Explore Sigma-Aldrich super-pooled esiRNAs
Applied Biosystems Silencer ® siRNAs: NM_001079874 NM_006113
REFSEQ mRNAs for VAV3 gene (2 alternative transcripts): NM_001079874.1 NM_006113.4
Applied Biosystems TaqMan ® Gene Expression Assays: NM_001079874 NM_006113
               OriGene GFP tagged cDNA clones in CMV expression vector (see all 2 ): NM_001079874                                  Myc/DDK tagged cDNA clones in CMV expression vector (see all 2 ): NM_001079874                                  untagged cDNA clones in CMV expression vector (see all 2 ): NM_001079874  
Additional cDNA sequence: AF035442.1 AF067817.1 AF118886.1 AF118887.1 AK097750.1 AK295166.1 AK296537.1 AK300474.1 AK304088.1 AK316295.1 BC143969.1 CR611410.1
7 DOTS entries : DT.86855598 DT.92425147 DT.100020626 DT.91823929 DT.121425328 DT.121425340 DT.95178726
6 AceView cDNA sequences :AL713081 BP360870 BU175456 BF509808 AW296135 AI672033
highest scoring ESTs for VAV3 :AF067817 AF118887 AW296135 BF509808 W91952 AA468526 AA488848 AA488919 AA514367 AA574117
Unigene Cluster for VAV3: Vav 3 guanine nucleotide exchange factor Hs.267659 [show with all ESTs ] Unigene Representative Sequence: NM_006113 GeneLoc Exon Structure 2 Alternative Splicing Database (ASD) splice patterns (SP) for VAV3 ExUns: 1 ^ 2 ^ 3 ^ 4 ^ 5 ^ 6 ^ 7 ^ 8 ^ 9 ^ 10 ^ 11 ^ 12 ^ 13 ^ 14 ^ 15 ^ 16 ^ 17 ^ 18 ^ 19 ^ 20 ^ 21 ^ 22 ^ 23 ^ 24 ^ 25 ^ 26 ^ SP1 :   -       -                                   -           SP2 :                                                    
ExUns: 27 ^ 28 ^ 29 ^ 30 SP1 :         SP2 :        
About this scheme ECgene alternative splicing isoforms for VAV3 2 Ensembl transcripts including schematic representations : ENST00000370056
ENST00000343258
Expression for VAV3
(Experimental results according to
1 GeneNote
and GNF BioGPS ,
probe sets-to-genes annotations according to
2 GeneAnnot ,
3 GeneTide ,
Sets of similar genes according to GeneDecks ,
Electronic Northern calculations according to data from
UniGene (Build 219 Homo sapiens),
SAGE tags according to
CGAP ,
plus additional links to
SOURCE , and/or
GNF
BioGPS , and/or
EXPOLDB , and/or
UniProtKB ,
Expression Assays from
Applied Biosystems
)
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VAV3 expression in normal and diseased human tissues Applied Biosystems TaqMan ® Gene Expression Assays for VAV3 1 / 2 / 3
8 probe-sets matching VAV3 gene Data from
(Publications) and GNF BioGPS About these images About these images CGAP SAGE TAG: GGCCTGGGGGSOURCE GeneReport for Unigene cluster: Hs.267659
Orthologs for VAV3
(Orthologs according to
1,2 HomoloGene (2 older version, for species not in 1 newer version),
3 euGenes ,
4 SGD
and/or
5 MGI Jun 06 2009,
with possible further links to
Flybase
and/or
WormBase ,
Gene Trees according to Ensembl )
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Orthologs for VAV3 gene from 5/7 species (see all 7
)
About this table Species with no ortholog for VAV3 ENSEMBL Gene Tree for VAV3 Paralogs for VAV3 (Paralogs according to 1 HomoloGene and 2 Ensembl , Pseudogenes according to 3 Pseudogene.org )About This Section
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Paralogs for VAV3 gene VAV1 2 TIAM2 2 VAV2 2
SNPs/Variants for VAV3 (According to the
1 NCBI SNP Database ,
2 Ensembl ,
3 PupaSUITE , and
UniProtKB ,
Linkage Disequilibrium by HapMap ,
Genotyping Reagents from
Applied Biosystems )
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HapMap Linkage Disequilibrium images for VAV3 (up to first 250kb)
Disorders & Mutations for VAV3
(in which this Gene is Involved, According to
OMIM, UniProtKB ,
Novoseek , PharmGKB ,
Genatlas , GeneTests ,
Blood group antigen gene mutations by BGMUT ,
HGMD, GAD ,
HuGE Navigator ,
BCGD ,
and/or TGDB .)
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OMIM: 605541 1 Novoseek disease relationship for VAV3 gene
About this table Human Genome Epidemiology Navigator: VAV3 (2 documents)
Medical News for VAV3 (Possibly Related Articles in
Doctor's Guide )
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Publications for VAV3 (in
PubMed .
Associations of this gene to articles via
1 Novoseek ,
2 HGNC ,
3 Entrez Gene ,
4 UniProtKB/Swiss-Prot ,
5 UniProtKB/TrEMBL ,
6 GAD , and/or
7 PharmGKB )
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10/33 PubMed articles for VAV3 gene (see all 33
): Biological and regulatory properties of Vav-3, a new member of the Vav family of oncoproteins. (PubMed id 10523675) 1, 3, 4 Movilla N. and Bustelo X.R. (1999) Adaptor protein APS binds the NH2-terminal autoinhibitory domain of guanine nucleotide exchange factor Vav3 and augments its activity. (PubMed id 12400014) 1, 3, 4 Yabana N. and Shibuya M. (2002) Non-stoichiometric reduced complexity probes for cDNA arrays. (PubMed id 9705494) 3, 4 Trenkle T.... McClelland M. (1998) Vav3 oncogene activates estrogen receptor and its overexpression may be involved in human breast cancer. (PubMed id 18518979) 1, 3 Lee K....Lu S. (2008) Vav3, a Rho GTPase guanine nucleotide exchange factor, increases during progression to androgen independence in prostate cancer cells and potentiates androgen receptor transcriptional activity. (PubMed id 16384856) 1, 3 Lyons L.S. and Burnstein K.L. (2006) Membrane localization and function of Vav3 in T cells depend on its association with the adapter SLP-76. (PubMed id 15708849) 1, 3 Charvet C....Altman A. (2005) Vav3 oncogene is overexpressed and regulates cell growth and androgen receptor activity in human prostate cancer. (PubMed id 16762975) 1, 3 Dong Z....Lu S. (2006) Ligand-independent activation of androgen receptors by Rho GTPase signaling in prostate cancer. (PubMed id 18079321) 1, 3 Lyons L.S....Burnstein K.L. (2008) Vav3 modulates B cell receptor responses by regulating phosphoinositide 3-kinase activation. (PubMed id 11805146) 1, 3 Inabe K....Kurosaki T. (2002) The guanine nucleotide exchange factors trio, Ect2, and Vav3 mediate the invasive behavior of glioblastoma. (PubMed id 19008376) 1, 3 Salhia B....Rutka J.T. (2008)
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Genome Databases showing VAV3
(According to
Entrez Gene ,
HGNC ,
AceView ,
euGenes ,
Ensembl ,
miRBase ,
ECgene ,
and/or
H-InvDB )
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Other Databases showing VAV3
(According to HUGE )
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Specialized Databases showing VAV3 (According to ATLAS , HORDE , IMGT , MTDB, LEIDEN , UniProtKB/Swiss-Prot , and/or UniProtKB/TrEMBL ,Wikipedia and/or GeneReviews via UniProtKB/Swiss-Prot )About This Section
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-- Services for VAV3 (Reagents available from Applied Biosystems , Antibodies and assays by Cell
Signaling Technology , Abcam , Novus Biologicals ,Sigma-Aldrich , R&D Systems , Millipore , Abnova , and/or Invitrogen , Clones available from OriGene ,and/or Invitrogen , Drugs and/or compounds by Sigma-Aldrich , Enzo Life Sciences , and/or Tocris Bioscience )About This Section
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